BacMap

Definition	Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession	NC_008095
Length	9,139,763

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The map label for this gene is dhbA [H]

Identifier: 108759915

GI number: 108759915

Start: 4350102

End: 4350875

Strand: Reverse

Name: dhbA [H]

Synonym: MXAN_3647

Alternate gene names: 108759915

Gene position: 4350875-4350102 (Counterclockwise)

Preceding gene: 108758866

Following gene: 108763046

Centisome position: 47.6

GC content: 71.58

Gene sequence:

>774_bases
ATGGGAACGCCCACCCGGGTGGCACTCGTCACAGGTGCCGCACAAGGTATTGGCGCGGCAGTGGCACGTGCGCTGGCGGG
CGAAGCCCTCATCGCCGCGGTCGACACCAACGCGGACGGCCTGAGCGCCCTCGTGGCCGAGCTCCGGCAGAAGCATCAAC
ACGCGGTGGCCTACCCGGCCAGCGTGAGTGATGTCGCCGCGGTCGACGCCGTGGTGGAGCGCATCGAGCGGGAGCTGGGC
CCTATCGAGGTGCTGGCCAACGTGGCGGGCGTCCTGCGCACGGGCCCCATCCTGTCCTACAGCGACGAGGACTGGGCGTT
CACCTTCTCCGTCAACACGCTGGGCGTGTTCCAGGTGTCCCGCGCCGTGGCCCGGCGCATGGTGCCCCGCCGAAGCGGTG
TCATCGTCACCGTGGGCTCCAACGCCGCCGCCGTGCCCCGCACGCAGATGGCCGCGTACGCCGCCTCCAAGGCCGCCTCC
AGCATGTTCACCAAGTGCCTGGGCCTGGAGCTGGCCCCGCACGGCATCCGCTGCAACGTCGTGTCCCCCGGCTCCACGGA
CACCGCCATGCAGCGCGCGCTCTGGGCGGATGACTCCGGCGCGCAGGCGGTGATTGCCGGCTCGCCCGAGGCCTATCGCC
TGGGCATCCCCCTGCAACGCATCGCCACCCCCGAGGACATCGCCAACGCGGTGCGGTTCCTCGTCTCGGACGCGGCACGC
CACATCACCCTGCACGACCTCCGCGTCGACGGGGGCGCGACACTCGACGCCTGA

Upstream 100 bases:

>100_bases
GTGGCACATATCTGCGCCGACTCGATAATGAAAATCATTCTCATTATCTACTTACGGACGCAACAAGCGGGCGCAGGCAT
CCAGAAGGAGGAGCAGGGAC

Downstream 100 bases:

>100_bases
CCCCACCCTCGTGCGGCCCGCCCAGGCCCTCGTCCGCCACGGAGTTGATAATGATTACTAGGATCCAATTCACCAACTAC
CACCGAGGCGCCGCCATGTG

Product: 2,3-dihydroxybenzoate-2,3-dehydrogenase

Products: NA

Alternate protein names: Cold shock protein CSI14 [H]

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGTPTRVALVTGAAQGIGAAVARALAGEALIAAVDTNADGLSALVAELRQKHQHAVAYPASVSDVAAVDAVVERIERELG
PIEVLANVAGVLRTGPILSYSDEDWAFTFSVNTLGVFQVSRAVARRMVPRRSGVIVTVGSNAAAVPRTQMAAYAASKAAS
SMFTKCLGLELAPHGIRCNVVSPGSTDTAMQRALWADDSGAQAVIAGSPEAYRLGIPLQRIATPEDIANAVRFLVSDAAR
HITLHDLRVDGGATLDA

Sequences:

