Definition | Mycobacterium sp. MCS chromosome, complete genome. |
---|---|
Accession | NC_008146 |
Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797262
Identifier: 108797262
GI number: 108797262
Start: 322201
End: 322581
Strand: Direct
Name: 108797262
Synonym: Mmcs_0282
Alternate gene names: NA
Gene position: 322201-322581 (Clockwise)
Preceding gene: 108797260
Following gene: 108797263
Centisome position: 5.65
GC content: 69.55
Gene sequence:
>381_bases GTGCGCACGCCCGTCTTCGTCGTTTCCGCGGTGGTCACCGCGGCCGTCTTCGCCTCCGCCCCGGCCGGTGCGGACCCGTT GGGATGCGAAGAGCCCGCCTGCGTCCCGGGCATCGCCGGCAACGTCACGCTGGGCGCTCCGTGCGCTAACACCTCTCACT TCGTGTTCGGCACCACGGACTGGGGCAGGCTCGTGTTCTGCGGTTCGCCGCGCCGGTACGCGCCGCGGTACTTCCGGTCA CCGCCCATGGAGGGCATCCGGGTGGAGAACACCAACTGCACGGGCTTCGAGAACTCGGTGGCCCAAGCGCCCGACGGACT GTTCCTCAGCTGCGTGGCCTCCAGCGGCGAAAGCCTCTGGGTACGTGGAGACAACGCGTGA
Upstream 100 bases:
>100_bases TGGGCGAGGCTACCAGCGGCGCGACCCACCTCGGCGCCGCATCGGCCGCTGAGCGGGACGATTCGCGCGCGGTCGCTGTC CCGGATGCCACAGTGGCGCC
Downstream 100 bases:
>100_bases ACCGGTTCGCGGCACCGGCAGCGATCGCCGGTCTGATTCTCGGCATGGCACCGCAGGCATCGGCGCAGGGTCCCGTGCCG CATCACGTCCGGTACACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MRTPVFVVSAVVTAAVFASAPAGADPLGCEEPACVPGIAGNVTLGAPCANTSHFVFGTTDWGRLVFCGSPRRYAPRYFRS PPMEGIRVENTNCTGFENSVAQAPDGLFLSCVASSGESLWVRGDNA
Sequences:
>Translated_126_residues MRTPVFVVSAVVTAAVFASAPAGADPLGCEEPACVPGIAGNVTLGAPCANTSHFVFGTTDWGRLVFCGSPRRYAPRYFRS PPMEGIRVENTNCTGFENSVAQAPDGLFLSCVASSGESLWVRGDNA >Mature_126_residues MRTPVFVVSAVVTAAVFASAPAGADPLGCEEPACVPGIAGNVTLGAPCANTSHFVFGTTDWGRLVFCGSPRRYAPRYFRS PPMEGIRVENTNCTGFENSVAQAPDGLFLSCVASSGESLWVRGDNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13130; Mature: 13130
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTPVFVVSAVVTAAVFASAPAGADPLGCEEPACVPGIAGNVTLGAPCANTSHFVFGTTD CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECC WGRLVFCGSPRRYAPRYFRSPPMEGIRVENTNCTGFENSVAQAPDGLFLSCVASSGESLW CCEEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCHHCCCCCEEEEEEECCCCEEE VRGDNA EEECCC >Mature Secondary Structure MRTPVFVVSAVVTAAVFASAPAGADPLGCEEPACVPGIAGNVTLGAPCANTSHFVFGTTD CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEEECC WGRLVFCGSPRRYAPRYFRSPPMEGIRVENTNCTGFENSVAQAPDGLFLSCVASSGESLW CCEEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCHHCCCCCEEEEEEECCCCEEE VRGDNA EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA