| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ifcA [H]
Identifier: 108797296
GI number: 108797296
Start: 353675
End: 355138
Strand: Reverse
Name: ifcA [H]
Synonym: Mmcs_0316
Alternate gene names: 108797296
Gene position: 355138-353675 (Counterclockwise)
Preceding gene: 108797297
Following gene: 108797295
Centisome position: 6.22
GC content: 70.7
Gene sequence:
>1464_bases GTGACGGCCGACGACGTCCGGCCCGTCCCCGCCTCGTCGGTCACCTCCTGGGACCACGAGGCCGACGTGGTGATCGCCGG GTACGGCGTCGCCGGTGCCGCCGCGGCGGTCGAGGCCGCACACGCGGGCGCCGACGTGCTGGTGCTCGAACGAACCGGTT CGTGGGGCGGAGCGGCCTCGATGGCCGGCGGGTTCATCTACCTCGGCGGCGGGACACCGATTCAAAAAGCCTGCGGCTTC GAGGATTCGGTCGACAACATGGCGGCGTTCCTGAACGCGGCCATGGGCCCCGGTGCAGATGACCGCCGGATCGCCGACTA CTGCGAGGGCAGCGTCGCGCACTTCGACTGGCTGGTCGAATGCGGGGTCCCGTTCAAGGCCGAGTTCTTCGGCGAACCGG GCTGGGAGCCGATGGGCGACCAGGGCCTGATGTACAGCGGCGGGGAGAACTCGTATCCGTTCAACACCATCGCCACGCCG GCCCCTCGCGGACACGTCCCGCAGATGTCGGACAAGAAGCAGGGTGAGGCGAGCGCCGGCTACATGCTGATGAAACCGCT CGTCGAGACCGCGACCGCGGCCGGCGCCCGCGCGCTGTACGACGTGCGGGTCCAGCGCCTGGTGGTCGAGGCCGACGGCC GGGTGACCGGCATCTGCGCCCGCCAGTACGGCACCGACGTCACGATCCGCGCGCGCCGCGGGGTGGTGCTGGCCACCGGC AGCTTCGCCTACAACGACGCGATGGTGGCTCAGTACGCCCCGCGGATCGCGGGACGTCCCGCGGCGTCGATCGAACAGCA CGACGGTCAGGCGATCCGGATGGCCCAGGCGCTCGGCGCCGATCTGGCGCACATGGACGCCACCGAGGTCGCGATCTTCA TCGACCCGCAGCAGTTGGTGCGCGGTGTCCTGGTCAACGAGCGGGGCCAGCGGTTCGTCGCCGAGGACACCTATCCCGGC CGGGTCGGGCAACTCACGCTGTACCACCAGAACAACACCGCGTACCTGATCATCGACGGCGACGCGCAGGAGGAGGCGAT GGCCTCGCTGTCGCCTCAGCTCATGATGCGGCCGCCGACGTGGGTGTGCGAGACCGTCGCCGAACTCGAGGCCGAGATCG GACTGGCACCCGGATCGCTGCAGACCACGATTGCCGCCTACAACGACGGCGCGGCGCGCGGGGAAGATCCACTGCTGCAC AAGAAACCGCAGTGGCTGCGTCCGGTCGGGTCCCCGGTCGGGGCGATCGATCTGCGCGAGAGCACCGGGGGATTCACCCT GGGCGGCCTACAGACCTCGCTGGACGGGGAGGTGCTGCACGTCGACGGGGAGCCGATCCCCGGGCTGTTCGCCGCGGGCC GCTCGACCGCCGGCCTGGCCGCCTGGGGATACGCCAGCGGAATCTCCTTGGGCGACGGCAGTTTCTACGGCCGCCGGGCA GGACGCGCCGCCGCGAAGGGCTGA
Upstream 100 bases:
>100_bases GGATGCGGGTCGACGAAACCTATTACACCGCTGAGGAGATCACCGCCGACAGCTACTGGGGCCACCAGTGGGTGGGTGAC CTCCCCGCGGCGATGCGCCC
Downstream 100 bases:
