Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797581
Identifier: 108797581
GI number: 108797581
Start: 661448
End: 662536
Strand: Reverse
Name: 108797581
Synonym: Mmcs_0601
Alternate gene names: NA
Gene position: 662536-661448 (Counterclockwise)
Preceding gene: 108797582
Following gene: 108797576
Centisome position: 11.61
GC content: 68.5
Gene sequence:
>1089_bases ATGGTCACGCTCGATGAGTTCTCGCGCCTAGTCTCGGCGATCCACGACGCCGCGGTCACGCCCGACCGCTGGGTGGACAC GATGACCGACGTGCGCCACTCGCTCGGCGCGATCACCGGGGCGATGCTGATCGCCGACGATGTGGGGCGGGCGGCCGACC GGGCCAGCCTTCCGCCGGACGCCCACCGCACCTACCGCGAGTACTACCACCGGATCGACTACGTGCTCGAAGCGGTCGAG CGTGGCCCGGTCGGCTTGATCCACAGCGGGCGGCAGCTGATCGAGCAGGACGAGCGCTCGGAGTTCAACGTCGACTGGAT CCGGCCCAATCACATGGACGACGGGATGTTCGTCCGGCTGACCGGCAACGACCATCCCGCCTGTTTCATCGTCGCCAACC CGCGGCGCGACGAATCCTTCGTGACCACCGAACGCGCGGAACTCGTCACCGCCCTCGTCCCCCACTTCCAGCAGGCCTTG CGCACCGAGAAGCACCTCGCCGAGCTCAGACGCGACGCCGGTGACCTGGCCGGGGCGATCGACAGCATGCGGCAGGCCGT TCTGGTCACCGGCGTGAACGGCATTGTCCTGCACAGCAATGCGGCATGCGACGCGCTGATACACCGCGCCGACGGGCTCA CCGTCCGATCGGGCCGGCTGTGCGCCTTCCGCTCTGATGTGGACTGTGCGGTACAACGCGCGCTGGCCGACGCGCTCGGG ATGAACGAGGCCGGGGCCCGCTTCGGCACGTCGGTGCTGTGCCCGCGGCCGTCGGGTGACCGGGCGTATGTCGCACACGC CTTCCCGTTCCCCAACCGGGAGGGCGAGCCGAGAGCGATCGTCGTGATCGTCGATCCCGACCACCGGCCTCAACCACCGA AGGACATGCTGCGCAACTTGTTCGGCCTCACCAACGGCGAAGCCGACGTCGCGCTGCGGGTCGCGAACGGTCAGGGTCTC GCGCCCATCTCCGACGAATTGTCGGTCTCGCTCGCGACGGTCAAGACCCACCTGCAGCACGTGTTCGACAAGACCGACAC TCACCGGCAGGCCGAGCTGGTCCGTCTCCTCACCGCCCTGCTGCCGTGA
Upstream 100 bases:
>100_bases CCGCTCACCCGTGCTGTCAGCGGGCCGGTCAGGACTTACAGTCGGTGTACGCACGATCGGGGGTCGCGATGAATTGGGTT GTCCGTACGGGGTACCGGCG
Downstream 100 bases:
>100_bases GGACCGGCGCGCCGTCGCCCACCGGGGTCGCGCGCCGGCGCTGACCCCGCGCCACCCGGGCCAGCGTCGCCGGATGCACC AACTGTGCGGGCGGGGCCAC
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator; Regulatory Protein LuxR; Transcriptional Regulator LuxR Family Protein; Response Regulator Receiver Domain-Containing Protein; CheY-Like Receiver; LuxR-Family Transcriptional Regulator; Two-Component Response Regulator Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MVTLDEFSRLVSAIHDAAVTPDRWVDTMTDVRHSLGAITGAMLIADDVGRAADRASLPPDAHRTYREYYHRIDYVLEAVE RGPVGLIHSGRQLIEQDERSEFNVDWIRPNHMDDGMFVRLTGNDHPACFIVANPRRDESFVTTERAELVTALVPHFQQAL RTEKHLAELRRDAGDLAGAIDSMRQAVLVTGVNGIVLHSNAACDALIHRADGLTVRSGRLCAFRSDVDCAVQRALADALG MNEAGARFGTSVLCPRPSGDRAYVAHAFPFPNREGEPRAIVVIVDPDHRPQPPKDMLRNLFGLTNGEADVALRVANGQGL APISDELSVSLATVKTHLQHVFDKTDTHRQAELVRLLTALLP
Sequences:
>Translated_362_residues MVTLDEFSRLVSAIHDAAVTPDRWVDTMTDVRHSLGAITGAMLIADDVGRAADRASLPPDAHRTYREYYHRIDYVLEAVE RGPVGLIHSGRQLIEQDERSEFNVDWIRPNHMDDGMFVRLTGNDHPACFIVANPRRDESFVTTERAELVTALVPHFQQAL RTEKHLAELRRDAGDLAGAIDSMRQAVLVTGVNGIVLHSNAACDALIHRADGLTVRSGRLCAFRSDVDCAVQRALADALG MNEAGARFGTSVLCPRPSGDRAYVAHAFPFPNREGEPRAIVVIVDPDHRPQPPKDMLRNLFGLTNGEADVALRVANGQGL APISDELSVSLATVKTHLQHVFDKTDTHRQAELVRLLTALLP >Mature_362_residues MVTLDEFSRLVSAIHDAAVTPDRWVDTMTDVRHSLGAITGAMLIADDVGRAADRASLPPDAHRTYREYYHRIDYVLEAVE RGPVGLIHSGRQLIEQDERSEFNVDWIRPNHMDDGMFVRLTGNDHPACFIVANPRRDESFVTTERAELVTALVPHFQQAL RTEKHLAELRRDAGDLAGAIDSMRQAVLVTGVNGIVLHSNAACDALIHRADGLTVRSGRLCAFRSDVDCAVQRALADALG MNEAGARFGTSVLCPRPSGDRAYVAHAFPFPNREGEPRAIVVIVDPDHRPQPPKDMLRNLFGLTNGEADVALRVANGQGL APISDELSVSLATVKTHLQHVFDKTDTHRQAELVRLLTALLP
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39814; Mature: 39814
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLDEFSRLVSAIHDAAVTPDRWVDTMTDVRHSLGAITGAMLIADDVGRAADRASLPPD CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCH AHRTYREYYHRIDYVLEAVERGPVGLIHSGRQLIEQDERSEFNVDWIRPNHMDDGMFVRL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEE TGNDHPACFIVANPRRDESFVTTERAELVTALVPHFQQALRTEKHLAELRRDAGDLAGAI ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSMRQAVLVTGVNGIVLHSNAACDALIHRADGLTVRSGRLCAFRSDVDCAVQRALADALG HHHHHEEEEECCCEEEEECCCHHHHHHHHCCCCEEECCCEEEECCCHHHHHHHHHHHHHC MNEAGARFGTSVLCPRPSGDRAYVAHAFPFPNREGEPRAIVVIVDPDHRPQPPKDMLRNL CCCCCHHCCCEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHH FGLTNGEADVALRVANGQGLAPISDELSVSLATVKTHLQHVFDKTDTHRQAELVRLLTAL HCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LP CC >Mature Secondary Structure MVTLDEFSRLVSAIHDAAVTPDRWVDTMTDVRHSLGAITGAMLIADDVGRAADRASLPPD CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCH AHRTYREYYHRIDYVLEAVERGPVGLIHSGRQLIEQDERSEFNVDWIRPNHMDDGMFVRL HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEEE TGNDHPACFIVANPRRDESFVTTERAELVTALVPHFQQALRTEKHLAELRRDAGDLAGAI ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DSMRQAVLVTGVNGIVLHSNAACDALIHRADGLTVRSGRLCAFRSDVDCAVQRALADALG HHHHHEEEEECCCEEEEECCCHHHHHHHHCCCCEEECCCEEEECCCHHHHHHHHHHHHHC MNEAGARFGTSVLCPRPSGDRAYVAHAFPFPNREGEPRAIVVIVDPDHRPQPPKDMLRNL CCCCCHHCCCEEECCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHH FGLTNGEADVALRVANGQGLAPISDELSVSLATVKTHLQHVFDKTDTHRQAELVRLLTAL HCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA