Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
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Accession | NC_008095 |
Length | 9,139,763 |
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The map label for this gene is dhbC [H]
Identifier: 108763046
GI number: 108763046
Start: 4348746
End: 4349990
Strand: Reverse
Name: dhbC [H]
Synonym: MXAN_3646
Alternate gene names: 108763046
Gene position: 4349990-4348746 (Counterclockwise)
Preceding gene: 108759915
Following gene: 108757791
Centisome position: 47.59
GC content: 71.73
Gene sequence:
>1245_bases ATGACGCCCGCTGAGCCGAAGGAACAGGAACACCCCATGGGACCGCAGACACTCGCCGCGCAGTTGCTCGAGAGCTACGA GGCTGGCTCTTCGTTCTTCTTCGCCACGCCGCGCCGCACGCTGCTGGCGCGCGGCACCTTTGCTACCGTGCCACACCAGG GCGGCGCGGATGCCCTGGCGCGGCTCCCCGTGCGCGTGACGGCGGTGCTGAATGACGCGCGCCAGGCCGACCACGACATC CCCGTGGCGGTGGGCGCGGTGCCCTTCGACGGCTCGGTACCCGCACAGCTCGTGGTGCCGCTGACGCTCCAGCGCGCCGG GCCGCTGGTGTTCGACAAGGACGTCCCGGTGCAGCGGCCGTTCAGCGCCAGCTACACCGTCCAGCCGGTGCCGGAGCCCG CCGCGTACCTGAACGGCGTCGCGCAGGCCCTGAAGCTGATGCAGAGCGGGCCGCTCCAGAAGGTGGTGCTGTCACGTTCG CTGCACCTCAACGCCGCCGCCCCCATCGACCTGCGGCAGCTGCTGCGCAACCTCGCGCAGCGCAACCCGTCGGGCTACAC CTTCGCCGCCGACCTCCCCCAGCAGGATGGGACCCGCGGCGCGGGACTTCGCACGCTCATTGGCGCCAGCCCCGAGCTGC TCGTGTCCCGCTCCGGGTTCCAGGTGGTCGCCAATCCCCTGGCCGGCTCCGCGGCCCGCAGCGCGGATCCGCTGGAGGAC CAGGAGCGCGCCGCCGCGCTGCTGAAGTCGCCCAAGGACCTGCACGAGCACGCGGTGGTCATCGACGCCGTCGCGGAGGC GCTGCGGCCGTACTGCAAGACGCTGAACGTGCCCGCCGGTCCGTCGCTCGTGAACACCGCCACCATGTGGCACCTGTCCA GCCGCATCACCGGTGAGCTGGCCGACCCCTCCATCTCCTCGCTGACGCTGGCGGCGGCCATGCACCCGACGCCGGCGGTG TGCGGCTATCCTACACGGCTGGCGCACGAGGCGATTGGCTCCATCGAGCCCTTCGAGCGCGGCTACTACACCGGCACGGT GGGCTGGTGCGACGCCACGGGTGATGGGCAGTGGGCGGTGACCATCCGTTGCGCGGAGGCCAGTGAGCGCACCCTGCGCA TCTTCGCGGGCGCGGGCATCGTGGTGGGCTCCACGCCCGAGTCCGAGCTGGCGGAGACCGAGGCCAAGTTCCGCACCATG CTCCACGCCATGGGCCTGGGCCACGGTGCCGGGGTGCAGTCATGA
Upstream 100 bases:
>100_bases TGCGGCCCGCCCAGGCCCTCGTCCGCCACGGAGTTGATAATGATTACTAGGATCCAATTCACCAACTACCACCGAGGCGC CGCCATGTGGCGCCCTGTGC
Downstream 100 bases:
>100_bases CGTCCCCCGCCCTCCCTGGCTGCCCCACCTGGCCGGAGGCCTACGCCGCCCGCTACCGCGAGGCTGGCTACTGGCGCAGT GAAACGTTCGGCCAGCTCCT
Product: isochorismate synthase DhbC
Products: NA
Alternate protein names: Isochorismate mutase [H]
Number of amino acids: Translated: 414; Mature: 413
Protein sequence:
>414_residues MTPAEPKEQEHPMGPQTLAAQLLESYEAGSSFFFATPRRTLLARGTFATVPHQGGADALARLPVRVTAVLNDARQADHDI PVAVGAVPFDGSVPAQLVVPLTLQRAGPLVFDKDVPVQRPFSASYTVQPVPEPAAYLNGVAQALKLMQSGPLQKVVLSRS LHLNAAAPIDLRQLLRNLAQRNPSGYTFAADLPQQDGTRGAGLRTLIGASPELLVSRSGFQVVANPLAGSAARSADPLED QERAAALLKSPKDLHEHAVVIDAVAEALRPYCKTLNVPAGPSLVNTATMWHLSSRITGELADPSISSLTLAAAMHPTPAV CGYPTRLAHEAIGSIEPFERGYYTGTVGWCDATGDGQWAVTIRCAEASERTLRIFAGAGIVVGSTPESELAETEAKFRTM LHAMGLGHGAGVQS
Sequences:
>Translated_414_residues MTPAEPKEQEHPMGPQTLAAQLLESYEAGSSFFFATPRRTLLARGTFATVPHQGGADALARLPVRVTAVLNDARQADHDI PVAVGAVPFDGSVPAQLVVPLTLQRAGPLVFDKDVPVQRPFSASYTVQPVPEPAAYLNGVAQALKLMQSGPLQKVVLSRS LHLNAAAPIDLRQLLRNLAQRNPSGYTFAADLPQQDGTRGAGLRTLIGASPELLVSRSGFQVVANPLAGSAARSADPLED QERAAALLKSPKDLHEHAVVIDAVAEALRPYCKTLNVPAGPSLVNTATMWHLSSRITGELADPSISSLTLAAAMHPTPAV CGYPTRLAHEAIGSIEPFERGYYTGTVGWCDATGDGQWAVTIRCAEASERTLRIFAGAGIVVGSTPESELAETEAKFRTM LHAMGLGHGAGVQS >Mature_413_residues TPAEPKEQEHPMGPQTLAAQLLESYEAGSSFFFATPRRTLLARGTFATVPHQGGADALARLPVRVTAVLNDARQADHDIP VAVGAVPFDGSVPAQLVVPLTLQRAGPLVFDKDVPVQRPFSASYTVQPVPEPAAYLNGVAQALKLMQSGPLQKVVLSRSL HLNAAAPIDLRQLLRNLAQRNPSGYTFAADLPQQDGTRGAGLRTLIGASPELLVSRSGFQVVANPLAGSAARSADPLEDQ ERAAALLKSPKDLHEHAVVIDAVAEALRPYCKTLNVPAGPSLVNTATMWHLSSRITGELADPSISSLTLAAAMHPTPAVC GYPTRLAHEAIGSIEPFERGYYTGTVGWCDATGDGQWAVTIRCAEASERTLRIFAGAGIVVGSTPESELAETEAKFRTML HAMGLGHGAGVQS
Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]
COG id: COG1169
COG function: function code HQ; Isochorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the isochorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786809, Length=386, Percent_Identity=39.3782383419689, Blast_Score=252, Evalue=4e-68, Organism=Escherichia coli, GI87082077, Length=280, Percent_Identity=29.6428571428571, Blast_Score=110, Evalue=2e-25, Organism=Escherichia coli, GI1787518, Length=283, Percent_Identity=30.3886925795053, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1788114, Length=289, Percent_Identity=26.2975778546713, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6320935, Length=309, Percent_Identity=28.4789644012945, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6324361, Length=295, Percent_Identity=23.0508474576271, Blast_Score=75, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR015890 - InterPro: IPR004561 [H]
Pfam domain/function: PF00425 Chorismate_bind [H]
EC number: =5.4.4.2 [H]
Molecular weight: Translated: 43672; Mature: 43541
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAEPKEQEHPMGPQTLAAQLLESYEAGSSFFFATPRRTLLARGTFATVPHQGGADALA CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHEECCCEEECCCCCCHHHHH RLPVRVTAVLNDARQADHDIPVAVGAVPFDGSVPAQLVVPLTLQRAGPLVFDKDVPVQRP HCCCCEEEHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEHHCCCCEEEECCCCCCCC FSASYTVQPVPEPAAYLNGVAQALKLMQSGPLQKVVLSRSLHLNAAAPIDLRQLLRNLAQ CCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RNPSGYTFAADLPQQDGTRGAGLRTLIGASPELLVSRSGFQVVANPLAGSAARSADPLED CCCCCEEEEECCCCCCCCCCCCHHHHHCCCHHHEEECCCCEEEECCCCCCCCCCCCCCCH QERAAALLKSPKDLHEHAVVIDAVAEALRPYCKTLNVPAGPSLVNTATMWHLSSRITGEL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC ADPSISSLTLAAAMHPTPAVCGYPTRLAHEAIGSIEPFERGYYTGTVGWCDATGDGQWAV CCCCHHHEEEEHHCCCCCCCCCCHHHHHHHHHCCCCCHHCCEEECCEEEEECCCCCCEEE TIRCAEASERTLRIFAGAGIVVGSTPESELAETEAKFRTMLHAMGLGHGAGVQS EEEECCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TPAEPKEQEHPMGPQTLAAQLLESYEAGSSFFFATPRRTLLARGTFATVPHQGGADALA CCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHEECCCEEECCCCCCHHHHH RLPVRVTAVLNDARQADHDIPVAVGAVPFDGSVPAQLVVPLTLQRAGPLVFDKDVPVQRP HCCCCEEEHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEHHCCCCEEEECCCCCCCC FSASYTVQPVPEPAAYLNGVAQALKLMQSGPLQKVVLSRSLHLNAAAPIDLRQLLRNLAQ CCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH RNPSGYTFAADLPQQDGTRGAGLRTLIGASPELLVSRSGFQVVANPLAGSAARSADPLED CCCCCEEEEECCCCCCCCCCCCHHHHHCCCHHHEEECCCCEEEECCCCCCCCCCCCCCCH QERAAALLKSPKDLHEHAVVIDAVAEALRPYCKTLNVPAGPSLVNTATMWHLSSRITGEL HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCC ADPSISSLTLAAAMHPTPAVCGYPTRLAHEAIGSIEPFERGYYTGTVGWCDATGDGQWAV CCCCHHHEEEEHHCCCCCCCCCCHHHHHHHHHCCCCCHHCCEEECCEEEEECCCCCCEEE TIRCAEASERTLRIFAGAGIVVGSTPESELAETEAKFRTMLHAMGLGHGAGVQS EEEECCCCCCEEEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8550523; 9384377 [H]