| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dhbE [H]
Identifier: 108757791
GI number: 108757791
Start: 4347103
End: 4348749
Strand: Reverse
Name: dhbE [H]
Synonym: MXAN_3645
Alternate gene names: 108757791
Gene position: 4348749-4347103 (Counterclockwise)
Preceding gene: 108763046
Following gene: 108759754
Centisome position: 47.58
GC content: 70.55
Gene sequence:
>1647_bases ATGACGTCCCCCGCCCTCCCTGGCTGCCCCACCTGGCCGGAGGCCTACGCCGCCCGCTACCGCGAGGCTGGCTACTGGCG CAGTGAAACGTTCGGCCAGCTCCTCCACGAACGCGCCCAGCGTCACGGCGAGCGGACCGCACTGGTGGCCGGAGAGCGTC GCCTCACCTACGCCAACCTGGACGCCCGCGTCAGCCAGCTGGCCGCCGGCTTCCATGCCCTGGGCATCCAGGCTCGGGAC CGGGTGGTGGTGCAGCTGCCCAACGTGGCCGAGTTCTTCGAGGTCATCTTCGCCCTCTTCCGACTGGGCGCGCTGCCGGT GTTCGCGCTTCCCGCGCACCGCGCTTCGGAGATTGGCTACTTCTGCGCCTTCACGGAGGCGGTGGCCTACGTCATCGCGG ACAAGCAGGCCGGCTTCGACTACCGCACCCTGGCTGAGCAGGTGCGCGGCACCTGCCCGACGCTGAAACACGTCATCGTC GCCGGTGACGCAGGCCCCTTCACGGCACTGAGCAGCCTGTACGCCGCGCCCACGGCGCTGCCGCCAGGGCCCGCGCCCAG CGACGTGGCCTTCTTCCAGCTCTCCGGCGGAAGCACGGGCGTGCCCAAGCTCATCCCGCGCACGCACGACGACTACATCT ACAGCCTGCGCGGCAGCGTGGACATCTGCCAGCTCGACGAGACGAGCGTGTACCTGTGCGCGCTGCCCGCGGCGCACAAC TTTCCGCTCAGCTCGCCGGGCGTGCTGGGCACCTTCTACGCGGGCGGCACGGCGGTGCTGGCGCCCAACTCCAGCCCGGA CACGGTGTTCCCGATCATCGAGCGTGAGCGCGTCACCATCACCGCGGTGGTGCCACCACTGGCCATGGTCTGGATGGACG CGGCCAAGACGCGCCGGCACCAGCTCGCCAGCCTGCGGGTGCTCCAGGTCGGTGGCGCGCGCCTCAGCACCGAGGCGGCC ATGCGGGTGAAGCCCACGCTGGGCTGCACGCTCCAGCAGGTGTTCGGCATGGCCGAGGGCCTGGTCAACTACACGCGCCT GGATGACCCCGAGGACGTCATCGTCAGCACCCAGGGCCGGCCCATCTCCCCGGACGACGAAATCCGGGTGGTGGACGAGG ACGGCGAAGACGTAGCGCCGGGCGAGACGGGCCAGTTGCTGACGCGCGGGCCGTACACCATCCGCGGCTACTACAAGGCG GAGGCCCACAACGCGAAGGCCTTCACCGACGACGGCTTCTACCACACCGGTGACGTGGTCCGCGTGACGCCCCAGGGCTA CCTGGTGGTGGAGGGCCGCGCCAAGGATCAGATCAACCGGGGCGGCGACAAGGTCGCGGCCGAGGAGGTGGAAAACCATC TGCTGGCCCACCCCGACGTGCACGACGCCGCGGTGGTCGCCGTTCCGGACGCGTTCCTCGGCGAGCGCACCTGCGCCTTC GTCATCGCGCGCGGCACGCCGCCAGCGCCCAATGTGCTCACGGCCTTCCTGCGCCAGCGTGGTCTGGCCGCCTTCAAGAT TCCCGACCGGGTCGAGTTCGTCGAGGCGTTCCCCAAGACGGGCGTCGGCAAGGTCAGCAAGAAGGCGCTGCGCGACGTGC TCGCCGGCGCTCCCTCCCCCACTCCGGTTTCGCGCGCGACGCGCTGA
Upstream 100 bases:
>100_bases TGGTGGGCTCCACGCCCGAGTCCGAGCTGGCGGAGACCGAGGCCAAGTTCCGCACCATGCTCCACGCCATGGGCCTGGGC CACGGTGCCGGGGTGCAGTC
Downstream 100 bases:
>100_bases AAGGAACTCCCCATGGCGCTCCCCGCCATCGCTCCCTATCCCATGCCCGGCACCACCGACCTGCCGAAGAACAAGGTCTC CTGGACGCCGGACCCGAGCC
Product: 2,3-dihydroxybenzoate-AMP ligase
Products: NA
Alternate protein names: Dihydroxybenzoic acid-activating enzyme [H]
Number of amino acids: Translated: 548; Mature: 547
Protein sequence:
>548_residues MTSPALPGCPTWPEAYAARYREAGYWRSETFGQLLHERAQRHGERTALVAGERRLTYANLDARVSQLAAGFHALGIQARD RVVVQLPNVAEFFEVIFALFRLGALPVFALPAHRASEIGYFCAFTEAVAYVIADKQAGFDYRTLAEQVRGTCPTLKHVIV AGDAGPFTALSSLYAAPTALPPGPAPSDVAFFQLSGGSTGVPKLIPRTHDDYIYSLRGSVDICQLDETSVYLCALPAAHN FPLSSPGVLGTFYAGGTAVLAPNSSPDTVFPIIERERVTITAVVPPLAMVWMDAAKTRRHQLASLRVLQVGGARLSTEAA MRVKPTLGCTLQQVFGMAEGLVNYTRLDDPEDVIVSTQGRPISPDDEIRVVDEDGEDVAPGETGQLLTRGPYTIRGYYKA EAHNAKAFTDDGFYHTGDVVRVTPQGYLVVEGRAKDQINRGGDKVAAEEVENHLLAHPDVHDAAVVAVPDAFLGERTCAF VIARGTPPAPNVLTAFLRQRGLAAFKIPDRVEFVEAFPKTGVGKVSKKALRDVLAGAPSPTPVSRATR
Sequences:
>Translated_548_residues MTSPALPGCPTWPEAYAARYREAGYWRSETFGQLLHERAQRHGERTALVAGERRLTYANLDARVSQLAAGFHALGIQARD RVVVQLPNVAEFFEVIFALFRLGALPVFALPAHRASEIGYFCAFTEAVAYVIADKQAGFDYRTLAEQVRGTCPTLKHVIV AGDAGPFTALSSLYAAPTALPPGPAPSDVAFFQLSGGSTGVPKLIPRTHDDYIYSLRGSVDICQLDETSVYLCALPAAHN FPLSSPGVLGTFYAGGTAVLAPNSSPDTVFPIIERERVTITAVVPPLAMVWMDAAKTRRHQLASLRVLQVGGARLSTEAA MRVKPTLGCTLQQVFGMAEGLVNYTRLDDPEDVIVSTQGRPISPDDEIRVVDEDGEDVAPGETGQLLTRGPYTIRGYYKA EAHNAKAFTDDGFYHTGDVVRVTPQGYLVVEGRAKDQINRGGDKVAAEEVENHLLAHPDVHDAAVVAVPDAFLGERTCAF VIARGTPPAPNVLTAFLRQRGLAAFKIPDRVEFVEAFPKTGVGKVSKKALRDVLAGAPSPTPVSRATR >Mature_547_residues TSPALPGCPTWPEAYAARYREAGYWRSETFGQLLHERAQRHGERTALVAGERRLTYANLDARVSQLAAGFHALGIQARDR VVVQLPNVAEFFEVIFALFRLGALPVFALPAHRASEIGYFCAFTEAVAYVIADKQAGFDYRTLAEQVRGTCPTLKHVIVA GDAGPFTALSSLYAAPTALPPGPAPSDVAFFQLSGGSTGVPKLIPRTHDDYIYSLRGSVDICQLDETSVYLCALPAAHNF PLSSPGVLGTFYAGGTAVLAPNSSPDTVFPIIERERVTITAVVPPLAMVWMDAAKTRRHQLASLRVLQVGGARLSTEAAM RVKPTLGCTLQQVFGMAEGLVNYTRLDDPEDVIVSTQGRPISPDDEIRVVDEDGEDVAPGETGQLLTRGPYTIRGYYKAE AHNAKAFTDDGFYHTGDVVRVTPQGYLVVEGRAKDQINRGGDKVAAEEVENHLLAHPDVHDAAVVAVPDAFLGERTCAFV IARGTPPAPNVLTAFLRQRGLAAFKIPDRVEFVEAFPKTGVGKVSKKALRDVLAGAPSPTPVSRATR
Specific function: Activation of the carboxylate group of 2,3-dihydroxy- benzoate (DHB), via ATP-dependent PPi exchange reactions, to the acyladenylate [H]
COG id: COG1021
COG function: function code Q; Peptide arylation enzymes
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI187761345, Length=545, Percent_Identity=29.1743119266055, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI187761343, Length=545, Percent_Identity=29.1743119266055, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI156151445, Length=556, Percent_Identity=25.3597122302158, Blast_Score=135, Evalue=8e-32, Organism=Homo sapiens, GI38505220, Length=479, Percent_Identity=25.2609603340292, Blast_Score=126, Evalue=5e-29, Organism=Homo sapiens, GI122937307, Length=484, Percent_Identity=25, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI115511026, Length=511, Percent_Identity=26.027397260274, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI157311624, Length=492, Percent_Identity=25.2032520325203, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI157311622, Length=492, Percent_Identity=25.2032520325203, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI28416953, Length=556, Percent_Identity=23.021582733813, Blast_Score=103, Evalue=4e-22, Organism=Homo sapiens, GI58082049, Length=488, Percent_Identity=25, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI42544132, Length=513, Percent_Identity=22.4171539961014, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI40807491, Length=376, Percent_Identity=25.7978723404255, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI57165410, Length=366, Percent_Identity=23.7704918032787, Blast_Score=78, Evalue=2e-14, Organism=Homo sapiens, GI57165412, Length=366, Percent_Identity=23.7704918032787, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI8923896, Length=551, Percent_Identity=22.5045372050817, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1786810, Length=532, Percent_Identity=48.4962406015038, Blast_Score=499, Evalue=1e-142, Organism=Escherichia coli, GI145693145, Length=543, Percent_Identity=29.2817679558011, Blast_Score=215, Evalue=5e-57, Organism=Escherichia coli, GI1788107, Length=549, Percent_Identity=26.5938069216758, Blast_Score=157, Evalue=2e-39, Organism=Escherichia coli, GI221142682, Length=524, Percent_Identity=25.381679389313, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1786529, Length=569, Percent_Identity=24.0773286467487, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1790505, Length=565, Percent_Identity=23.5398230088496, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI1789201, Length=350, Percent_Identity=24.2857142857143, Blast_Score=86, Evalue=8e-18, Organism=Caenorhabditis elegans, GI17531443, Length=531, Percent_Identity=26.3653483992467, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17560308, Length=552, Percent_Identity=27.3550724637681, Blast_Score=142, Evalue=5e-34, Organism=Caenorhabditis elegans, GI17557194, Length=518, Percent_Identity=26.0617760617761, Blast_Score=138, Evalue=8e-33, Organism=Caenorhabditis elegans, GI17538037, Length=513, Percent_Identity=26.1208576998051, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI71994703, Length=526, Percent_Identity=26.615969581749, Blast_Score=129, Evalue=3e-30, Organism=Caenorhabditis elegans, GI71994694, Length=526, Percent_Identity=26.615969581749, Blast_Score=129, Evalue=6e-30, Organism=Caenorhabditis elegans, GI71994690, Length=526, Percent_Identity=26.615969581749, Blast_Score=128, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17559526, Length=519, Percent_Identity=23.6994219653179, Blast_Score=110, Evalue=1e-24, Organism=Caenorhabditis elegans, GI32563687, Length=502, Percent_Identity=22.9083665338645, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI17558820, Length=489, Percent_Identity=22.4948875255624, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71996755, Length=520, Percent_Identity=23.4615384615385, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71983001, Length=549, Percent_Identity=24.0437158469945, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI71982997, Length=549, Percent_Identity=24.0437158469945, Blast_Score=86, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71985884, Length=389, Percent_Identity=25.9640102827763, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17560140, Length=368, Percent_Identity=25, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193209603, Length=446, Percent_Identity=23.3183856502242, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17510401, Length=507, Percent_Identity=22.879684418146, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=364, Percent_Identity=25.5494505494505, Blast_Score=130, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6319264, Length=536, Percent_Identity=22.2014925373134, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6323903, Length=331, Percent_Identity=26.8882175226586, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581924, Length=554, Percent_Identity=27.0758122743682, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI21355181, Length=561, Percent_Identity=24.2424242424242, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI18859661, Length=549, Percent_Identity=23.6794171220401, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI24648253, Length=518, Percent_Identity=23.1660231660232, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI24648255, Length=518, Percent_Identity=23.3590733590734, Blast_Score=92, Evalue=8e-19, Organism=Drosophila melanogaster, GI24656500, Length=508, Percent_Identity=24.0157480314961, Blast_Score=92, Evalue=1e-18, Organism=Drosophila melanogaster, GI19922652, Length=521, Percent_Identity=22.4568138195777, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI62472339, Length=549, Percent_Identity=23.4972677595628, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667955, Length=549, Percent_Identity=23.4972677595628, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24648260, Length=512, Percent_Identity=24.4140625, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI21355225, Length=537, Percent_Identity=24.2085661080074, Blast_Score=90, Evalue=5e-18, Organism=Drosophila melanogaster, GI21356947, Length=377, Percent_Identity=23.0769230769231, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24667959, Length=394, Percent_Identity=25.1269035532995, Blast_Score=86, Evalue=7e-17, Organism=Drosophila melanogaster, GI20130357, Length=496, Percent_Identity=23.1854838709677, Blast_Score=84, Evalue=4e-16, Organism=Drosophila melanogaster, GI281365686, Length=347, Percent_Identity=23.9193083573487, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356441, Length=528, Percent_Identity=23.2954545454545, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI28573631, Length=560, Percent_Identity=21.6071428571429, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI20130353, Length=560, Percent_Identity=21.4285714285714, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24648257, Length=351, Percent_Identity=24.2165242165242, Blast_Score=79, Evalue=9e-15, Organism=Drosophila melanogaster, GI21358303, Length=249, Percent_Identity=24.4979919678715, Blast_Score=76, Evalue=5e-14, Organism=Drosophila melanogaster, GI24653035, Length=293, Percent_Identity=23.5494880546075, Blast_Score=73, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR011963 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: 6.3.2.-
Molecular weight: Translated: 59018; Mature: 58886
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPALPGCPTWPEAYAARYREAGYWRSETFGQLLHERAQRHGERTALVAGERRLTYANL CCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECH DARVSQLAAGFHALGIQARDRVVVQLPNVAEFFEVIFALFRLGALPVFALPAHRASEIGY HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH FCAFTEAVAYVIADKQAGFDYRTLAEQVRGTCPTLKHVIVAGDAGPFTALSSLYAAPTAL HHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCC PPGPAPSDVAFFQLSGGSTGVPKLIPRTHDDYIYSLRGSVDICQLDETSVYLCALPAAHN CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCC FPLSSPGVLGTFYAGGTAVLAPNSSPDTVFPIIERERVTITAVVPPLAMVWMDAAKTRRH CCCCCCCCEEEEECCCEEEECCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH QLASLRVLQVGGARLSTEAAMRVKPTLGCTLQQVFGMAEGLVNYTRLDDPEDVIVSTQGR HHHHEEEEEECCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC PISPDDEIRVVDEDGEDVAPGETGQLLTRGPYTIRGYYKAEAHNAKAFTDDGFYHTGDVV CCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCEECCCCCEECCCEE RVTPQGYLVVEGRAKDQINRGGDKVAAEEVENHLLAHPDVHDAAVVAVPDAFLGERTCAF EECCCCEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCEEEE VIARGTPPAPNVLTAFLRQRGLAAFKIPDRVEFVEAFPKTGVGKVSKKALRDVLAGAPSP EEECCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC TPVSRATR CCCCCCCC >Mature Secondary Structure TSPALPGCPTWPEAYAARYREAGYWRSETFGQLLHERAQRHGERTALVAGERRLTYANL CCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECH DARVSQLAAGFHALGIQARDRVVVQLPNVAEFFEVIFALFRLGALPVFALPAHRASEIGY HHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHH FCAFTEAVAYVIADKQAGFDYRTLAEQVRGTCPTLKHVIVAGDAGPFTALSSLYAAPTAL HHHHHHHHHHHEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCC PPGPAPSDVAFFQLSGGSTGVPKLIPRTHDDYIYSLRGSVDICQLDETSVYLCALPAAHN CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCC FPLSSPGVLGTFYAGGTAVLAPNSSPDTVFPIIERERVTITAVVPPLAMVWMDAAKTRRH CCCCCCCCEEEEECCCEEEECCCCCCCCEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH QLASLRVLQVGGARLSTEAAMRVKPTLGCTLQQVFGMAEGLVNYTRLDDPEDVIVSTQGR HHHHEEEEEECCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCC PISPDDEIRVVDEDGEDVAPGETGQLLTRGPYTIRGYYKAEAHNAKAFTDDGFYHTGDVV CCCCCCCEEEECCCCCCCCCCCCCCEEECCCEEEEEEEEECCCCCCEECCCCCEECCCEE RVTPQGYLVVEGRAKDQINRGGDKVAAEEVENHLLAHPDVHDAAVVAVPDAFLGERTCAF EECCCCEEEEECCCHHHHHCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCHHHCCCEEEE VIARGTPPAPNVLTAFLRQRGLAAFKIPDRVEFVEAFPKTGVGKVSKKALRDVLAGAPSP EEECCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC TPVSRATR CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8921902; 9384377; 8224884; 12221282 [H]