| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ucpA [C]
Identifier: 108797310
GI number: 108797310
Start: 367854
End: 368693
Strand: Reverse
Name: ucpA [C]
Synonym: Mmcs_0330
Alternate gene names: 108797310
Gene position: 368693-367854 (Counterclockwise)
Preceding gene: 108797311
Following gene: 108797309
Centisome position: 6.46
GC content: 66.9
Gene sequence:
>840_bases ATGGGCGGGCGAGTCGACGGCAAGGTCGCGTTCATCACGGGTGCCGCGCGCGGTCAGGGCCGCAGTCATGCGGTGCGGCT CGCCGAGGAGGGCGCCGACATCATCGCCGTGGATGTGTGCGGTCCGATCAGCAGCCACACCGACATCCCGCCCGCCACAC CCGACGACCTCGCCCAGACCGCGGATCTGGTCAAGGGACTGAACCGCCGGATCGTCACCGCCGAGGTCGACGTCCGCGAT TTCGATGCGCTCGACGCGGTCGTCCGCAGCGGCGTCGAGCAACTCGGTCGGCTCGACATCGTGGTGGCGAACGCCGGGAT CGGCAACGGGGGCCAGACCCTGGACAAGACCAGCGAGGACGACTGGCGTGACATGATCGACGTCAACCTGTCCGGCGTCT GGAAGACGGTCAAAGCCGCTGTGCCGCATCTGCTCTCGGGAGGCCGCGGCGGATCGATCATCCTCACCAGCTCGGTGGGC GGGCTCAAGGCATATCCGCACACCGGCCACTACATCGCGGCCAAGCACGGCGTGATCGGGTTGATGCGGACCTTCGCGGT CGAGTTGGGGCAGCATTCGATCCGGGTCAACGCGGTGTGCCCCACCAACGTCAACACCCCGCTGTTCATGAACGAGGGGA CGAAGAAGCTGTTCCGGCCCGATCTGGAGAACCCCGGCGTCGACGACCTCGCCGTGGCAGCGCAGTTCATGCACGTGCTG CCCGTGGGCTGGGTCGAGCCGATCGACATCAGCAACGCCGTGTTGTTCCTCGCCTCCGACGAATCCCGTTACGTCACCGG GCTACCCGTCACCGTCGACGCCGGTAGCATGCTCAAGTAG
Upstream 100 bases:
>100_bases ACGGCAGGCCAGGACGGTTGACAAGCCGCGCCCACAGTGTCACGCTCCTGATCGATCGATCAGAATTGATCGGGCGACAA AGCGAGGGAAGGTAGGCGAT
Downstream 100 bases:
>100_bases CGCGTGCCGCCGGACACAGGAGTCCCGTGTGAAACTCGTCTTCAACCTGCCCCACATGCTGCGGCTCAAGGCGATGATGC AGCCGTGGGAGGCCGCGGTC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MGGRVDGKVAFITGAARGQGRSHAVRLAEEGADIIAVDVCGPISSHTDIPPATPDDLAQTADLVKGLNRRIVTAEVDVRD FDALDAVVRSGVEQLGRLDIVVANAGIGNGGQTLDKTSEDDWRDMIDVNLSGVWKTVKAAVPHLLSGGRGGSIILTSSVG GLKAYPHTGHYIAAKHGVIGLMRTFAVELGQHSIRVNAVCPTNVNTPLFMNEGTKKLFRPDLENPGVDDLAVAAQFMHVL PVGWVEPIDISNAVLFLASDESRYVTGLPVTVDAGSMLK
Sequences:
>Translated_279_residues MGGRVDGKVAFITGAARGQGRSHAVRLAEEGADIIAVDVCGPISSHTDIPPATPDDLAQTADLVKGLNRRIVTAEVDVRD FDALDAVVRSGVEQLGRLDIVVANAGIGNGGQTLDKTSEDDWRDMIDVNLSGVWKTVKAAVPHLLSGGRGGSIILTSSVG GLKAYPHTGHYIAAKHGVIGLMRTFAVELGQHSIRVNAVCPTNVNTPLFMNEGTKKLFRPDLENPGVDDLAVAAQFMHVL PVGWVEPIDISNAVLFLASDESRYVTGLPVTVDAGSMLK >Mature_278_residues GGRVDGKVAFITGAARGQGRSHAVRLAEEGADIIAVDVCGPISSHTDIPPATPDDLAQTADLVKGLNRRIVTAEVDVRDF DALDAVVRSGVEQLGRLDIVVANAGIGNGGQTLDKTSEDDWRDMIDVNLSGVWKTVKAAVPHLLSGGRGGSIILTSSVGG LKAYPHTGHYIAAKHGVIGLMRTFAVELGQHSIRVNAVCPTNVNTPLFMNEGTKKLFRPDLENPGVDDLAVAAQFMHVLP VGWVEPIDISNAVLFLASDESRYVTGLPVTVDAGSMLK
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI15277342, Length=286, Percent_Identity=33.2167832167832, Blast_Score=108, Evalue=8e-24, Organism=Homo sapiens, GI66933014, Length=278, Percent_Identity=29.8561151079137, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=31.9047619047619, Blast_Score=96, Evalue=3e-20, Organism=Homo sapiens, GI4504505, Length=224, Percent_Identity=30.3571428571429, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI40254992, Length=275, Percent_Identity=31.6363636363636, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI32483357, Length=273, Percent_Identity=25.6410256410256, Blast_Score=88, Evalue=8e-18, Organism=Homo sapiens, GI59889578, Length=204, Percent_Identity=29.4117647058824, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI19923817, Length=282, Percent_Identity=25.177304964539, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI224922801, Length=185, Percent_Identity=31.3513513513514, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI126723750, Length=276, Percent_Identity=25.3623188405797, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI10190704, Length=272, Percent_Identity=28.6764705882353, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI40254986, Length=206, Percent_Identity=30.5825242718447, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI7705925, Length=270, Percent_Identity=28.5185185185185, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI5031737, Length=272, Percent_Identity=25.7352941176471, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI7706318, Length=204, Percent_Identity=24.5098039215686, Blast_Score=68, Evalue=7e-12, Organism=Homo sapiens, GI223718074, Length=181, Percent_Identity=32.5966850828729, Blast_Score=68, Evalue=9e-12, Organism=Homo sapiens, GI20149619, Length=206, Percent_Identity=29.126213592233, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723191, Length=192, Percent_Identity=27.0833333333333, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI33667109, Length=205, Percent_Identity=28.2926829268293, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI4758504, Length=215, Percent_Identity=27.4418604651163, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI142976729, Length=222, Percent_Identity=26.5765765765766, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI87082100, Length=278, Percent_Identity=34.1726618705036, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1789208, Length=276, Percent_Identity=30.4347826086957, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1787335, Length=271, Percent_Identity=31.7343173431734, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1788459, Length=271, Percent_Identity=30.2583025830258, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI87082160, Length=279, Percent_Identity=27.2401433691756, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787905, Length=273, Percent_Identity=26.3736263736264, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI1789378, Length=265, Percent_Identity=26.0377358490566, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790717, Length=277, Percent_Identity=29.2418772563177, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786812, Length=275, Percent_Identity=26.9090909090909, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1789057, Length=192, Percent_Identity=27.0833333333333, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788891, Length=277, Percent_Identity=25.9927797833935, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI2367175, Length=267, Percent_Identity=25.4681647940075, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17559104, Length=285, Percent_Identity=31.2280701754386, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17562904, Length=283, Percent_Identity=28.2685512367491, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17568967, Length=227, Percent_Identity=31.2775330396476, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17531453, Length=298, Percent_Identity=28.8590604026846, Blast_Score=93, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17560676, Length=272, Percent_Identity=25.7352941176471, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71994604, Length=275, Percent_Identity=29.0909090909091, Blast_Score=91, Evalue=7e-19, Organism=Caenorhabditis elegans, GI25147288, Length=277, Percent_Identity=30.3249097472924, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17562910, Length=286, Percent_Identity=28.3216783216783, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562906, Length=292, Percent_Identity=29.1095890410959, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17562990, Length=286, Percent_Identity=28.6713286713287, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17538486, Length=282, Percent_Identity=29.0780141843972, Blast_Score=89, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17555706, Length=273, Percent_Identity=30.7692307692308, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI71994600, Length=277, Percent_Identity=25.9927797833935, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17560150, Length=283, Percent_Identity=28.6219081272085, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17562908, Length=291, Percent_Identity=28.1786941580756, Blast_Score=86, Evalue=2e-17, Organism=Caenorhabditis elegans, GI17561402, Length=276, Percent_Identity=27.1739130434783, Blast_Score=85, Evalue=4e-17, Organism=Caenorhabditis elegans, GI193204405, Length=286, Percent_Identity=29.020979020979, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI72000259, Length=280, Percent_Identity=27.5, Blast_Score=80, Evalue=2e-15, Organism=Caenorhabditis elegans, GI17544670, Length=299, Percent_Identity=26.4214046822742, Blast_Score=77, Evalue=7e-15, Organism=Caenorhabditis