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The map label for this gene is 108797582

Identifier: 108797582

GI number: 108797582

Start: 662669

End: 664351

Strand: Reverse

Name: 108797582

Synonym: Mmcs_0602

Alternate gene names: NA

Gene position: 664351-662669 (Counterclockwise)

Preceding gene: 108797584

Following gene: 108797581

Centisome position: 11.64

GC content: 69.99

Gene sequence:

>1683_bases
GTGCGGGCTTATGCAGCGCCCGACACCCAGGCTTTACGTGGCTGGCAGCGTCGGGCATTGGTGCGGTATCTTGGCGCCAA
GCCGCGTGACTTCCTGGCGGTCGCCACCCCCGGTGCAGGTAAGACCACGTTTGCCCTGCGCATCGCGGGTGAGCTACTGG
CCGACGGCACCGTCGAACGCGTCACGGTGGTGGTGCCGACCGAGCACCTCAAGATCCAGTGGGCGCAGGCGGCCGCGCGG
TCCGGTATCGCCCTGGACCCGAAGTTCAGCAACTCCTCGGCGCAGACGTCGTCGGAGTACCACGGTGTCGTGGTCACCTA
CGCCCAGGTGGCCAGCCACCCCACCCGGCACCGGGTGCGCACGGAGAACTACCGGACCCTGGTCATCTTCGACGAGATCC
ACCACGGCGGGGACGCCAAGACGTGGGGTGACGCGATGCGCGAGGCGTTCAGCGACGCCACCCGCCGCCTGTCGTTGACC
GGGACGCCCTTCCGCAGCGACGACAGCCCCATCCCGTTCGTGAACTACGTCCCGGACGCCGAAGGTTTGCTGCGCTCGGA
GTCCGACCACACCTACGGCTATGCCGACGCACTGGCCGACGGGGTGGTGCGCCCGGTGATCTTCCTCGCCTACTCCGGCG
AGGCGCGGTGGCGCAGCAGCGCGGGTGAAGAGCACGCCGCCCGCCTCGGCGAGCCGCTGAACGCCGAACAGACCGCGCGG
GCCTGGCGCACCGTCCTCGACGCGAACGGCGAGTGGATCCCGGCGGTGCTCAAGGCCGCGGACACCCGGCTGCGCCAGCT
GCGCGCGGGAGGTATGCCCGACGCCGGGGCCATGATCATCGCGACCGATCAGACCGCCGCCCGCCAGTACGCGGCGCTGC
TGACGAAGATGACCGGTGAGGCGCCGACGCTGGTGCTCTCCGACGATCCGGGGTCGTCGGCGCGGATCGCGGAGTACTCG
GCCGGCGACACGCCGTGGCTGGTGGCGGTCCGGATGGTGTCCGAGGGGGTCGACGTGCCGCGCCTGGCGGTCGGCGTCTA
CGCCACCAGCGCATCGACCCCGTTGTTCTTCGCCCAGGCGATCGGGCGCTTCGTGCGGTCGCGACGCCCCGGTGAGACCG
CCAGCATTTTCGTGCCCTCGGTGCCGACGCTGCTCGACCTGGCCAGCCAGATGGAGGCCCAGCGCGACCATGTGCTCGGC
AAACCCCACCGTGAGTCGATGGGTGACGAGGAGCTCGTCGAACGCCGCCGCAGCGAACCCACCGAAGAGGACCGGGGGTT
CGAATCACTGGGCGCCAGCGCCGAACTCGACCAGGTGATCTTCGACGGGGCGTCCTTCGGCACCGCCACGCCCGCGGGCA
GCGAGGAAGAGGCCGACTACCTCGGTATACCGGGTCTGCTCGATGCCGATCAGATGCGAGACCTGTTGCGGCGCAGGCAG
GAAGAGCAGCTGACCAGACGCACCGCGTCGGGTGAGCCGCCGCCGGTGACGCCGTACGGCCAGCTTCGCGAGCTGCGTCA
GGAGCTCAACACGCTGGTGTCGCTGGCGCATCACCGGCTCAACAAACCGCACGGATGGATACACAACGAACTGCGCCGGA
TCTGCGGCGGGCCACCGGTGGCCGCAGCGACGTCGGATCAGTTGCAGGCCAGGATCGCGGCGGTGCGCACGCTCAAGGCG
TGA

