Definition Myxococcus xanthus DK 1622 chromosome, complete genome.
Accession NC_008095
Length 9,139,763

Click here to switch to the map view.

The map label for this gene is pheT [H]

Identifier: 108761050

GI number: 108761050

Start: 4190160

End: 4192607

Strand: Direct

Name: pheT [H]

Synonym: MXAN_3595

Alternate gene names: 108761050

Gene position: 4190160-4192607 (Clockwise)

Preceding gene: 108763246

Following gene: 108759809

Centisome position: 45.85

GC content: 70.75

Gene sequence:

>2448_bases
GTGTTCCAGCCGATTGATGAAGAGGGTGGACCTGTGAAGATTTCGGTGAAGTGGCTGGGCGATTACGTGGCGCTGCCGCC
GTCCGAGGACGAGCTGGCGCGCAAGCTGACCGCCGCGGGCCTGGAGATTGAGGGAATGGAGCGCCCCGCGGAAGCCCTTC
GCGGCGTGGTGGTGGCGCAAATCAAGGAGTCCGTGCAGCACCCCAACGCGGACAAGCTGTCCGTCACGCAGGTGGACATC
GGCGGGACGGCGCTGCTCCAGGTGGTGTGCGGCGCGAAGAACTTCAAGGTGGGCGACAAGGTGCCGCTGGCCACCGTGGG
CGCGAAGCTGCCCAACGGCATGGACATCAAGCAGGCGGCGCTGCGCGGCGTGGACAGCTTCGGCATGCTCTGCTCGTCCA
AGGAGCTGGGCCTGAGCGAGGAGTCCAGCGGCCTGCTCATCCTTCCGGCGGACACGCGCGTGGGCACGCCCATCGCGGAG
GCCGTGGGGCTGGATGGCGTGGTGCTGGAGGTGAACGTCACGCCGAACCGCCCGGACGCGCTCAGCCACCTGGGCGTGGC
GCGCGAGGTGAGCGTGGTGACGGGCTCCGCGTTGAAGGTGCCCCAGCCGAAGCCCGCGGAGTCGGGCACGCCCGCCGCCG
AGCAGGTGAAGGTGCGCGTGGAGGCCCCGGACCGCTGCCCGCGCTACGTGGCGCGCGTGGTGGAGAACGTGAAGATTGGC
CCGTCTCCGCAGTGGATGCAGGACCGGCTGAAGGCGGCCGGGGTGCGCGCCATCAACAACGTGGTGGATGTCACCAACTA
CGTGAACCTGGAGTACGGGCAGCCGCTGCACGCCTTCGACCTGGAGAAGCTGGCCGGTCAGGAGATTGTCGTCCGTACGG
CGACGCGCGGCGAGAAGCTCAAGACGCTGGACGGCAAGGACCGCGTCCTGGACGTGGATGACCTGGTCATCGCGGACAAG
GACCGGGCGCAGGCCATCGCTGGCGTCATGGGCGGCGGCGACAGCGAGGTGACCGAGGGCACCCGGCGGCTGGTGCTGGA
GTCGGCGAACTTCCAGGGTTCCACGGTGCGGCGTTCGTCGAAGCGGCACGGGCTGCACACGGAGGCATCGCACCGCTTCG
AGCGCGGGGCGGACATGGACGCCGTGGTGCCGGCCATTGACCGGGCGGCACAGCTCATCGCGGAGCTGGCGGGGGGCACG
GTGGCTCCTGGCCGCGTGGACGTGTACCCGGCGCCGAAGCCGCCTCGGAAGGTGACGCTGCGCTTCGCCCGGGTGGAGCA
GGTGCTGGGCGTGGCCGTGGCGGAGAAGGAGGTCCGCCGCATCCTGGAGGCGCTGGGCTTCAAGGCGGTGGAGGAGGGGA
CGGGGCAGGCGACGTACGAGGTGCCTCGGGCCCGTGTCGACGTGGAGCGCGAGGAGGACCTGTTGGAGGAGGTCGCGCGC
ATCTACGGCTACGACAACATTCCGGCGACGCTCCCGCGGGGACTGGCCACGCTGGCCCCGGAGCCCGCGAATGCCGAGGC
CGAGCGCCGCATGCGTCAGGCGCTGGCCGGGGCGGGCTTCGACGAGGTGGTGAACTACTCGTTCGTCGCGCCGCGCAGCC
TGGAGGTGCTGGGTGGGGCGGAGAAGCCGGTGGCGCTGCTCAATCCATTGAGCACCGAGCAGTCGGTGATGCGCACCAGC
CTGCTGCCGGGCCTGCTGGAGAACCTGTCCCGCAGCGTGCGGCACCAGGTGGAGGCGGTGGCCATCTACGAGACGGGCCG
GGCCTACTTCCAGGACGCGGAAGGCGGGCAGGGGCAGCGTCCGGCGGCGCGCGAGGTGCCTCGCGTGGCGGGTCTGGTGT
GGGGCCTGCGCGGTGGTGGCCGGAGCTGGACGCACAAGGATGCCCGCGCGGACTTCTACGACGCGAAGGCGGCGGTGGAG
GGGCTACTGGGCGCACTCCGCGTGGAGGGCGTGACGTACGTGCCCGCGGGGCCAGCGGCGTACCACCCGAAGGCCGTGGC
GCAGGTGAAGGCGGCGGACGGCACGGTGCTGGGCCACGTGGGCGAGGTGCACCCCCGGGTGGCGAAGGCGCTGGGCCTGC
CGGACGGGGTGTTCGTCTTCGAGTTGGACACGGAGCCGCTGTACGCGGCCTCGAAGCTGGTGCCGGCGTACCGGTCGCTG
CCGCGTTTCCCGGCGGTGCTGCGGGACCTGGCGGTGGTGGTGCCGCTGGAGTTGCCCAACGACGAGGTGCGTCGGGTGAT
CCTGGAGGTGGGCAAGCCGCTGGTGGAGGACGCTCAGGTGTTCGACGTGTACACCGGTGAGCAGATTCCCCAGGGTCGGA
AGAACTTGGCGTACGCGCTGCGCTACCGCTCGGCCGAGCGGACGCTGACCGATGTGGAGGTCAACGAGGCGCATCAGCGC
ATCGTGGATGAGGTGAAGCAGCGGCTGGGGGCTGCCTTGCGCGCCTGA

Upstream 100 bases:

>100_bases
ATGCTGCGCTACCGCATCGACGACCTGCGGATGATGTTCGAGAACGACGCGCGGTTCCTCGAGCAGTTCTGAGATTCCAG
GGGGCCGCTGGTGGGCCCCC

Downstream 100 bases:

>100_bases
ATTCCTGAATGAAGTCAGAGGGTTGACACGTCTTTGGGAAGGCTGCAACAGTGCCCGGCGTTCAGCCCCGAGGGCTTCCC
GAGGATTCGCATGACGAAGG

Product: phenylalanyl-tRNA synthetase subunit beta

Products: NA

Alternate protein names: Phenylalanine--tRNA ligase beta chain; PheRS [H]

Number of amino acids: Translated: 815; Mature: 815

Protein sequence:

>815_residues
MFQPIDEEGGPVKISVKWLGDYVALPPSEDELARKLTAAGLEIEGMERPAEALRGVVVAQIKESVQHPNADKLSVTQVDI
GGTALLQVVCGAKNFKVGDKVPLATVGAKLPNGMDIKQAALRGVDSFGMLCSSKELGLSEESSGLLILPADTRVGTPIAE
AVGLDGVVLEVNVTPNRPDALSHLGVAREVSVVTGSALKVPQPKPAESGTPAAEQVKVRVEAPDRCPRYVARVVENVKIG
PSPQWMQDRLKAAGVRAINNVVDVTNYVNLEYGQPLHAFDLEKLAGQEIVVRTATRGEKLKTLDGKDRVLDVDDLVIADK
DRAQAIAGVMGGGDSEVTEGTRRLVLESANFQGSTVRRSSKRHGLHTEASHRFERGADMDAVVPAIDRAAQLIAELAGGT
VAPGRVDVYPAPKPPRKVTLRFARVEQVLGVAVAEKEVRRILEALGFKAVEEGTGQATYEVPRARVDVEREEDLLEEVAR
IYGYDNIPATLPRGLATLAPEPANAEAERRMRQALAGAGFDEVVNYSFVAPRSLEVLGGAEKPVALLNPLSTEQSVMRTS
LLPGLLENLSRSVRHQVEAVAIYETGRAYFQDAEGGQGQRPAAREVPRVAGLVWGLRGGGRSWTHKDARADFYDAKAAVE
GLLGALRVEGVTYVPAGPAAYHPKAVAQVKAADGTVLGHVGEVHPRVAKALGLPDGVFVFELDTEPLYAASKLVPAYRSL
PRFPAVLRDLAVVVPLELPNDEVRRVILEVGKPLVEDAQVFDVYTGEQIPQGRKNLAYALRYRSAERTLTDVEVNEAHQR
IVDEVKQRLGAALRA

Sequences:

>Translated_815_residues
MFQPIDEEGGPVKISVKWLGDYVALPPSEDELARKLTAAGLEIEGMERPAEALRGVVVAQIKESVQHPNADKLSVTQVDI
GGTALLQVVCGAKNFKVGDKVPLATVGAKLPNGMDIKQAALRGVDSFGMLCSSKELGLSEESSGLLILPADTRVGTPIAE