elegans, GI17538480, Length=291, Percent_Identity=29.2096219931272, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17560332, Length=289, Percent_Identity=28.3737024221453, Blast_Score=77, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17564282, Length=214, Percent_Identity=29.4392523364486, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17563726, Length=280, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17551412, Length=290, Percent_Identity=28.6206896551724, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17560220, Length=286, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI193203117, Length=218, Percent_Identity=27.9816513761468, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508895, Length=205, Percent_Identity=26.3414634146341, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71982365, Length=201, Percent_Identity=27.363184079602, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193203115, Length=217, Percent_Identity=28.110599078341, Blast_Score=67, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=269, Percent_Identity=28.6245353159851, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6322861, Length=200, Percent_Identity=30, Blast_Score=84, Evalue=2e-17, Organism=Drosophila melanogaster, GI18859837, Length=228, Percent_Identity=34.2105263157895, Blast_Score=101, Evalue=6e-22, Organism=Drosophila melanogaster, GI24639444, Length=277, Percent_Identity=29.2418772563177, Blast_Score=91, Evalue=8e-19, Organism=Drosophila melanogaster, GI24644339, Length=288, Percent_Identity=29.5138888888889, Blast_Score=89, Evalue=3e-18, Organism=Drosophila melanogaster, GI23397609, Length=272, Percent_Identity=29.7794117647059, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI21355319, Length=273, Percent_Identity=27.1062271062271, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI28571526, Length=274, Percent_Identity=27.7372262773723, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI21357041, Length=272, Percent_Identity=27.5735294117647, Blast_Score=78, Evalue=7e-15, Organism=Drosophila melanogaster, GI17737361, Length=256, Percent_Identity=23.4375, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281364892, Length=216, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=6e-14, Organism=Drosophila melanogaster, GI24643142, Length=269, Percent_Identity=27.5092936802974, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24649181, Length=205, Percent_Identity=29.2682926829268, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI21357673, Length=202, Percent_Identity=27.2277227722772, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI24644337, Length=204, Percent_Identity=30.8823529411765, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI24584748, Length=238, Percent_Identity=26.890756302521, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI161076933, Length=238, Percent_Identity=26.890756302521, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581726, Length=232, Percent_Identity=27.5862068965517, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI221331218, Length=216, Percent_Identity=27.3148148148148, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI24665243, Length=216, Percent_Identity=27.3148148148148, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI21355631, Length=266, Percent_Identity=24.0601503759398, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 29403; Mature: 29272
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGRVDGKVAFITGAARGQGRSHAVRLAEEGADIIAVDVCGPISSHTDIPPATPDDLAQT CCCCCCCEEEEEEECCCCCCCHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH ADLVKGLNRRIVTAEVDVRDFDALDAVVRSGVEQLGRLDIVVANAGIGNGGQTLDKTSED HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCH DWRDMIDVNLSGVWKTVKAAVPHLLSGGRGGSIILTSSVGGLKAYPHTGHYIAAKHGVIG HHHHHEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCEEEECCCHHH LMRTFAVELGQHSIRVNAVCPTNVNTPLFMNEGTKKLFRPDLENPGVDDLAVAAQFMHVL HHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHC PVGWVEPIDISNAVLFLASDESRYVTGLPVTVDAGSMLK CCCCCCCCCCCCEEEEEECCCCCEEEECEEEECCCCCCC >Mature Secondary Structure GGRVDGKVAFITGAARGQGRSHAVRLAEEGADIIAVDVCGPISSHTDIPPATPDDLAQT CCCCCCEEEEEEECCCCCCCHHEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHH ADLVKGLNRRIVTAEVDVRDFDALDAVVRSGVEQLGRLDIVVANAGIGNGGQTLDKTSED HHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCH DWRDMIDVNLSGVWKTVKAAVPHLLSGGRGGSIILTSSVGGLKAYPHTGHYIAAKHGVIG HHHHHEECCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCEEEECCCHHH LMRTFAVELGQHSIRVNAVCPTNVNTPLFMNEGTKKLFRPDLENPGVDDLAVAAQFMHVL HHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHC PVGWVEPIDISNAVLFLASDESRYVTGLPVTVDAGSMLK CCCCCCCCCCCCEEEEEECCCCCEEEECEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA