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The map label for this gene is ychE [H]

Identifier: 108757197

GI number: 108757197

Start: 5915178

End: 5915804

Strand: Direct

Name: ychE [H]

Synonym: MXAN_4720

Alternate gene names: 108757197

Gene position: 5915178-5915804 (Clockwise)

Preceding gene: 108762457

Following gene: 108759158

Centisome position: 64.72

GC content: 67.94

Gene sequence:

>627_bases
ATGCCGGAATACGCGTCGCTGTTCCTCGTCTCGCTGTCGGCCATCTTCTTCGTGGTGGACCCCATTGGCGTCGTCCCGCT
GTTCCTGGCGATGACGGCCGGGGACTCGCAGGAGAAGGTGCGCCGCACTGCCATGCGCGCCTGCCTGGTGGCCTGCGGGA
TGATGCTGTTCTTCGCCCTCTTCGGCGGCGTCATCTTCAAGGTGTTCGGCGTGTCGCTGGGCGCCTTCCGGGTGGCCGGT
GGCATCCTGCTGCTCATCACCGCGTTGGACATGCTTCGCGCCCGCCCGGCGGAGACGCGCACCACGCCGTCCGAGGAACA
GGAAGGCGTGGTGAAGGAGGACGTGGCCATCGTCCCCCTCGCCATTCCACTGCTGGCGGGCCCGGGCGCCATCGCCACCG
CCATGGTGCTGATGGCCAAGGGCGACACGCTCGTCTCCGCCATCCCCGTGCTGGCCGCCGTCGTGCTGACGTTCGTGGCC
AGCTACTTCATCCTCCGCGCCTCCGGGCTCATCCAGCGCGTGCTGCGCCAATCCGGCGTGGCCATCGTCGAGCGGGTGAT
GGGACTCATCCTGGCCGCCATCGCGGTGCAGTTCATCGCGGACGGTGGCAAGGAGCTGTTCAAGTAG

Upstream 100 bases:

>100_bases
GGACCGGCGCGTGGGTCACTCCAAGATGAGCAAGAAAATCTTCGCCGAGGCTCTCACCATGGTGTGGAAGCTGCGGCTCA
CGGTGTAAGCCCAGGCTGTC

Downstream 100 bases:

>100_bases
GTCCGGGGATGGCCACCCACTCTGGGCCCTTGCGCTTCAGCAGGCCCTGCGGCTTGCCCTCCAGTGACAGCTCGTCGTGG
CTGGCGCGGTGCGCGTCGTA

Product: MarC membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MPEYASLFLVSLSAIFFVVDPIGVVPLFLAMTAGDSQEKVRRTAMRACLVACGMMLFFALFGGVIFKVFGVSLGAFRVAG
GILLLITALDMLRARPAETRTTPSEEQEGVVKEDVAIVPLAIPLLAGPGAIATAMVLMAKGDTLVSAIPVLAAVVLTFVA
SYFILRASGLIQRVLRQSGVAIVERVMGLILAAIAVQFIADGGKELFK

Sequences:

>Translated_208_residues
MPEYASLFLVSLSAIFFVVDPIGVVPLFLAMTAGDSQEKVRRTAMRACLVACGMMLFFALFGGVIFKVFGVSLGAFRVAG
GILLLITALDMLRARPAETRTTPSEEQEGVVKEDVAIVPLAIPLLAGPGAIATAMVLMAKGDTLVSAIPVLAAVVLTFVA
SYFILRASGLIQRVLRQSGVAIVERVMGLILAAIAVQFIADGGKELFK
>Mature_207_residues
PEYASLFLVSLSAIFFVVDPIGVVPLFLAMTAGDSQEKVRRTAMRACLVACGMMLFFALFGGVIFKVFGVSLGAFRVAGG
ILLLITALDMLRARPAETRTTPSEEQEGVVKEDVAIVPLAIPLLAGPGAIATAMVLMAKGDTLVSAIPVLAAVVLTFVAS
YFILRASGLIQRVLRQSGVAIVERVMGLILAAIAVQFIADGGKELFK

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=207, Percent_Identity=33.3333333333333, Blast_Score=136, Evalue=1e-33,
Organism=Escherichia coli, GI1787809, Length=201, Percent_Identity=30.3482587064677, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789842, Length=195, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 21917; Mature: 21786

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEYASLFLVSLSAIFFVVDPIGVVPLFLAMTAGDSQEKVRRTAMRACLVACGMMLFFAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FGGVIFKVFGVSLGAFRVAGGILLLITALDMLRARPAETRTTPSEEQEGVVKEDVAIVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHH
AIPLLAGPGAIATAMVLMAKGDTLVSAIPVLAAVVLTFVASYFILRASGLIQRVLRQSGV
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AIVERVMGLILAAIAVQFIADGGKELFK
HHHHHHHHHHHHHHHHHHHHCCHHHHCC
>Mature Secondary Structure 
PEYASLFLVSLSAIFFVVDPIGVVPLFLAMTAGDSQEKVRRTAMRACLVACGMMLFFAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FGGVIFKVFGVSLGAFRVAGGILLLITALDMLRARPAETRTTPSEEQEGVVKEDVAIVPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHH
AIPLLAGPGAIATAMVLMAKGDTLVSAIPVLAAVVLTFVASYFILRASGLIQRVLRQSGV
HHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
AIVERVMGLILAAIAVQFIADGGKELFK
HHHHHHHHHHHHHHHHHHHHCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2015910; 9097039; 9278503 [H]