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The map label for this gene is 108797311

Identifier: 108797311

GI number: 108797311

Start: 368773

End: 369360

Strand: Reverse

Name: 108797311

Synonym: Mmcs_0331

Alternate gene names: NA

Gene position: 369360-368773 (Counterclockwise)

Preceding gene: 108797313

Following gene: 108797310

Centisome position: 6.47

GC content: 67.18

Gene sequence:

>588_bases
ATGTCGGCTCCCCGGAAACCCAAGGCGGACATCTCGGCCCGGCAGCGGCTCATCGAGGCAACGGCGAAGATCATGCGTGA
AGAGGGTTACGCCGCTGCGACGTCGCGCCGGGTGGCCGCCGAGGCGGGCGTCAAACAGGCGCTGGTCTACTACTACTTCC
CCACCATGGACGACCTCTACGTGGAAGTCCTGCGGGCCGGCGCGGAAGCCTCACTGGAACGCATGCGCGAAGCGCTCACC
GCCGACGAACCGCTGCACACGCTGTGGACGATGAACAGTGACTTGCGCCTGACGGGGCTCAACACCGAGTTCATGGCACT
GGCCAACCACCGCAAGGCGATCCGCGCCGAACTCAAGTCCTACGCCGAGCGGGTCAGGGACATCGAGACGGCGGCCGTCG
CCGTCGCGCTTCGCGAGCGCGGTGTCGACCTGCAGGAGTATCCGCCCACCGCGGTGTCGATGCTCATCGCCCAGACCGCC
CGGAGCCTGTGCAACGAGAGCGCGGTCGGTGTCACGTTGGGACACGACGAGTTCCGCGCGTTCATGGAGCGCCTGCTGGA
CCGGTTGACGGCAGGCCAGGACGGTTGA

Upstream 100 bases:

>100_bases
CTTCGCTGCATCCTGATCGATCGATCAGGCTGATAGAATGCGCCATGCCTATCACGCCGTCTCGCGGGGGGTCAAGCGAT
CCACGAGTCGAGGTCCACTG

Downstream 100 bases:

>100_bases
CAAGCCGCGCCCACAGTGTCACGCTCCTGATCGATCGATCAGAATTGATCGGGCGACAAAGCGAGGGAAGGTAGGCGATA
TGGGCGGGCGAGTCGACGGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Transcriptional Regulator

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MSAPRKPKADISARQRLIEATAKIMREEGYAAATSRRVAAEAGVKQALVYYYFPTMDDLYVEVLRAGAEASLERMREALT
ADEPLHTLWTMNSDLRLTGLNTEFMALANHRKAIRAELKSYAERVRDIETAAVAVALRERGVDLQEYPPTAVSMLIAQTA
RSLCNESAVGVTLGHDEFRAFMERLLDRLTAGQDG

Sequences:

>Translated_195_residues
MSAPRKPKADISARQRLIEATAKIMREEGYAAATSRRVAAEAGVKQALVYYYFPTMDDLYVEVLRAGAEASLERMREALT
ADEPLHTLWTMNSDLRLTGLNTEFMALANHRKAIRAELKSYAERVRDIETAAVAVALRERGVDLQEYPPTAVSMLIAQTA
RSLCNESAVGVTLGHDEFRAFMERLLDRLTAGQDG
>Mature_194_residues
SAPRKPKADISARQRLIEATAKIMREEGYAAATSRRVAAEAGVKQALVYYYFPTMDDLYVEVLRAGAEASLERMREALTA
DEPLHTLWTMNSDLRLTGLNTEFMALANHRKAIRAELKSYAERVRDIETAAVAVALRERGVDLQEYPPTAVSMLIAQTAR
SLCNESAVGVTLGHDEFRAFMERLLDRLTAGQDG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21678; Mature: 21547

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAPRKPKADISARQRLIEATAKIMREEGYAAATSRRVAAEAGVKQALVYYYFPTMDDLY
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VEVLRAGAEASLERMREALTADEPLHTLWTMNSDLRLTGLNTEFMALANHRKAIRAELKS
HHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
YAERVRDIETAAVAVALRERGVDLQEYPPTAVSMLIAQTARSLCNESAVGVTLGHDEFRA
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
FMERLLDRLTAGQDG
HHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAPRKPKADISARQRLIEATAKIMREEGYAAATSRRVAAEAGVKQALVYYYFPTMDDLY
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
VEVLRAGAEASLERMREALTADEPLHTLWTMNSDLRLTGLNTEFMALANHRKAIRAELKS
HHHHHCCHHHHHHHHHHHHCCCCCHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
YAERVRDIETAAVAVALRERGVDLQEYPPTAVSMLIAQTARSLCNESAVGVTLGHDEFRA
HHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHH
FMERLLDRLTAGQDG
HHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA