| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is pimE [H]
Identifier: 108797446
GI number: 108797446
Start: 520127
End: 521443
Strand: Direct
Name: pimE [H]
Synonym: Mmcs_0466
Alternate gene names: 108797446
Gene position: 520127-521443 (Clockwise)
Preceding gene: 108797445
Following gene: 108797447
Centisome position: 9.12
GC content: 61.5
Gene sequence:
>1317_bases GTGGCTTCGATCTCTATGGAACGTTCAACCGTCGCGCGAGGTGTCATGACGCGCCGATGTCGCCATCTGACTCGGGTGGC GCCGTGGTTGCTCGCCGTCAGCCTCGCATTACGATTCGTTGGCTCGATACCGTTCCTGGATATGCTGTTCGTCGATTTGC GGGTGTACATACTCGGTGGCGAAGCATTGACCCAGCCCGGCACGCTGTACGGACTAACTTACATTGATAGCTATGGCGAT CATCTGCCATTCATCTATCCACCATTCGCTGCTCTGCTTTTCTACCCGTTGCACTTTCTTCCGTTCCCCGTAGTAGCGTG GATCTGGCAACTCGCCGTCGTAGCCGGTCTGTACGGTCTGGTACGGATTAGTCAGCGAATGTTGGGTGGCGGTAGTCACC GGGTCGCCATGCTCTGGACCGCAGCGGGAATTTGGTTCGAGCCCATCCGAACCATACTGACCTGTTCCCAAGTAGGCGTC TTCCTTACGCTGGCCGTGTTGTATGCGGCATACACGTCGCGGTCGTGGTTGTCGGGACTGCTGGTGGGCCTATCCGCTGG CGTGAAGGTGACACCGGCGATCACCGGTCTGTACTTCGTCGGAATGCGACGCTGGGCGGCGGTCTGTTTCTCGCTGGCTG CATTTCTGGCCACGGTATTGGTGTCGGCGGTGATAGCTCCGCAGGAGACTCGTCAGTTCTTCGGCGGATTATTCAGTCGG GTTCCGATGCCGACAGCCACCTGCTTGAACCAGTCGTGGCGGGGCACGGTGTCGCGCATTGTCGGCTACGATGCCGGCCG TTCGTTGGTGCTGCTTGTGGCGATCGGGGTAACGGCAGTGTTGGCGCTCCTGGCATGGCGGGAGCTGGGTAGGGGTCCGG GTGGGCGGGATGCGCTTGCTTCGTTATTGGTCGTACAACTGTTCGGGCTCACGGCTTCACCAATCTCGTGGGCCCACCAC TGGGTATGGGTCGTTCCACTGACGATCTGGCTTCTCCATGGTCCATGGCGGGGCAGAGCCGGTGCCCGTGTCCTCGGTAG CGGGTGGATCGCCTTGATGGTGATCGGTGTGCCGACATTGCTGTCCGGTCAGCAGGCCGACCTGTCGACCTTCTCACGCC CGTGGTACCTCGCCGTGGCCGCTGCCGTCTACGTGCCGATGACCCTAGTCACCTTTGCCTGGATCATCGTCGCCAGCCGA ACGGGGACCCGGCGTACCTGTCCGCCGTCGGAGCCGAAGGCCGAAAGCGCACCGTCGACTTCGGCGGTGGTGTTCACGCC CGCGGCGTCGCATGCGGAGCGTCCAACGAACCGATGA
Upstream 100 bases:
>100_bases GCTATCGGCCGCGCTACTGGGAGAGCAGTGGAACGGCCGAGGATTAAGTGGGGCGGGGGCAACGCTGACCACCAGGCACT CAGCGGTAGGGGGAGGACGC
Downstream 100 bases:
>100_bases CTCGACTGCCCTTGCCGATACCGCGCTCGGACGGAGCGAAAGCAGCACCGACCGTCGGTCGTTATAGTCGCCCGATGCGC GCGGCGTCGGCTTTGAAGGT
Product: mannosyltransferase
Products: NA
Alternate protein names: Alpha-mannosyltransferase; Alpha-manT; PPM-dependent mannosyltransferase; Polyprenol-phosphate-mannose alpha-mannosyltransferase; PPM alpha-mannosyltransferase [H]
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MASISMERSTVARGVMTRRCRHLTRVAPWLLAVSLALRFVGSIPFLDMLFVDLRVYILGGEALTQPGTLYGLTYIDSYGD HLPFIYPPFAALLFYPLHFLPFPVVAWIWQLAVVAGLYGLVRISQRMLGGGSHRVAMLWTAAGIWFEPIRTILTCSQVGV FLTLAVLYAAYTSRSWLSGLLVGLSAGVKVTPAITGLYFVGMRRWAAVCFSLAAFLATVLVSAVIAPQETRQFFGGLFSR VPMPTATCLNQSWRGTVSRIVGYDAGRSLVLLVAIGVTAVLALLAWRELGRGPGGRDALASLLVVQLFGLTASPISWAHH WVWVVPLTIWLLHGPWRGRAGARVLGSGWIALMVIGVPTLLSGQQADLSTFSRPWYLAVAAAVYVPMTLVTFAWIIVASR TGTRRTCPPSEPKAESAPSTSAVVFTPAASHAERPTNR
Sequences:
