Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797263
Identifier: 108797263
GI number: 108797263
Start: 322578
End: 322982
Strand: Direct
Name: 108797263
Synonym: Mmcs_0283
Alternate gene names: NA
Gene position: 322578-322982 (Clockwise)
Preceding gene: 108797262
Following gene: 108797264
Centisome position: 5.65
GC content: 67.41
Gene sequence:
>405_bases GTGAACCGGTTCGCGGCACCGGCAGCGATCGCCGGTCTGATTCTCGGCATGGCACCGCAGGCATCGGCGCAGGGTCCCGT GCCGCATCACGTCCGGTACACCGTCACCGCGGACCAGCCGACCAAGGCCGATATCTATTACCGCGCTGTCGATCCGCCCA ATTGGGCCGACTACAGCCACAACCCGTACCGGTTCAGCCCCAAGGCCGAGGTCGTCCTCGACCCAGCCAGTCCGTGGGTC TTCGACACCACACTCGTCGACCCGAACCGCTGGGCGATGGTGACCGCGACCAGCGGAGTCGGCCCCGACCAGCCGCACTT CCGGTGCGAACTCGCCGTCGACGGCGTGGTGGTCGCCTCGCACGAGGGCCCGAAAGGAGCTCTGTGCTCACAGAGGAGTT GGTAG
Upstream 100 bases:
>100_bases GCACGGGCTTCGAGAACTCGGTGGCCCAAGCGCCCGACGGACTGTTCCTCAGCTGCGTGGCCTCCAGCGGCGAAAGCCTC TGGGTACGTGGAGACAACGC
Downstream 100 bases:
>100_bases CCCATGATTGACTCGATCGAAACTCGCGCGCTCGCCGAGGAGGCCGAAGCCGAAGCGGCAGAGGCGTTGGCCGAAGCGGC GCGCGCCCGCGCGGAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MNRFAAPAAIAGLILGMAPQASAQGPVPHHVRYTVTADQPTKADIYYRAVDPPNWADYSHNPYRFSPKAEVVLDPASPWV FDTTLVDPNRWAMVTATSGVGPDQPHFRCELAVDGVVVASHEGPKGALCSQRSW
Sequences:
>Translated_134_residues MNRFAAPAAIAGLILGMAPQASAQGPVPHHVRYTVTADQPTKADIYYRAVDPPNWADYSHNPYRFSPKAEVVLDPASPWV FDTTLVDPNRWAMVTATSGVGPDQPHFRCELAVDGVVVASHEGPKGALCSQRSW >Mature_134_residues MNRFAAPAAIAGLILGMAPQASAQGPVPHHVRYTVTADQPTKADIYYRAVDPPNWADYSHNPYRFSPKAEVVLDPASPWV FDTTLVDPNRWAMVTATSGVGPDQPHFRCELAVDGVVVASHEGPKGALCSQRSW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016793 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14525; Mature: 14525
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFAAPAAIAGLILGMAPQASAQGPVPHHVRYTVTADQPTKADIYYRAVDPPNWADYSH CCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCC NPYRFSPKAEVVLDPASPWVFDTTLVDPNRWAMVTATSGVGPDQPHFRCELAVDGVVVAS CCEEECCCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECEEEEEE HEGPKGALCSQRSW CCCCCCCCCCCCCC >Mature Secondary Structure MNRFAAPAAIAGLILGMAPQASAQGPVPHHVRYTVTADQPTKADIYYRAVDPPNWADYSH CCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCC NPYRFSPKAEVVLDPASPWVFDTTLVDPNRWAMVTATSGVGPDQPHFRCELAVDGVVVAS CCEEECCCCEEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEECEEEEEE HEGPKGALCSQRSW CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]