Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

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The map label for this gene is 108761536

Identifier: 108761536

GI number: 108761536

Start: 5695600

End: 5696817

Strand: Direct

Name: 108761536

Synonym: MXAN_4563

Alternate gene names: NA

Gene position: 5695600-5696817 (Clockwise)

Preceding gene: 108761122

Following gene: 108760073

Centisome position: 62.32

GC content: 71.02

Gene sequence:

>1218_bases
ATGCCAATGTCATGGCCTGCTTGGAGCCCCGCGTCATTCACCCGGGTCCGCCGCGCCTCCCCCCTTCGCCGGGCGCGGTG
CGGGTGCGCCCGTTACAGTCGGATGTCCATGCGGCCCCACTTCCACGTGGCCGGCTTTCCCGTCCGGCTCCATCCGCTCT
TCTTCGTCGTCGCATTGATGACGGGCTGGACGCTCATCTCCGAGCCCGCGCGGCTCGCGTTGTGGGTGGGCATCGTCTTC
GTGTCGGTGCTGCTCCATGAACTGGGGCATGCGCTGGCCTTCCGCCGCTACGGCTGTCCCGCTCGAATCGAGCTGCACGG
AATGGGCGGCACCACCCAGACCCACGACGCCGCGCACCTCACTCACCAGCAGTCGGCCTTCGTGAGCTTCGCCGGGCCGG
GCATCGGCTTCCTGGCGGGAGGGCTCATCTGGGGTCTGTCGCAGCTCGTTCCCCTGGGTGAGCCGGGCGGACTGGCGGAC
CAGGGCGTGCGGCAGTTCCTGTGGGTCAACATCGGCTGGGGGCTCTTCAACCTGCTGCCCATGCAGCCGCTGGACGGTGG
ACATCTGCTGGCGGACCTGGTGCGCGCCCGCAGCGGCTACCGCCACGAACGGGGGGTGCTCGGCGTGGGCATCGCCACGG
CGGTGGTGGTGCTGGGGCTGGCCATCTGGTCGAAGCAGCTGTGGATGGGGATGCTGGCGATGGTGCTGGGGGTGATGAAC
CTCGAGCAGCTCCGCCGCACGCCGAAGCGGCGCCCCGCCGAGCGGCGGTTCGCCCTCCCCCGCCTGGTCCGCAAGCCCGA
GGCGGCACCGGCGGGCGCCATCTCCATCGAGCAGTTGATGGACGAGCTGCGCGGAACGCCCCGCCCCCCAGGCGCGGCCG
ATGCAGATGATGACCTGGAGGGCCCTCATGATCCGGCCCTGGTGGGCGAGATGCTCCTGGACAACGGGCTGCCGGAGCTG
GCCGTGGGCTCGCTCCAATCCGCCTTCACGCAGGCGCCCCTGGCGCGCACCGGCCATGCCCTGGTGCTGGCGCTGCTGCA
CACCGGGCGGCTCCAGGAACTGGCCTCGCTGCTGGACAGCTCGCACGCCCGGCAGCTGTCCGAGGACACGCTGGCCCTCA
TCTCCGAACACGCCGGGACGGCCAGTGAGGCCCCACTCACCGAGCGGATTACCGCGCTGCGGCACGGGCGGACTCCTGCC
ACGGATGAGCCCCGCTGA

Upstream 100 bases:

>100_bases
CGAGACTCTATCTCACTTCTCGTGCTTCGCGAGGCCCTGTCCCCACATCCACGCCGCGCCGGGGAAGACGCCACGGCCGG
CATGTCACTGAAGCCATGTC

Downstream 100 bases:

>100_bases
TTGCCGCGCCGCGCCAGAAGGTGCTCTCCGCCTGACGTCCGGCAGGCGGCCCATCAACTGCCTTGAGCGGGAGGCACGTA
TCCGGGTTATAGGGGCGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: Site-2-type intermembrane protease [H]

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALMTGWTLISEPARLALWVGIVF
VSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHLTHQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLAD
QGVRQFLWVNIGWGLFNLLPMQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN
LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLEGPHDPALVGEMLLDNGLPEL
AVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDSSHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPA
TDEPR

Sequences:

>Translated_405_residues
MPMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALMTGWTLISEPARLALWVGIVF
VSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHLTHQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLAD
QGVRQFLWVNIGWGLFNLLPMQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN
LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLEGPHDPALVGEMLLDNGLPEL
AVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDSSHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPA
TDEPR
>Mature_404_residues
PMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALMTGWTLISEPARLALWVGIVFV
SVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHLTHQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLADQ
GVRQFLWVNIGWGLFNLLPMQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMNL
EQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLEGPHDPALVGEMLLDNGLPELA
VGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDSSHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPAT
DEPR

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 43943; Mature: 43811

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALM
CCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH
TGWTLISEPARLALWVGIVFVSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHL
HCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
THQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLADQGVRQFLWVNIGWGLFNLLP
HHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCC
MQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN
CCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLE
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GPHDPALVGEMLLDNGLPELAVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
SHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPATDEPR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PMSWPAWSPASFTRVRRASPLRRARCGCARYSRMSMRPHFHVAGFPVRLHPLFFVVALM
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH
TGWTLISEPARLALWVGIVFVSVLLHELGHALAFRRYGCPARIELHGMGGTTQTHDAAHL
HCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHH
THQQSAFVSFAGPGIGFLAGGLIWGLSQLVPLGEPGGLADQGVRQFLWVNIGWGLFNLLP
HHHHHHHEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHCC
MQPLDGGHLLADLVRARSGYRHERGVLGVGIATAVVVLGLAIWSKQLWMGMLAMVLGVMN
CCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LEQLRRTPKRRPAERRFALPRLVRKPEAAPAGAISIEQLMDELRGTPRPPGAADADDDLE
HHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GPHDPALVGEMLLDNGLPELAVGSLQSAFTQAPLARTGHALVLALLHTGRLQELASLLDS
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHH
SHARQLSEDTLALISEHAGTASEAPLTERITALRHGRTPATDEPR
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]