Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797264
Identifier: 108797264
GI number: 108797264
Start: 322986
End: 323615
Strand: Direct
Name: 108797264
Synonym: Mmcs_0284
Alternate gene names: NA
Gene position: 322986-323615 (Clockwise)
Preceding gene: 108797263
Following gene: 108797265
Centisome position: 5.66
GC content: 66.03
Gene sequence:
>630_bases ATGATTGACTCGATCGAAACTCGCGCGCTCGCCGAGGAGGCCGAAGCCGAAGCGGCAGAGGCGTTGGCCGAAGCGGCGCG CGCCCGCGCGGAGCGCTTACGCGCCGAAGCCGCCGAGCCGCAGGACAAGCGACGCCGCCTCCGCCGTCCGGGCTGGAGCA CCGTCGTCGCTGTCCTCGCCGTGTTCGTCACCGCCGCATCGCTTGCGGCGAGCGGATACGTGACGTGGCACCACCGCGAA GCGATGCACCGACAACAGCAGTCGGCCGAGTTCGAGGCCGCGGCAAGGCAGATCGCGATCACACTGATGTCCATCGACGC CGCCAAGGCGGAGGAGAGCGTCAAGCAGATCCTCGACAGCTCGACCGGACAGTTCCACGAGGAGTTCAAGTCGGCCTCAG AGGACTTCGTCAAGCTCACCCAGGACGGCAAGGTGGTCACCGACGTCAAGGTCAAGGCGGCCGCCGTCGAATCCATGACG GAGGATTCGGCAACCGTTCTCGTCACCACGACGTCGACGGTCACCAACGCCGCAGGCGCCGACAAACAGCCCCGGGCGTG GCGTCTCAGCGTCGACATTGTCAGGGATGTAGGCCGACTCAAGATGTCGAAGATGGAGTTCGTCCCGTGA
Upstream 100 bases:
>100_bases CCAGCCGCACTTCCGGTGCGAACTCGCCGTCGACGGCGTGGTGGTCGCCTCGCACGAGGGCCCGAAAGGAGCTCTGTGCT CACAGAGGAGTTGGTAGCCC
Downstream 100 bases:
>100_bases ACGTTCGGAGCACGATGCGGCAGGCACGCTGGCGGCTCATCCTGACCGTACTGATCGCCGCGGCGTCCGTCGGGCTGGCG GTCGTCCTCTACGTCACCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MIDSIETRALAEEAEAEAAEALAEAARARAERLRAEAAEPQDKRRRLRRPGWSTVVAVLAVFVTAASLAASGYVTWHHRE AMHRQQQSAEFEAAARQIAITLMSIDAAKAEESVKQILDSSTGQFHEEFKSASEDFVKLTQDGKVVTDVKVKAAAVESMT EDSATVLVTTTSTVTNAAGADKQPRAWRLSVDIVRDVGRLKMSKMEFVP
Sequences:
>Translated_209_residues MIDSIETRALAEEAEAEAAEALAEAARARAERLRAEAAEPQDKRRRLRRPGWSTVVAVLAVFVTAASLAASGYVTWHHRE AMHRQQQSAEFEAAARQIAITLMSIDAAKAEESVKQILDSSTGQFHEEFKSASEDFVKLTQDGKVVTDVKVKAAAVESMT EDSATVLVTTTSTVTNAAGADKQPRAWRLSVDIVRDVGRLKMSKMEFVP >Mature_209_residues MIDSIETRALAEEAEAEAAEALAEAARARAERLRAEAAEPQDKRRRLRRPGWSTVVAVLAVFVTAASLAASGYVTWHHRE AMHRQQQSAEFEAAARQIAITLMSIDAAKAEESVKQILDSSTGQFHEEFKSASEDFVKLTQDGKVVTDVKVKAAAVESMT EDSATVLVTTTSTVTNAAGADKQPRAWRLSVDIVRDVGRLKMSKMEFVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1362c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22814; Mature: 22814
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSIETRALAEEAEAEAAEALAEAARARAERLRAEAAEPQDKRRRLRRPGWSTVVAVLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH VFVTAASLAASGYVTWHHREAMHRQQQSAEFEAAARQIAITLMSIDAAKAEESVKQILDS HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC STGQFHEEFKSASEDFVKLTQDGKVVTDVKVKAAAVESMTEDSATVLVTTTSTVTNAAGA CCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCC DKQPRAWRLSVDIVRDVGRLKMSKMEFVP CCCCCEEEEHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIDSIETRALAEEAEAEAAEALAEAARARAERLRAEAAEPQDKRRRLRRPGWSTVVAVLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHH VFVTAASLAASGYVTWHHREAMHRQQQSAEFEAAARQIAITLMSIDAAKAEESVKQILDS HHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC STGQFHEEFKSASEDFVKLTQDGKVVTDVKVKAAAVESMTEDSATVLVTTTSTVTNAAGA CCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCC DKQPRAWRLSVDIVRDVGRLKMSKMEFVP CCCCCEEEEHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]