| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is glnA [H]
Identifier: 108797213
GI number: 108797213
Start: 259537
End: 260850
Strand: Reverse
Name: glnA [H]
Synonym: Mmcs_0233
Alternate gene names: 108797213
Gene position: 260850-259537 (Counterclockwise)
Preceding gene: 108797217
Following gene: 108797212
Centisome position: 4.57
GC content: 72.83
Gene sequence:
>1314_bases ATGCCGCAGCAGGACGAGGAGCTACGGGCGCAGGGCGTGGCGCTGATCGCCGGGTCGGTGACCGATCTGGCCGGCGTCAC GCGCGCGAAGTACGTCCCCGTCCGGCGGCTCCGCGCCTTCGAACAGTCGGGGATGGGCGTATCCCCCTCGTGGAGCGTGT TCTGCGTGGACAGCGGCATCGCGTTCACCCCCGACATCGGGGTCGCCGGAGACCTGCGGATCCGTATCGACGGCGAGCAC CTGCGCATCATCGAGGACGGAATTGCCTGGGCCCCGGGCGATCTGCACGACCAGTACGGCCGTCCCGCCCCGCTGTGCCC GCGCTCGCTGCTGGCCCGCGTCGAGCAGCGGGCCGCCGAACGCGGTCTGGAGGTCCGCGTCGGCGGTGAGCTCGAGTGCA CGATGCTGGCCGCCGACAGTGGGCCTGCGTCGGCCGAGCCGTGGTCGCCGTACGGAATCCGCACCTCGCTCGACCGTTCG GCGTTCCTCGTCGACCTCATCGGCGCGGCCGAACGCGCCGGTCTCGCCGTCGAACAGCTGCACACCGAATACGGGCACGA CCAGCTCGAGATGTCCCTGGCACCCGCCGGCCCCGTCGAGACCGCCGATGCGATCATCCTGGCGCGCATCGTGATCGGCC GCGCCGCCGCCCGCCACGGGATGAAGATCTCGTTCTCGCCGGTGCCCTTCGCCGACGCCGCAGGCAACGGCGCCCACCTC CACCTCTCGCTCACCGACAGCGCCGGTCCGCTGCTGTCCGGCGGCGACGGCCCCTACGGGATCCGGCCCGAAGGCAGTGC GGCCATCGCCGGTGTCCTCGACACCCTGCCGGACCTCCTCGGCGTCTACGCCGGTTCCGCACTGTCGGCCCTGCGGCTCA AACCGGGAAACTGGGCGGGCGCATCGGCGTGCTGGGGCCTGGAGAACCGGGAGGCCGCGGTCCGTTTCATCGCCGCCACG CCCGGAAACCCGCACGGCGCCAACGCCGAACTGAAACTCGTCGACCCGAGCGCCAACCCGTACCTGGCCGCCGCCGCGTT CCTCGGCAGCGCGCTGCACGGAATCGACCGCCGGCTCCCGCTGCCACCGGAGGTGCCCGAGGATCCGCGACGGTCGGGCG CCACCCCGCCCGCGCTGCCGACCGGACAGCAGGCGGCGCTCGAGGCGCTCGAGAACTCCGCCACCGCCGCCGAACTGCTC ACCACCCCGATCATCGAGGCGCTGATCGCCGTCCGGCGCCACGAGCTGACCACCTACGGCGACCGTCCGCCCGCCGAGAC CACCCAGGCGCTGCGCCTCGCCTGGAGCTGTTGA
Upstream 100 bases:
>100_bases ACAGCGGATTTAACGAATCAATCGCGGTGGACTGATTTTAAAGAACTTGAAACATTCATGACATAGGGTTCCCGAAGACT CGACCGCCGAGGAGGATTCG
Downstream 100 bases:
>100_bases CCACCGCCGAGAGGAAACCCCCGATGACCCAGACGCCGCCCGAGACCAACTTGGCACCCGAAACCGACCAGCTGCCGCAC CGCCGCCTGCCGTTCTGGGT
Product: glutamine synthetase catalytic subunit
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MPQQDEELRAQGVALIAGSVTDLAGVTRAKYVPVRRLRAFEQSGMGVSPSWSVFCVDSGIAFTPDIGVAGDLRIRIDGEH LRIIEDGIAWAPGDLHDQYGRPAPLCPRSLLARVEQRAAERGLEVRVGGELECTMLAADSGPASAEPWSPYGIRTSLDRS AFLVDLIGAAERAGLAVEQLHTEYGHDQLEMSLAPAGPVETADAIILARIVIGRAAARHGMKISFSPVPFADAAGNGAHL HLSLTDSAGPLLSGGDGPYGIRPEGSAAIAGVLDTLPDLLGVYAGSALSALRLKPGNWAGASACWGLENREAAVRFIAAT PGNPHGANAELKLVDPSANPYLAAAAFLGSALHGIDRRLPLPPEVPEDPRRSGATPPALPTGQQAALEALENSATAAELL TTPIIEALIAVRRHELTTYGDRPPAETTQALRLAWSC
Sequences:
>Translated_437_residues MPQQDEELRAQGVALIAGSVTDLAGVTRAKYVPVRRLRAFEQSGMGVSPSWSVFCVDSGIAFTPDIGVAGDLRIRIDGEH LRIIEDGIAWAPGDLHDQYGRPAPLCPRSLLARVEQRAAERGLEVRVGGELECTMLAADSGPASAEPWSPYGIRTSLDRS AFLVDLIGAAERAGLAVEQLHTEYGHDQLEMSLAPAGPVETADAIILARIVIGRAAARHGMKISFSPVPFADAAGNGAHL HLSLTDSAGPLLSGGDGPYGIRPEGSAAIAGVLDTLPDLLGVYAGSALSALRLKPGNWAGASACWGLENREAAVRFIAAT PGNPHGANAELKLVDPSANPYLAAAAFLGSALHGIDRRLPLPPEVPEDPRRSGATPPALPTGQQAALEALENSATAAELL TTPIIEALIAVRRHELTTYGDRPPAETTQALRLAWSC >Mature_436_residues PQQDEELRAQGVALIAGSVTDLAGVTRAKYVPVRRLRAFEQSGMGVSPSWSVFCVDSGIAFTPDIGVAGDLRIRIDGEHL RIIEDGIAWAPGDLHDQYGRPAPLCPRSLLARVEQRAAERGLEVRVGGELECTMLAADSGPASAEPWSPYGIRTSLDRSA FLVDLIGAAERAGLAVEQLHTEYGHDQLEMSLAPAGPVETADAIILARIVIGRAAARHGMKISFSPVPFADAAGNGAHLH LSLTDSAGPLLSGGDGPYGIRPEGSAAIAGVLDTLPDLLGVYAGSALSALRLKPGNWAGASACWGLENREAAVRFIAATP GNPHGANAELKLVDPSANPYLAAAAFLGSALHGIDRRLPLPPEVPEDPRRSGATPPALPTGQQAALEALENSATAAELLT TPIIEALIAVRRHELTTYGDRPPAETTQALRLAWSC
Specific function: Unknown
COG id: COG0174
COG function: function code E; Glutamine synthetase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family [H]
Homologues:
Organism=Escherichia coli, GI87081870, Length=404, Percent_Identity=27.970297029703, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1790301, Length=465, Percent_Identity=25.5913978494624, Blast_Score=87, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008147 - InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR004809 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF03951 Gln-synt_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 45727; Mature: 45596
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQQDEELRAQGVALIAGSVTDLAGVTRAKYVPVRRLRAFEQSGMGVSPSWSVFCVDSGI CCCCCHHHHHCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEECCC AFTPDIGVAGDLRIRIDGEHLRIIEDGIAWAPGDLHDQYGRPAPLCPRSLLARVEQRAAE EECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH RGLEVRVGGELECTMLAADSGPASAEPWSPYGIRTSLDRSAFLVDLIGAAERAGLAVEQL CCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHH HTEYGHDQLEMSLAPAGPVETADAIILARIVIGRAAARHGMKISFSPVPFADAAGNGAHL HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEE HLSLTDSAGPLLSGGDGPYGIRPEGSAAIAGVLDTLPDLLGVYAGSALSALRLKPGNWAG EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCC ASACWGLENREAAVRFIAATPGNPHGANAELKLVDPSANPYLAAAAFLGSALHGIDRRLP CHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC LPPEVPEDPRRSGATPPALPTGQQAALEALENSATAAELLTTPIIEALIAVRRHELTTYG CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DRPPAETTQALRLAWSC CCCCHHHHHHHHHCCCC >Mature Secondary Structure PQQDEELRAQGVALIAGSVTDLAGVTRAKYVPVRRLRAFEQSGMGVSPSWSVFCVDSGI CCCCHHHHHCCEEEEECCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEEECCC AFTPDIGVAGDLRIRIDGEHLRIIEDGIAWAPGDLHDQYGRPAPLCPRSLLARVEQRAAE EECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHH RGLEVRVGGELECTMLAADSGPASAEPWSPYGIRTSLDRSAFLVDLIGAAERAGLAVEQL CCCEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHH HTEYGHDQLEMSLAPAGPVETADAIILARIVIGRAAARHGMKISFSPVPFADAAGNGAHL HHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCEEE HLSLTDSAGPLLSGGDGPYGIRPEGSAAIAGVLDTLPDLLGVYAGSALSALRLKPGNWAG EEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHEEEECCCCCCC ASACWGLENREAAVRFIAATPGNPHGANAELKLVDPSANPYLAAAAFLGSALHGIDRRLP CHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHCCCC LPPEVPEDPRRSGATPPALPTGQQAALEALENSATAAELLTTPIIEALIAVRRHELTTYG CCCCCCCCHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC DRPPAETTQALRLAWSC CCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]