>Translated_438_residues MASISMERSTVARGVMTRRCRHLTRVAPWLLAVSLALRFVGSIPFLDMLFVDLRVYILGGEALTQPGTLYGLTYIDSYGD HLPFIYPPFAALLFYPLHFLPFPVVAWIWQLAVVAGLYGLVRISQRMLGGGSHRVAMLWTAAGIWFEPIRTILTCSQVGV FLTLAVLYAAYTSRSWLSGLLVGLSAGVKVTPAITGLYFVGMRRWAAVCFSLAAFLATVLVSAVIAPQETRQFFGGLFSR VPMPTATCLNQSWRGTVSRIVGYDAGRSLVLLVAIGVTAVLALLAWRELGRGPGGRDALASLLVVQLFGLTASPISWAHH WVWVVPLTIWLLHGPWRGRAGARVLGSGWIALMVIGVPTLLSGQQADLSTFSRPWYLAVAAAVYVPMTLVTFAWIIVASR TGTRRTCPPSEPKAESAPSTSAVVFTPAASHAERPTNR >Mature_437_residues ASISMERSTVARGVMTRRCRHLTRVAPWLLAVSLALRFVGSIPFLDMLFVDLRVYILGGEALTQPGTLYGLTYIDSYGDH LPFIYPPFAALLFYPLHFLPFPVVAWIWQLAVVAGLYGLVRISQRMLGGGSHRVAMLWTAAGIWFEPIRTILTCSQVGVF LTLAVLYAAYTSRSWLSGLLVGLSAGVKVTPAITGLYFVGMRRWAAVCFSLAAFLATVLVSAVIAPQETRQFFGGLFSRV PMPTATCLNQSWRGTVSRIVGYDAGRSLVLLVAIGVTAVLALLAWRELGRGPGGRDALASLLVVQLFGLTASPISWAHHW VWVVPLTIWLLHGPWRGRAGARVLGSGWIALMVIGVPTLLSGQQADLSTFSRPWYLAVAAAVYVPMTLVTFAWIIVASRT GTRRTCPPSEPKAESAPSTSAVVFTPAASHAERPTNR
Specific function: Catalyzes the alpha-1,2 addition of a mannose residue from polyprenol-phosphate-mannose (PPM) to a monoacyl phosphatidylinositol pentamannoside (AcPIM5) to generate a monoacyl phosphatidylinositol hexamannoside (AcPIM6) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PIGM family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018584 [H]
Pfam domain/function: PF09594 DUF2029 [H]
EC number: NA
Molecular weight: Translated: 47570; Mature: 47438
Theoretical pI: Translated: 10.89; Mature: 10.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASISMERSTVARGVMTRRCRHLTRVAPWLLAVSLALRFVGSIPFLDMLFVDLRVYILGG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECC EALTQPGTLYGLTYIDSYGDHLPFIYPPFAALLFYPLHFLPFPVVAWIWQLAVVAGLYGL HHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRISQRMLGGGSHRVAMLWTAAGIWFEPIRTILTCSQVGVFLTLAVLYAAYTSRSWLSGL HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGLSAGVKVTPAITGLYFVGMRRWAAVCFSLAAFLATVLVSAVIAPQETRQFFGGLFSR HHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VPMPTATCLNQSWRGTVSRIVGYDAGRSLVLLVAIGVTAVLALLAWRELGRGPGGRDALA CCCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SLLVVQLFGLTASPISWAHHWVWVVPLTIWLLHGPWRGRAGARVLGSGWIALMVIGVPTL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHCCHHHHHHHHHHHH LSGQQADLSTFSRPWYLAVAAAVYVPMTLVTFAWIIVASRTGTRRTCPPSEPKAESAPST CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SAVVFTPAASHAERPTNR CEEEEECCHHHCCCCCCC >Mature Secondary Structure ASISMERSTVARGVMTRRCRHLTRVAPWLLAVSLALRFVGSIPFLDMLFVDLRVYILGG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEECC EALTQPGTLYGLTYIDSYGDHLPFIYPPFAALLFYPLHFLPFPVVAWIWQLAVVAGLYGL HHHCCCCCEEEEHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRISQRMLGGGSHRVAMLWTAAGIWFEPIRTILTCSQVGVFLTLAVLYAAYTSRSWLSGL HHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGLSAGVKVTPAITGLYFVGMRRWAAVCFSLAAFLATVLVSAVIAPQETRQFFGGLFSR HHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH VPMPTATCLNQSWRGTVSRIVGYDAGRSLVLLVAIGVTAVLALLAWRELGRGPGGRDALA CCCCHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH SLLVVQLFGLTASPISWAHHWVWVVPLTIWLLHGPWRGRAGARVLGSGWIALMVIGVPTL HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHCCHHHHHHHHHHHH LSGQQADLSTFSRPWYLAVAAAVYVPMTLVTFAWIIVASRTGTRRTCPPSEPKAESAPST CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC SAVVFTPAASHAERPTNR CEEEEECCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]