| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is puuP [H]
Identifier: 108797212
GI number: 108797212
Start: 258005
End: 259540
Strand: Reverse
Name: puuP [H]
Synonym: Mmcs_0232
Alternate gene names: 108797212
Gene position: 259540-258005 (Counterclockwise)
Preceding gene: 108797213
Following gene: 108797211
Centisome position: 4.55
GC content: 68.23
Gene sequence:
>1536_bases TTGACCACCGCCGAGAGGAAACCCCCGATGACCCAGACGCCGCCCGAGACCAACTTGGCACCCGAAACCGACCAGCTGCC GCACCGCCGCCTGCCGTTCTGGGTGGCACTGGCCATGTCGGTGGCGCTCGTCGGTCCGACGCTGGCCATGTCCGGTAACG GACAGGGCCTCATCGGCACCGTGGGCAAGGCCATCCCGCTGGTCTTCCTGATCGGTCTGATCGGCGTCTCCCTGGTCGGG TACAGCTTCGTGCGGCTGACCCGCCACCTCAACCACGCCGGGTCGGCATACGGTCTGGTCGGCGGCACCATCGGACCGCG CGCGGGCTTCTTCTCCGGCTTCGCGATGCTCGGTGCCTACGTCGGCTTCTCGATCGGCACACTGGCGCTGACCGCCGCGT TCACCAACGCGTTCATCGCGCAACTGCAACCCGACGCCGAAGACCCCTACCAGGTGCCGTGGCTGCTGGTGGTGCTGGTG GGTGCGGGGATCTCGTTCCTGTTGGCGGGCCGCGACATCCGGCTGCTGGCGAAGATCCTGCTCGGCATCGAAGGCATCGG CATCCTCGCCATGGTGATACTGGTCGCCGTCATCTTCGCCAAGGGCGGGGCGCCGACGACGGGCGTCGACTTCAGCGTGT TCACCTTCGACGGGGTCTCCGCGTCCGCGGTGCTCAGCGGCGTGGTGGCCGCCTTCCTGTCCTGGGCCGGTTTCGAGGCC TGCGCCTCGATGGGCGAGGAGACCGACGATCCCCGCCGCAACATCCCCCGCGCCCTCGGCGGCACCCTGCTGCTCACCGG TGTGCTATTCGTCGTCGTGATGTTCGCCCAGGTCATCGGGTTCGGCACCGACGAGGCCGGCCTGGCCGCCTTCCAGGGCT CCGGGAACACGCTGGGCGACTTGGGCAGCACCTATGTCGGACAGTGGTTCTCGCTGTTGATCATCTTCACCGCGACGGTC GCGGCGTTCGGCTGCCACCTGGCCACCTCGGCCACCTCCGGTCGCATGCTCTACGCGTTCGGCCGCGACGGGTTCGGTCC GAAAGCGTTGGCGCACATCCACGCCGAGACCGGTGGCCCGCGGCGGGCCACCTGGCTGGTCGTCGGCGTGGCACTGGTCG TCGACCTGATCTGCGGTGCGCTCGACTGGCCCGACATGGGCACCGGCAACGACGCGATCGACACCTACTTCCTGTTCGCC GTCGCGGGTTCGGTGTGCCTGATGGTGTGCTACCTGCTGGTCGAGATCGCCGCGGCCTGGTTCGTCGGCGCACCGAAGTT CGTCGGTGTGCACGGCGGGACGGGCAAGGTGCTCGGTCTGCTGCTGCCACTGCTCGGCGCGGTGGTGATCGCGGTGGTGT TGTGGTTCAACGTCAAGGACGCCGAGACGTGGTCGGCCGCACCGCTTCTCGGATTGTACTGGTGCGCAATCGGTTTGATC ATCGCGCTGGCAGCGTCCGGAATCGCCAAACGGGTCGGTGAGTCGCTGAGCCGTGAGCTCGAGCTCAGCCCGCCGGACGG CCGACCGGTCAGCTGA
Upstream 100 bases:
>100_bases TCATCGAGGCGCTGATCGCCGTCCGGCGCCACGAGCTGACCACCTACGGCGACCGTCCGCCCGCCGAGACCACCCAGGCG CTGCGCCTCGCCTGGAGCTG
Downstream 100 bases:
>100_bases GAGCCGCCGGTGGGCTACGTTGGCGGCGACGGGGCCGCAGGGAAGGTCGACGACGAGGAGGTCGCGAAGTATGCCGGTTG GTGATCGCACCGATGTGTTC
Product: amino acid permease-associated protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 510
Protein sequence:
>511_residues MTTAERKPPMTQTPPETNLAPETDQLPHRRLPFWVALAMSVALVGPTLAMSGNGQGLIGTVGKAIPLVFLIGLIGVSLVG YSFVRLTRHLNHAGSAYGLVGGTIGPRAGFFSGFAMLGAYVGFSIGTLALTAAFTNAFIAQLQPDAEDPYQVPWLLVVLV GAGISFLLAGRDIRLLAKILLGIEGIGILAMVILVAVIFAKGGAPTTGVDFSVFTFDGVSASAVLSGVVAAFLSWAGFEA CASMGEETDDPRRNIPRALGGTLLLTGVLFVVVMFAQVIGFGTDEAGLAAFQGSGNTLGDLGSTYVGQWFSLLIIFTATV AAFGCHLATSATSGRMLYAFGRDGFGPKALAHIHAETGGPRRATWLVVGVALVVDLICGALDWPDMGTGNDAIDTYFLFA VAGSVCLMVCYLLVEIAAAWFVGAPKFVGVHGGTGKVLGLLLPLLGAVVIAVVLWFNVKDAETWSAAPLLGLYWCAIGLI IALAASGIAKRVGESLSRELELSPPDGRPVS
Sequences:
