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The map label for this gene is yfdH [C]

Identifier: 108762457

GI number: 108762457

Start: 5914461

End: 5915165

Strand: Direct

Name: yfdH [C]

Synonym: MXAN_4719

Alternate gene names: 108762457

Gene position: 5914461-5915165 (Clockwise)

Preceding gene: 108761680

Following gene: 108757197

Centisome position: 64.71

GC content: 65.96

Gene sequence:

>705_bases
ATGAACCCAGCCCTGGTCTGCATCCCCACGTACAACGAGCGGGAAAACATCGAGGCCATCGTCCAGGCGGTGCTGGAGAC
CGACCCCCGGGTCGACATCCTCATCGTGGACGACAATTCGCCCGATGGCACAGGGCAACTCGCGGATGGGCTCGCCGCAC
AGGATTCGCGCGTGCGCGTCCTCCACCGCGAGAAGAAGGAGGGCCTGGGCCGCGCCTACCTCGCCGCGTTCCGTTGGGCC
CTGGCCGAGCAGTACACGTACATCCTGGAGATGGACGCCGACTTCAGCCACGACCCGCGCTACCTGCCCGGCATCCTGGA
TGCGGCCGAGGCTGGCGCGGACCTGGTGCTCGGCTCGCGCTACGTCACGGGCGGCGGCACGGTGAACTGGGGCGTGGGGC
GGCAGCTCATCAGCCGCGGTGGCAGCCTCTACGCACGGTCGATTCTGGGCGTGGGCATCCAGGACCTCACCGGCGGCTTC
AAGTGCTTCCACCGCCGGGTGCTGGAGGCCATCGACCTGGATTCGGTGAAGAGCACCGGTTACGCGTTTCAAATCGAGCT
GACCTACCGCACGCTGCGCAAAGGCTTCACCGTGCGCGAAGTGCCCATCGTCTTCGAGGACCGGCGCGTGGGTCACTCCA
AGATGAGCAAGAAAATCTTCGCCGAGGCTCTCACCATGGTGTGGAAGCTGCGGCTCACGGTGTAA

Upstream 100 bases:

>100_bases
TGCGCGGCCGGCTGGGCGAGACGGGCGCGGCCACCCGGGCGGCGGAGTCCGTACTGGAGCTGCTGCCCCCGGGCCGCGTT
TAGGGTATGTCGGCCGGGTC

Downstream 100 bases:

>100_bases
GCCCAGGCTGTCATGCCGGAATACGCGTCGCTGTTCCTCGTCTCGCTGTCGGCCATCTTCTTCGTGGTGGACCCCATTGG
CGTCGTCCCGCTGTTCCTGG

Product: group 2 family glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MNPALVCIPTYNERENIEAIVQAVLETDPRVDILIVDDNSPDGTGQLADGLAAQDSRVRVLHREKKEGLGRAYLAAFRWA
LAEQYTYILEMDADFSHDPRYLPGILDAAEAGADLVLGSRYVTGGGTVNWGVGRQLISRGGSLYARSILGVGIQDLTGGF
KCFHRRVLEAIDLDSVKSTGYAFQIELTYRTLRKGFTVREVPIVFEDRRVGHSKMSKKIFAEALTMVWKLRLTV

Sequences:

>Translated_234_residues
MNPALVCIPTYNERENIEAIVQAVLETDPRVDILIVDDNSPDGTGQLADGLAAQDSRVRVLHREKKEGLGRAYLAAFRWA
LAEQYTYILEMDADFSHDPRYLPGILDAAEAGADLVLGSRYVTGGGTVNWGVGRQLISRGGSLYARSILGVGIQDLTGGF
KCFHRRVLEAIDLDSVKSTGYAFQIELTYRTLRKGFTVREVPIVFEDRRVGHSKMSKKIFAEALTMVWKLRLTV
>Mature_234_residues
MNPALVCIPTYNERENIEAIVQAVLETDPRVDILIVDDNSPDGTGQLADGLAAQDSRVRVLHREKKEGLGRAYLAAFRWA
LAEQYTYILEMDADFSHDPRYLPGILDAAEAGADLVLGSRYVTGGGTVNWGVGRQLISRGGSLYARSILGVGIQDLTGGF
KCFHRRVLEAIDLDSVKSTGYAFQIELTYRTLRKGFTVREVPIVFEDRRVGHSKMSKKIFAEALTMVWKLRLTV

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=221, Percent_Identity=39.8190045248869, Blast_Score=153, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI71999402, Length=218, Percent_Identity=37.1559633027523, Blast_Score=147, Evalue=7e-36,
Organism=Saccharomyces cerevisiae, GI6325441, Length=234, Percent_Identity=29.4871794871795, Blast_Score=99, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24585265, Length=217, Percent_Identity=35.0230414746544, Blast_Score=138, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 25992; Mature: 25992

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPALVCIPTYNERENIEAIVQAVLETDPRVDILIVDDNSPDGTGQLADGLAAQDSRVRV
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCHHHH
LHREKKEGLGRAYLAAFRWALAEQYTYILEMDADFSHDPRYLPGILDAAEAGADLVLGSR
HHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEECCE
YVTGGGTVNWGVGRQLISRGGSLYARSILGVGIQDLTGGFKCFHRRVLEAIDLDSVKSTG
EEECCCEEEHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YAFQIELTYRTLRKGFTVREVPIVFEDRRVGHSKMSKKIFAEALTMVWKLRLTV
EEEEEEEEHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHEECC
>Mature Secondary Structure
MNPALVCIPTYNERENIEAIVQAVLETDPRVDILIVDDNSPDGTGQLADGLAAQDSRVRV
CCCCEEEEECCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCHHHH
LHREKKEGLGRAYLAAFRWALAEQYTYILEMDADFSHDPRYLPGILDAAEAGADLVLGSR
HHHHHHHCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHCCCCEEECCE
YVTGGGTVNWGVGRQLISRGGSLYARSILGVGIQDLTGGFKCFHRRVLEAIDLDSVKSTG
EEECCCEEEHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
YAFQIELTYRTLRKGFTVREVPIVFEDRRVGHSKMSKKIFAEALTMVWKLRLTV
EEEEEEEEHHHHHCCCCEEECCEEEECCCCCHHHHHHHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]