Upstream 100 bases:

>100_bases
CGAAGGGCGACACACCGTCTGTCCGGCGACTCGCCAAGCAGAGATGCGCGGCCGGAATCCGTTGCGCTAGGCTGCTGTCC
GATCAGTGAGGAGTCTTTGG

Downstream 100 bases:

>100_bases
CCGGTGGGGCGTCTGTTGCCGATGTAAGCAGTCCGCTCACCCGTGCTGTCAGCGGGCCGGTCAGGACTTACAGTCGGTGT
ACGCACGATCGGGGGTCGCG

Product: type III restriction enzyme, res subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MRAYAAPDTQALRGWQRRALVRYLGAKPRDFLAVATPGAGKTTFALRIAGELLADGTVERVTVVVPTEHLKIQWAQAAAR
SGIALDPKFSNSSAQTSSEYHGVVVTYAQVASHPTRHRVRTENYRTLVIFDEIHHGGDAKTWGDAMREAFSDATRRLSLT
GTPFRSDDSPIPFVNYVPDAEGLLRSESDHTYGYADALADGVVRPVIFLAYSGEARWRSSAGEEHAARLGEPLNAEQTAR
AWRTVLDANGEWIPAVLKAADTRLRQLRAGGMPDAGAMIIATDQTAARQYAALLTKMTGEAPTLVLSDDPGSSARIAEYS
AGDTPWLVAVRMVSEGVDVPRLAVGVYATSASTPLFFAQAIGRFVRSRRPGETASIFVPSVPTLLDLASQMEAQRDHVLG
KPHRESMGDEELVERRRSEPTEEDRGFESLGASAELDQVIFDGASFGTATPAGSEEEADYLGIPGLLDADQMRDLLRRRQ
EEQLTRRTASGEPPPVTPYGQLRELRQELNTLVSLAHHRLNKPHGWIHNELRRICGGPPVAAATSDQLQARIAAVRTLKA

Sequences:

>Translated_560_residues
MRAYAAPDTQALRGWQRRALVRYLGAKPRDFLAVATPGAGKTTFALRIAGELLADGTVERVTVVVPTEHLKIQWAQAAAR
SGIALDPKFSNSSAQTSSEYHGVVVTYAQVASHPTRHRVRTENYRTLVIFDEIHHGGDAKTWGDAMREAFSDATRRLSLT
GTPFRSDDSPIPFVNYVPDAEGLLRSESDHTYGYADALADGVVRPVIFLAYSGEARWRSSAGEEHAARLGEPLNAEQTAR
AWRTVLDANGEWIPAVLKAADTRLRQLRAGGMPDAGAMIIATDQTAARQYAALLTKMTGEAPTLVLSDDPGSSARIAEYS
AGDTPWLVAVRMVSEGVDVPRLAVGVYATSASTPLFFAQAIGRFVRSRRPGETASIFVPSVPTLLDLASQMEAQRDHVLG
KPHRESMGDEELVERRRSEPTEEDRGFESLGASAELDQVIFDGASFGTATPAGSEEEADYLGIPGLLDADQMRDLLRRRQ
EEQLTRRTASGEPPPVTPYGQLRELRQELNTLVSLAHHRLNKPHGWIHNELRRICGGPPVAAATSDQLQARIAAVRTLKA
>Mature_560_residues
MRAYAAPDTQALRGWQRRALVRYLGAKPRDFLAVATPGAGKTTFALRIAGELLADGTVERVTVVVPTEHLKIQWAQAAAR
SGIALDPKFSNSSAQTSSEYHGVVVTYAQVASHPTRHRVRTENYRTLVIFDEIHHGGDAKTWGDAMREAFSDATRRLSLT
GTPFRSDDSPIPFVNYVPDAEGLLRSESDHTYGYADALADGVVRPVIFLAYSGEARWRSSAGEEHAARLGEPLNAEQTAR
AWRTVLDANGEWIPAVLKAADTRLRQLRAGGMPDAGAMIIATDQTAARQYAALLTKMTGEAPTLVLSDDPGSSARIAEYS
AGDTPWLVAVRMVSEGVDVPRLAVGVYATSASTPLFFAQAIGRFVRSRRPGETASIFVPSVPTLLDLASQMEAQRDHVLG
KPHRESMGDEELVERRRSEPTEEDRGFESLGASAELDQVIFDGASFGTATPAGSEEEADYLGIPGLLDADQMRDLLRRRQ
EEQLTRRTASGEPPPVTPYGQLRELRQELNTLVSLAHHRLNKPHGWIHNELRRICGGPPVAAATSDQLQARIAAVRTLKA