>Translated_257_residues
MGTPTRVALVTGAAQGIGAAVARALAGEALIAAVDTNADGLSALVAELRQKHQHAVAYPASVSDVAAVDAVVERIERELG
PIEVLANVAGVLRTGPILSYSDEDWAFTFSVNTLGVFQVSRAVARRMVPRRSGVIVTVGSNAAAVPRTQMAAYAASKAAS
SMFTKCLGLELAPHGIRCNVVSPGSTDTAMQRALWADDSGAQAVIAGSPEAYRLGIPLQRIATPEDIANAVRFLVSDAAR
HITLHDLRVDGGATLDA
>Mature_256_residues
GTPTRVALVTGAAQGIGAAVARALAGEALIAAVDTNADGLSALVAELRQKHQHAVAYPASVSDVAAVDAVVERIERELGP
IEVLANVAGVLRTGPILSYSDEDWAFTFSVNTLGVFQVSRAVARRMVPRRSGVIVTVGSNAAAVPRTQMAAYAASKAASS
MFTKCLGLELAPHGIRCNVVSPGSTDTAMQRALWADDSGAQAVIAGSPEAYRLGIPLQRIATPEDIANAVRFLVSDAARH
ITLHDLRVDGGATLDA

Specific function: Siderophore biosynthesis; enterobactin biosynthesis. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7705925, Length=250, Percent_Identity=36, Blast_Score=114, Evalue=6e-26,
Organism=Homo sapiens, GI40254992, Length=251, Percent_Identity=31.8725099601594, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI15277342, Length=257, Percent_Identity=33.852140077821, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=31.2, Blast_Score=99, Evalue=3e-21,
Organism=Homo sapiens, GI66933014, Length=217, Percent_Identity=29.4930875576037, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI19923817, Length=260, Percent_Identity=30.3846153846154, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI210032110, Length=197, Percent_Identity=28.9340101522843, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=27.6679841897233, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI4504505, Length=211, Percent_Identity=32.2274881516588, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI109715829, Length=253, Percent_Identity=28.8537549407115, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI5031737, Length=252, Percent_Identity=29.7619047619048, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI4503817, Length=186, Percent_Identity=31.7204301075269, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI31542939, Length=247, Percent_Identity=27.9352226720648, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI142976729, Length=191, Percent_Identity=28.2722513089005, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI20149619, Length=201, Percent_Identity=29.3532338308458, Blast_Score=72, Evalue=7e-13,
Organism=Homo sapiens, GI10190704, Length=255, Percent_Identity=27.0588235294118, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI59889578, Length=212, Percent_Identity=28.7735849056604, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4758504, Length=202, Percent_Identity=29.7029702970297, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=44.758064516129, Blast_Score=192, Evalue=1e-50,
Organism=Escherichia coli, GI1790717, Length=245, Percent_Identity=36.734693877551, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1787335, Length=253, Percent_Identity=37.1541501976285, Blast_Score=144, Evalue=7e-36,
Organism=Escherichia coli, GI87082100, Length=261, Percent_Identity=35.632183908046, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI1788459, Length=253, Percent_Identity=30.8300395256917, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1789208, Length=248, Percent_Identity=26.6129032258064, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI87082160, Length=250, Percent_Identity=27.6, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=32.4110671936759, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1787905, Length=250, Percent_Identity=31.2, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789378, Length=257, Percent_Identity=29.5719844357977, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1789057, Length=259, Percent_Identity=25.0965250965251, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787820, Length=246, Percent_Identity=27.6422764227642, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI2367365, Length=253, Percent_Identity=29.2490118577075, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=250, Percent_Identity=32, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=251, Percent_Identity=31.4741035856574, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=35.6275303643725, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI25147288, Length=255, Percent_Identity=31.7647058823529, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17555706, Length=259, Percent_Identity=30.8880308880309, Blast_Score=94, Evalue=9e-20,
Organism=Caenorhabditis elegans, GI17561402, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=27.3092369477912, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17560332, Length=271, Percent_Identity=31.3653136531365, Blast_Score=85, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17562990, Length=259, Percent_Identity=30.1158301158301, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560150, Length=264, Percent_Identity=28.030303030303, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=29.3436293436293, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=29.0566037735849, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=29.9242424242424, Blast_Score=77, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17508651, Length=255, Percent_Identity=30.9803921568627, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=260, Percent_Identity=29.6153846153846, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=261, Percent_Identity=28.3524904214559, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17559104, Length=269, Percent_Identity=27.8810408921933, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=268, Percent_Identity=28.7313432835821, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=28.7878787878788, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17562904, Length=265, Percent_Identity=26.0377358490566, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=263, Percent_Identity=28.1368821292776, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17536651, Length=260, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=27.3408239700375, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17508895, Length=189, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17568967, Length=203, Percent_Identity=31.5270935960591, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538486, Length=272, Percent_Identity=28.3088235294118, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17538182, Length=261, Percent_Identity=27.9693486590038, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193203117, Length=188, Percent_Identity=27.1276595744681, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=262, Percent_Identity=25.1908396946565, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193203115, Length=188, Percent_Identity=27.1276595744681, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17551412, Length=262, Percent_Identity=25.9541984732824, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17536025, Length=260, Percent_Identity=29.2307692307692, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=188, Percent_Identity=26.5957446808511, Blast_Score=64, Evalue=3e-11,
Organism=Drosophila melanogaster, GI23397609, Length=254, Percent_Identity=33.0708661417323, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24639444, Length=251, Percent_Identity=33.0677290836653, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21357041, Length=249, Percent_Identity=32.1285140562249, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI24644339, Length=257, Percent_Identity=32.295719844358, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21355319, Length=252, Percent_Identity=30.1587301587302, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI28571526, Length=256, Percent_Identity=31.640625, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI24643142, Length=257, Percent_Identity=29.9610894941634, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24584744, Length=189, Percent_Identity=33.8624338624339, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI161076933, Length=189, Percent_Identity=35.4497354497354, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28574402, Length=189, Percent_Identity=33.8624338624339, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24584748, Length=189, Percent_Identity=35.4497354497354, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24644337, Length=225, Percent_Identity=28.4444444444444, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI116007236, Length=255, Percent_Identity=28.2352941176471, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24584752, Length=191, Percent_Identity=31.413612565445, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24649181, Length=168, Percent_Identity=30.3571428571429, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24665247, Length=192, Percent_Identity=31.7708333333333, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24640492, Length=192, Percent_Identity=25, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI221331216, Length=192, Percent_Identity=31.7708333333333, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI18859837, Length=188, Percent_Identity=29.2553191489362, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007234, Length=258, Percent_Identity=28.2945736434109, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24665243, Length=191, Percent_Identity=31.413612565445, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221331218, Length=191, Percent_Identity=31.413612565445, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI17737361, Length=263, Percent_Identity=28.8973384030418, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI28571387, Length=195, Percent_Identity=31.7948717948718, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI281364892, Length=193, Percent_Identity=28.4974093264249, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI116007238, Length=195, Percent_Identity=28.7179487179487, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356301, Length=189, Percent_Identity=29.1005291005291, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24640442, Length=213, Percent_Identity=28.6384976525822, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21355631, Length=169, Percent_Identity=29.585798816568, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24581726, Length=190, Percent_Identity=26.8421052631579, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR003560
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.3.1.28 [H]

Molecular weight: Translated: 26590; Mature: 26458

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTPTRVALVTGAAQGIGAAVARALAGEALIAAVDTNADGLSALVAELRQKHQHAVAYPA
CCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEECCC
SVSDVAAVDAVVERIERELGPIEVLANVAGVLRTGPILSYSDEDWAFTFSVNTLGVFQVS
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEEECCHHHHHHH
RAVARRMVPRRSGVIVTVGSNAAAVPRTQMAAYAASKAASSMFTKCLGLELAPHGIRCNV
HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEE
VSPGSTDTAMQRALWADDSGAQAVIAGSPEAYRLGIPLQRIATPEDIANAVRFLVSDAAR
ECCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHH
HITLHDLRVDGGATLDA
EEEEEEEEECCCCCCCC
>Mature Secondary Structure 
GTPTRVALVTGAAQGIGAAVARALAGEALIAAVDTNADGLSALVAELRQKHQHAVAYPA
CCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHEECCC
SVSDVAAVDAVVERIERELGPIEVLANVAGVLRTGPILSYSDEDWAFTFSVNTLGVFQVS
CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEEEEECCHHHHHHH
RAVARRMVPRRSGVIVTVGSNAAAVPRTQMAAYAASKAASSMFTKCLGLELAPHGIRCNV
HHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEE
VSPGSTDTAMQRALWADDSGAQAVIAGSPEAYRLGIPLQRIATPEDIANAVRFLVSDAAR
ECCCCCHHHHHHHHCCCCCCCEEEEECCCCEEEECCCHHHHCCHHHHHHHHHHHHHHHHH
HITLHDLRVDGGATLDA
EEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8921902; 9384377; 8224884 [H]