>Translated_511_residues MTTAERKPPMTQTPPETNLAPETDQLPHRRLPFWVALAMSVALVGPTLAMSGNGQGLIGTVGKAIPLVFLIGLIGVSLVG YSFVRLTRHLNHAGSAYGLVGGTIGPRAGFFSGFAMLGAYVGFSIGTLALTAAFTNAFIAQLQPDAEDPYQVPWLLVVLV GAGISFLLAGRDIRLLAKILLGIEGIGILAMVILVAVIFAKGGAPTTGVDFSVFTFDGVSASAVLSGVVAAFLSWAGFEA CASMGEETDDPRRNIPRALGGTLLLTGVLFVVVMFAQVIGFGTDEAGLAAFQGSGNTLGDLGSTYVGQWFSLLIIFTATV AAFGCHLATSATSGRMLYAFGRDGFGPKALAHIHAETGGPRRATWLVVGVALVVDLICGALDWPDMGTGNDAIDTYFLFA VAGSVCLMVCYLLVEIAAAWFVGAPKFVGVHGGTGKVLGLLLPLLGAVVIAVVLWFNVKDAETWSAAPLLGLYWCAIGLI IALAASGIAKRVGESLSRELELSPPDGRPVS >Mature_510_residues TTAERKPPMTQTPPETNLAPETDQLPHRRLPFWVALAMSVALVGPTLAMSGNGQGLIGTVGKAIPLVFLIGLIGVSLVGY SFVRLTRHLNHAGSAYGLVGGTIGPRAGFFSGFAMLGAYVGFSIGTLALTAAFTNAFIAQLQPDAEDPYQVPWLLVVLVG AGISFLLAGRDIRLLAKILLGIEGIGILAMVILVAVIFAKGGAPTTGVDFSVFTFDGVSASAVLSGVVAAFLSWAGFEAC ASMGEETDDPRRNIPRALGGTLLLTGVLFVVVMFAQVIGFGTDEAGLAAFQGSGNTLGDLGSTYVGQWFSLLIIFTATVA AFGCHLATSATSGRMLYAFGRDGFGPKALAHIHAETGGPRRATWLVVGVALVVDLICGALDWPDMGTGNDAIDTYFLFAV AGSVCLMVCYLLVEIAAAWFVGAPKFVGVHGGTGKVLGLLLPLLGAVVIAVVLWFNVKDAETWSAAPLLGLYWCAIGLII ALAASGIAKRVGESLSRELELSPPDGRPVS
Specific function: Imports putrescine [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081869, Length=469, Percent_Identity=25.1599147121535, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI87082023, Length=475, Percent_Identity=23.7894736842105, Blast_Score=85, Evalue=1e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 52974; Mature: 52842
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAERKPPMTQTPPETNLAPETDQLPHRRLPFWVALAMSVALVGPTLAMSGNGQGLIGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHH VGKAIPLVFLIGLIGVSLVGYSFVRLTRHLNHAGSAYGLVGGTIGPRAGFFSGFAMLGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHH VGFSIGTLALTAAFTNAFIAQLQPDAEDPYQVPWLLVVLVGAGISFLLAGRDIRLLAKIL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHH LGIEGIGILAMVILVAVIFAKGGAPTTGVDFSVFTFDGVSASAVLSGVVAAFLSWAGFEA HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH CASMGEETDDPRRNIPRALGGTLLLTGVLFVVVMFAQVIGFGTDEAGLAAFQGSGNTLGD HHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH LGSTYVGQWFSLLIIFTATVAAFGCHLATSATSGRMLYAFGRDGFGPKALAHIHAETGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHEEECCCCCC RRATWLVVGVALVVDLICGALDWPDMGTGNDAIDTYFLFAVAGSVCLMVCYLLVEIAAAW CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGAPKFVGVHGGTGKVLGLLLPLLGAVVIAVVLWFNVKDAETWSAAPLLGLYWCAIGLI HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH IALAASGIAKRVGESLSRELELSPPDGRPVS HHHHHHHHHHHHHHHHHCCEECCCCCCCCCC >Mature Secondary Structure TTAERKPPMTQTPPETNLAPETDQLPHRRLPFWVALAMSVALVGPTLAMSGNGQGLIGT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHH VGKAIPLVFLIGLIGVSLVGYSFVRLTRHLNHAGSAYGLVGGTIGPRAGFFSGFAMLGAY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHH VGFSIGTLALTAAFTNAFIAQLQPDAEDPYQVPWLLVVLVGAGISFLLAGRDIRLLAKIL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHCCCHHHHHHHHH LGIEGIGILAMVILVAVIFAKGGAPTTGVDFSVFTFDGVSASAVLSGVVAAFLSWAGFEA HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHH CASMGEETDDPRRNIPRALGGTLLLTGVLFVVVMFAQVIGFGTDEAGLAAFQGSGNTLGD HHHCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCHHH LGSTYVGQWFSLLIIFTATVAAFGCHLATSATSGRMLYAFGRDGFGPKALAHIHAETGGP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHEEECCCCCC RRATWLVVGVALVVDLICGALDWPDMGTGNDAIDTYFLFAVAGSVCLMVCYLLVEIAAAW CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVGAPKFVGVHGGTGKVLGLLLPLLGAVVIAVVLWFNVKDAETWSAAPLLGLYWCAIGLI HCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH IALAASGIAKRVGESLSRELELSPPDGRPVS HHHHHHHHHHHHHHHHHCCEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503 [H]