Specific function: Unknown

COG id: COG1061

COG function: function code KL; DNA or RNA helicases of superfamily II

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2917 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR006935 [H]

Pfam domain/function: PF00271 Helicase_C; PF04851 ResIII [H]

EC number: NA

Molecular weight: Translated: 61012; Mature: 61012

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAYAAPDTQALRGWQRRALVRYLGAKPRDFLAVATPGAGKTTFALRIAGELLADGTVER
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEHHHHHCCCCEEE
VTVVVPTEHLKIQWAQAAARSGIALDPKFSNSSAQTSSEYHGVVVTYAQVASHPTRHRVR
EEEEECCCHHEEEEHHHHHCCCCEECCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHCEE
TENYRTLVIFDEIHHGGDAKTWGDAMREAFSDATRRLSLTGTPFRSDDSPIPFVNYVPDA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCCH
EGLLRSESDHTYGYADALADGVVRPVIFLAYSGEARWRSSAGEEHAARLGEPLNAEQTAR
HHHHCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCHHCCCCCHHHHHHCCCCCCHHHHHH
AWRTVLDANGEWIPAVLKAADTRLRQLRAGGMPDAGAMIIATDQTAARQYAALLTKMTGE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCC
APTLVLSDDPGSSARIAEYSAGDTPWLVAVRMVSEGVDVPRLAVGVYATSASTPLFFAQA
CCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH
IGRFVRSRRPGETASIFVPSVPTLLDLASQMEAQRDHVLGKPHRESMGDEELVERRRSEP
HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCC
TEEDRGFESLGASAELDQVIFDGASFGTATPAGSEEEADYLGIPGLLDADQMRDLLRRRQ
CHHHCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EEQLTRRTASGEPPPVTPYGQLRELRQELNTLVSLAHHRLNKPHGWIHNELRRICGGPPV
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
AAATSDQLQARIAAVRTLKA
CCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRAYAAPDTQALRGWQRRALVRYLGAKPRDFLAVATPGAGKTTFALRIAGELLADGTVER
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEEEEHHHHHCCCCEEE
VTVVVPTEHLKIQWAQAAARSGIALDPKFSNSSAQTSSEYHGVVVTYAQVASHPTRHRVR
EEEEECCCHHEEEEHHHHHCCCCEECCCCCCCCCCCCCCCCCEEEEHHHHHCCCHHHCEE
TENYRTLVIFDEIHHGGDAKTWGDAMREAFSDATRRLSLTGTPFRSDDSPIPFVNYVPDA
CCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCEEECCCCH
EGLLRSESDHTYGYADALADGVVRPVIFLAYSGEARWRSSAGEEHAARLGEPLNAEQTAR
HHHHCCCCCCCCCHHHHHHHHHHCEEEEEEECCCCHHCCCCCHHHHHHCCCCCCHHHHHH
AWRTVLDANGEWIPAVLKAADTRLRQLRAGGMPDAGAMIIATDQTAARQYAALLTKMTGE
HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHCCC
APTLVLSDDPGSSARIAEYSAGDTPWLVAVRMVSEGVDVPRLAVGVYATSASTPLFFAQA
CCEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHH
IGRFVRSRRPGETASIFVPSVPTLLDLASQMEAQRDHVLGKPHRESMGDEELVERRRSEP
HHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHCCCC
TEEDRGFESLGASAELDQVIFDGASFGTATPAGSEEEADYLGIPGLLDADQMRDLLRRRQ
CHHHCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
EEQLTRRTASGEPPPVTPYGQLRELRQELNTLVSLAHHRLNKPHGWIHNELRRICGGPPV
HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCC
AAATSDQLQARIAAVRTLKA
CCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]