>100_bases TCGCCTCCGGACCATGGCCGTGACCCAGCCGGGTCACGGCCATATCGGCGTGGCCGAATGTGGGCTGAATCCAGTTTCAA GATCCAAGTGACACAGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTADDVRPVPASSVTSWDHEADVVIAGYGVAGAAAAVEAAHAGADVLVLERTGSWGGAASMAGGFIYLGGGTPIQKACGF EDSVDNMAAFLNAAMGPGADDRRIADYCEGSVAHFDWLVECGVPFKAEFFGEPGWEPMGDQGLMYSGGENSYPFNTIATP APRGHVPQMSDKKQGEASAGYMLMKPLVETATAAGARALYDVRVQRLVVEADGRVTGICARQYGTDVTIRARRGVVLATG SFAYNDAMVAQYAPRIAGRPAASIEQHDGQAIRMAQALGADLAHMDATEVAIFIDPQQLVRGVLVNERGQRFVAEDTYPG RVGQLTLYHQNNTAYLIIDGDAQEEAMASLSPQLMMRPPTWVCETVAELEAEIGLAPGSLQTTIAAYNDGAARGEDPLLH KKPQWLRPVGSPVGAIDLRESTGGFTLGGLQTSLDGEVLHVDGEPIPGLFAAGRSTAGLAAWGYASGISLGDGSFYGRRA GRAAAKG
Sequences:
>Translated_487_residues MTADDVRPVPASSVTSWDHEADVVIAGYGVAGAAAAVEAAHAGADVLVLERTGSWGGAASMAGGFIYLGGGTPIQKACGF EDSVDNMAAFLNAAMGPGADDRRIADYCEGSVAHFDWLVECGVPFKAEFFGEPGWEPMGDQGLMYSGGENSYPFNTIATP APRGHVPQMSDKKQGEASAGYMLMKPLVETATAAGARALYDVRVQRLVVEADGRVTGICARQYGTDVTIRARRGVVLATG SFAYNDAMVAQYAPRIAGRPAASIEQHDGQAIRMAQALGADLAHMDATEVAIFIDPQQLVRGVLVNERGQRFVAEDTYPG RVGQLTLYHQNNTAYLIIDGDAQEEAMASLSPQLMMRPPTWVCETVAELEAEIGLAPGSLQTTIAAYNDGAARGEDPLLH KKPQWLRPVGSPVGAIDLRESTGGFTLGGLQTSLDGEVLHVDGEPIPGLFAAGRSTAGLAAWGYASGISLGDGSFYGRRA GRAAAKG >Mature_486_residues TADDVRPVPASSVTSWDHEADVVIAGYGVAGAAAAVEAAHAGADVLVLERTGSWGGAASMAGGFIYLGGGTPIQKACGFE DSVDNMAAFLNAAMGPGADDRRIADYCEGSVAHFDWLVECGVPFKAEFFGEPGWEPMGDQGLMYSGGENSYPFNTIATPA PRGHVPQMSDKKQGEASAGYMLMKPLVETATAAGARALYDVRVQRLVVEADGRVTGICARQYGTDVTIRARRGVVLATGS FAYNDAMVAQYAPRIAGRPAASIEQHDGQAIRMAQALGADLAHMDATEVAIFIDPQQLVRGVLVNERGQRFVAEDTYPGR VGQLTLYHQNNTAYLIIDGDAQEEAMASLSPQLMMRPPTWVCETVAELEAEIGLAPGSLQTTIAAYNDGAARGEDPLLHK KPQWLRPVGSPVGAIDLRESTGGFTLGGLQTSLDGEVLHVDGEPIPGLFAAGRSTAGLAAWGYASGISLGDGSFYGRRAG RAAAKG
Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]
COG id: COG1053
COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Caenorhabditis elegans, GI71986328, Length=503, Percent_Identity=25.2485089463221, Blast_Score=88, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6320788, Length=499, Percent_Identity=24.0480961923848, Blast_Score=78, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003953 - InterPro: IPR013027 - InterPro: IPR010960 - InterPro: IPR011031 [H]
Pfam domain/function: PF00890 FAD_binding_2 [H]
EC number: =1.3.99.1 [H]
Molecular weight: Translated: 51027; Mature: 50896
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADDVRPVPASSVTSWDHEADVVIAGYGVAGAAAAVEAAHAGADVLVLERTGSWGGAAS CCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHH MAGGFIYLGGGTPIQKACGFEDSVDNMAAFLNAAMGPGADDRRIADYCEGSVAHFDWLVE HCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHEEEHEE CGVPFKAEFFGEPGWEPMGDQGLMYSGGENSYPFNTIATPAPRGHVPQMSDKKQGEASAG CCCCEEHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YMLMKPLVETATAAGARALYDVRVQRLVVEADGRVTGICARQYGTDVTIRARRGVVLATG HHHHHHHHHHHHHHCHHHHHHHEEEEEEEECCCCEEEEEEHHCCCCEEEEECCCEEEEEC SFAYNDAMVAQYAPRIAGRPAASIEQHDGQAIRMAQALGADLAHMDATEVAIFIDPQQLV CCCCCCHHHHHHCCHHCCCCCCCHHHCCCHHHHHHHHHCCCHHCCCCCEEEEEECHHHHH RGVLVNERGQRFVAEDTYPGRVGQLTLYHQNNTAYLIIDGDAQEEAMASLSPQLMMRPPT HHHHHCCCCCEEEECCCCCCCEEEEEEEEECCEEEEEEECCCHHHHHHHCCCCEEECCCH WVCETVAELEAEIGLAPGSLQTTIAAYNDGAARGEDPLLHKKPQWLRPVGSPVGAIDLRE HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEC STGGFTLGGLQTSLDGEVLHVDGEPIPGLFAAGRSTAGLAAWGYASGISLGDGSFYGRRA CCCCEEECCEEECCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC GRAAAKG CCCCCCC >Mature Secondary Structure TADDVRPVPASSVTSWDHEADVVIAGYGVAGAAAAVEAAHAGADVLVLERTGSWGGAAS CCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCHHH MAGGFIYLGGGTPIQKACGFEDSVDNMAAFLNAAMGPGADDRRIADYCEGSVAHFDWLVE HCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHEEEHEE CGVPFKAEFFGEPGWEPMGDQGLMYSGGENSYPFNTIATPAPRGHVPQMSDKKQGEASAG CCCCEEHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YMLMKPLVETATAAGARALYDVRVQRLVVEADGRVTGICARQYGTDVTIRARRGVVLATG HHHHHHHHHHHHHHCHHHHHHHEEEEEEEECCCCEEEEEEHHCCCCEEEEECCCEEEEEC SFAYNDAMVAQYAPRIAGRPAASIEQHDGQAIRMAQALGADLAHMDATEVAIFIDPQQLV CCCCCCHHHHHHCCHHCCCCCCCHHHCCCHHHHHHHHHCCCHHCCCCCEEEEEECHHHHH RGVLVNERGQRFVAEDTYPGRVGQLTLYHQNNTAYLIIDGDAQEEAMASLSPQLMMRPPT HHHHHCCCCCEEEECCCCCCCEEEEEEEEECCEEEEEEECCCHHHHHHHCCCCEEECCCH WVCETVAELEAEIGLAPGSLQTTIAAYNDGAARGEDPLLHKKPQWLRPVGSPVGAIDLRE HHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCEEEEEC STGGFTLGGLQTSLDGEVLHVDGEPIPGLFAAGRSTAGLAAWGYASGISLGDGSFYGRRA CCCCEEECCEEECCCCCEEEECCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCC GRAAAKG CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10455032; 10581549 [H]