AVGLDGVVLEVNVTPNRPDALSHLGVAREVSVVTGSALKVPQPKPAESGTPAAEQVKVRVEAPDRCPRYVARVVENVKIG
PSPQWMQDRLKAAGVRAINNVVDVTNYVNLEYGQPLHAFDLEKLAGQEIVVRTATRGEKLKTLDGKDRVLDVDDLVIADK
DRAQAIAGVMGGGDSEVTEGTRRLVLESANFQGSTVRRSSKRHGLHTEASHRFERGADMDAVVPAIDRAAQLIAELAGGT
VAPGRVDVYPAPKPPRKVTLRFARVEQVLGVAVAEKEVRRILEALGFKAVEEGTGQATYEVPRARVDVEREEDLLEEVAR
IYGYDNIPATLPRGLATLAPEPANAEAERRMRQALAGAGFDEVVNYSFVAPRSLEVLGGAEKPVALLNPLSTEQSVMRTS
LLPGLLENLSRSVRHQVEAVAIYETGRAYFQDAEGGQGQRPAAREVPRVAGLVWGLRGGGRSWTHKDARADFYDAKAAVE
GLLGALRVEGVTYVPAGPAAYHPKAVAQVKAADGTVLGHVGEVHPRVAKALGLPDGVFVFELDTEPLYAASKLVPAYRSL
PRFPAVLRDLAVVVPLELPNDEVRRVILEVGKPLVEDAQVFDVYTGEQIPQGRKNLAYALRYRSAERTLTDVEVNEAHQR
IVDEVKQRLGAALRA
>Mature_815_residues
MFQPIDEEGGPVKISVKWLGDYVALPPSEDELARKLTAAGLEIEGMERPAEALRGVVVAQIKESVQHPNADKLSVTQVDI
GGTALLQVVCGAKNFKVGDKVPLATVGAKLPNGMDIKQAALRGVDSFGMLCSSKELGLSEESSGLLILPADTRVGTPIAE
AVGLDGVVLEVNVTPNRPDALSHLGVAREVSVVTGSALKVPQPKPAESGTPAAEQVKVRVEAPDRCPRYVARVVENVKIG
PSPQWMQDRLKAAGVRAINNVVDVTNYVNLEYGQPLHAFDLEKLAGQEIVVRTATRGEKLKTLDGKDRVLDVDDLVIADK
DRAQAIAGVMGGGDSEVTEGTRRLVLESANFQGSTVRRSSKRHGLHTEASHRFERGADMDAVVPAIDRAAQLIAELAGGT
VAPGRVDVYPAPKPPRKVTLRFARVEQVLGVAVAEKEVRRILEALGFKAVEEGTGQATYEVPRARVDVEREEDLLEEVAR
IYGYDNIPATLPRGLATLAPEPANAEAERRMRQALAGAGFDEVVNYSFVAPRSLEVLGGAEKPVALLNPLSTEQSVMRTS
LLPGLLENLSRSVRHQVEAVAIYETGRAYFQDAEGGQGQRPAAREVPRVAGLVWGLRGGGRSWTHKDARADFYDAKAAVE
GLLGALRVEGVTYVPAGPAAYHPKAVAQVKAADGTVLGHVGEVHPRVAKALGLPDGVFVFELDTEPLYAASKLVPAYRSL
PRFPAVLRDLAVVVPLELPNDEVRRVILEVGKPLVEDAQVFDVYTGEQIPQGRKNLAYALRYRSAERTLTDVEVNEAHQR
IVDEVKQRLGAALRA

Specific function: Unknown

COG id: COG0072

COG function: function code J; Phenylalanyl-tRNA synthetase beta subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 tRNA-binding domain [H]

Homologues:

Organism=Homo sapiens, GI124028525, Length=399, Percent_Identity=22.8070175438596, Blast_Score=78, Evalue=3e-14,
Organism=Escherichia coli, GI1788006, Length=807, Percent_Identity=39.1573729863693, Blast_Score=513, Evalue=1e-146,
Organism=Caenorhabditis elegans, GI17533403, Length=302, Percent_Identity=25.4966887417219, Blast_Score=86, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323089, Length=407, Percent_Identity=22.8501228501229, Blast_Score=74, Evalue=7e-14,

Paralogues:

None

Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005146
- InterPro:   IPR005147
- InterPro:   IPR009061
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004532
- InterPro:   IPR020825
- InterPro:   IPR005121
- InterPro:   IPR002547 [H]

Pfam domain/function: PF03483 B3_4; PF03484 B5; PF03147 FDX-ACB; PF01588 tRNA_bind [H]

EC number: =6.1.1.20 [H]

Molecular weight: Translated: 87580; Mature: 87580

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS50886 TRBD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFQPIDEEGGPVKISVKWLGDYVALPPSEDELARKLTAAGLEIEGMERPAEALRGVVVAQ
CCCCCCCCCCEEEEEEEEECCEEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH
IKESVQHPNADKLSVTQVDIGGTALLQVVCGAKNFKVGDKVPLATVGAKLPNGMDIKQAA
HHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHH
LRGVDSFGMLCSSKELGLSEESSGLLILPADTRVGTPIAEAVGLDGVVLEVNVTPNRPDA
HHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHH
LSHLGVAREVSVVTGSALKVPQPKPAESGTPAAEQVKVRVEAPDRCPRYVARVVENVKIG
HHHHCCHHEEEEEECCEEECCCCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHCCCCC
PSPQWMQDRLKAAGVRAINNVVDVTNYVNLEYGQPLHAFDLEKLAGQEIVVRTATRGEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCE
KTLDGKDRVLDVDDLVIADKDRAQAIAGVMGGGDSEVTEGTRRLVLESANFQGSTVRRSS
ECCCCCCCEEECCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCHHHHHH
KRHGLHTEASHRFERGADMDAVVPAIDRAAQLIAELAGGTVAPGRVDVYPAPKPPRKVTL
HHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH
RFARVEQVLGVAVAEKEVRRILEALGFKAVEEGTGQATYEVPRARVDVEREEDLLEEVAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHH
IYGYDNIPATLPRGLATLAPEPANAEAERRMRQALAGAGFDEVVNYSFVAPRSLEVLGGA
HHCCCCCCCHHCCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEECCCCHHHHCCC
EKPVALLNPLSTEQSVMRTSLLPGLLENLSRSVRHQVEAVAIYETGRAYFQDAEGGQGQR
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHEECCCCCCCCC
PAAREVPRVAGLVWGLRGGGRSWTHKDARADFYDAKAAVEGLLGALRVEGVTYVPAGPAA
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCC
YHPKAVAQVKAADGTVLGHVGEVHPRVAKALGLPDGVFVFELDTEPLYAASKLVPAYRSL
CCCHHHHEEECCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCC
PRFPAVLRDLAVVVPLELPNDEVRRVILEVGKPLVEDAQVFDVYTGEQIPQGRKNLAYAL
CCHHHHHHHCEEEEEEECCCHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHH
RYRSAERTLTDVEVNEAHQRIVDEVKQRLGAALRA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFQPIDEEGGPVKISVKWLGDYVALPPSEDELARKLTAAGLEIEGMERPAEALRGVVVAQ
CCCCCCCCCCEEEEEEEEECCEEECCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHH
IKESVQHPNADKLSVTQVDIGGTALLQVVCGAKNFKVGDKVPLATVGAKLPNGMDIKQAA
HHHHHCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCHHHHH
LRGVDSFGMLCSSKELGLSEESSGLLILPADTRVGTPIAEAVGLDGVVLEVNVTPNRPDA
HHCCHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCEEEEEEECCCCCHH
LSHLGVAREVSVVTGSALKVPQPKPAESGTPAAEQVKVRVEAPDRCPRYVARVVENVKIG
HHHHCCHHEEEEEECCEEECCCCCCCCCCCCCHHEEEEEECCCCCCHHHHHHHHHCCCCC
PSPQWMQDRLKAAGVRAINNVVDVTNYVNLEYGQPLHAFDLEKLAGQEIVVRTATRGEKL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCE
KTLDGKDRVLDVDDLVIADKDRAQAIAGVMGGGDSEVTEGTRRLVLESANFQGSTVRRSS
ECCCCCCCEEECCCEEEECCHHHHHHHHHHCCCCHHHHHHHHHHEEECCCCCCCHHHHHH
KRHGLHTEASHRFERGADMDAVVPAIDRAAQLIAELAGGTVAPGRVDVYPAPKPPRKVTL
HHCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHH
RFARVEQVLGVAVAEKEVRRILEALGFKAVEEGTGQATYEVPRARVDVEREEDLLEEVAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHCCCHHHHHHHHHHHH
IYGYDNIPATLPRGLATLAPEPANAEAERRMRQALAGAGFDEVVNYSFVAPRSLEVLGGA
HHCCCCCCCHHCCCHHHCCCCCCCCHHHHHHHHHHHCCCHHHHHCCEEECCCCHHHHCCC
EKPVALLNPLSTEQSVMRTSLLPGLLENLSRSVRHQVEAVAIYETGRAYFQDAEGGQGQR
CCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHEECCCCCCCCC
PAAREVPRVAGLVWGLRGGGRSWTHKDARADFYDAKAAVEGLLGALRVEGVTYVPAGPAA
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCC
YHPKAVAQVKAADGTVLGHVGEVHPRVAKALGLPDGVFVFELDTEPLYAASKLVPAYRSL
CCCHHHHEEECCCCEEEECCCHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCC
PRFPAVLRDLAVVVPLELPNDEVRRVILEVGKPLVEDAQVFDVYTGEQIPQGRKNLAYAL
CCHHHHHHHCEEEEEEECCCHHHHHHHHHHCCCHHCCCCEEEEECCCCCCCCHHHHHHHH
RYRSAERTLTDVEVNEAHQRIVDEVKQRLGAALRA
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA