Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
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Accession | NC_008095 |
Length | 9,139,763 |
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The map label for this gene is 108758385
Identifier: 108758385
GI number: 108758385
Start: 5794476
End: 5796827
Strand: Direct
Name: 108758385
Synonym: MXAN_4618
Alternate gene names: NA
Gene position: 5794476-5796827 (Clockwise)
Preceding gene: 108759634
Following gene: 108761799
Centisome position: 63.4
GC content: 66.79
Gene sequence:
>2352_bases ATGGCAGCGACATTCCGGAGTCCCCACAGCAATGCCCTGACGCACGAACACGCAGAGAAGCACTCACACTTCTCAGGTTT GCATTGCCCCCCCCTCCGTACGGTACTCACGCCATCAATGCAATCCCCTGAAGCACCGGTGCCAGTCCTTGACGTACGCC CCGACCCGCGGCGCTGGCCTCGCGCCGCGATGAGCATGTTGCTCGCGCTCAGTACCGCGGGGGTATTGACGATGGGGGCA TGGGTCCCCCTCTTCCAATCCCTGAGCTCCCGCGTCGTGCTGGTCCTGGGGTGCCTGGCTTTGGGAGTGGTGCTCTACCG CTTCCTACTTCCGTGGCTGCACAGTTGGCTGACGCGCTACTCGCCCGCTCAGCAGCGGACCTGGCTGGGGGTCGTCGCCC TGGTCACCATGCTCGTGATGGTAGCCACCCCGCTCCACGTCATGATGCCCGCGGAACGACTGCCCGTGACGGTCCGTGCC ACGGGCGAGCGGAACCCCAGTTCCCAGGGCAGCGAGGTGTGGGTTCTCGGATTGCTCGACGCCTACGGTAGCCCACTGCC TTCCGATGGCTGGCGTTCCGAAGGAAAGTGGGAACGCCGTGATGGAGGCGCCTGGCTTTCGCACCTCGACCAGCCGGCGC GCCTGCATTGGGAAGCAGGCGGTCACAAGCCCAGGGTCCTCCAATTGTTGGCGCACGGGCACTCCGGCATCGTGGAGTAC ACCGTGAACGGTCGAACCGAGCGGCTCGACCTCTATTCGCCGCCCGGGACGGACGCACGCCGAGACCTGGTCCTCCACCC TCCTCCCATCGCATTGACCTCCATTGCCGGGATTCGAATCACCGTCATGTTGGCGGCCCACGCACTGGTCCTCGGCACCC TCCTGCTCCTGATGGGGCTCTGGCTCACGGGCCGTCCGCCACCACCCCTCAAGCCCATGCCACGGCGCTGGGTGGGACTG CTGACGGCCATCCCCACCGTGGTGGTGGCTGGCATCTGGCTGCTGACTGTCTACCCGGGAATGCTGAGTCCAGACTCGAC ATCCCAATGGCGTGACGCCCTTTCCGGGTCCATGGATGATGCGCATCCACTGTTCCACACCGCTTCCATCCGATTCCTCC AGAAGCTCTGGGAATCACCCGCGGCGGTGGCGCTCGCACAGATTGCCGGCCTGGGGGTGCTCGTCGGCTGGGGCTGCGCG GCGCTCGCGAGGGCAGGTGTCTCCCGAGGCATCATCGCGCTCACCGCGACGGTGTTCGCGCTGGCGCCCGTGAACGGGAC GATGGCCGTCACCCTCTGGAAGGACGTCCCGTTCAGCCTCTGCATCCTGGCCCTGTGTATCTGGGTCTTCCGCTCCGCGA CCGACACCACCACGCGCTGGGACGTGCCGTTCTGGGTGAGCATGGTAGTGCTGGGAGCCATGGCCATGTTGTTCCGTCAC AACGGCCTGCCCGCGGTGGTCGGAACCTTCCTGGCACTGGGTCTCCTCCGGAGGGAGCGCTACAAAGCGGTGGCGCTCGC GCTCGTGGCCACGTTTGTCGTCGCCTCGGGGACCCGCTGGGTGCTGAGCCAGACGTACACCATCAAACCCTTTCCCAAGG GGATGACGCTGATCGGATTCCTGGGCGCCCATGTGGCGGCAGGAACGCACCTGGAGCCCGGCGAACGAGCCCTCCTCGAG GAGCTCCACCCGCTCGACGACAAGTGGAACTACCGCTGCTTCAGCAACGTGTTCACCATCTGGGACGGACGCTTCGACAT GAACGCGCTGACCCGGCACAACAAGGCGTTGCTTCCGCTCCTCGTCCGCCTGACACAACGAGACGCAGCGCCAGTGCTCT CACACGTGCTGTGCAGCAGTTCGGTGCTGTGGAAGCTCTCGCAAGGCTCGGACCACATCAATGGTCCTCCCATCTGGAGG GGGCCCCACGGGGAACTGGACACCCTCGAGCCCGGAGCGCGACACCTTCGGTCCGACTCACTCCTTCCAGTCCTGCGTGA GCCCCTTCTCCGGTGGACCGTCCGGACGCTTGAGCCAGACCTGGCCTGGCTGCTCTGGCGCCCGGCGCTGCCGCTCTACC TGCTGCTGCTCGCCTGCGCGGTGGCATGCATCCGCCACCGGACCTGGCGGCTTGCCGCCGTGGCGCTCCCCGTCGTCTTG CACACGGCGGCGCTCGCCGCGCTCATCCCGTCACCCGACGTGCGCTATCAGTACCCCGTGTTCCTCGTGGCCCTGATGTT CGTTCCCGCGTGGCTCGCGGGGATGCGACTGAATGCGGCGCCGGCGACCGAAGCGCCGCGGCGCGCGCCTTCCGTCTCGC AGGACGCGCCGACGCTCAGGTCAGCCGGCTGA
Upstream 100 bases:
>100_bases AAGCCACTGGCAAGGAACCACGTCACGGAATGCCGTGCCGCGAGCCGCGCGCCGAACTGGGAAATGACCACGAAGAAAAA GCCCACCACCACGGTAATGA
Downstream 100 bases:
>100_bases CCGTGCTCCGAATCGCGCGGTGAATGACGGGCATCCGCTTGAAGAGCGTGTTCGCGCGGTCCACGAGCACGTAACGAAGC GGAGGCGCATCCCCGGGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 783; Mature: 782
Protein sequence:
>783_residues MAATFRSPHSNALTHEHAEKHSHFSGLHCPPLRTVLTPSMQSPEAPVPVLDVRPDPRRWPRAAMSMLLALSTAGVLTMGA WVPLFQSLSSRVVLVLGCLALGVVLYRFLLPWLHSWLTRYSPAQQRTWLGVVALVTMLVMVATPLHVMMPAERLPVTVRA TGERNPSSQGSEVWVLGLLDAYGSPLPSDGWRSEGKWERRDGGAWLSHLDQPARLHWEAGGHKPRVLQLLAHGHSGIVEY TVNGRTERLDLYSPPGTDARRDLVLHPPPIALTSIAGIRITVMLAAHALVLGTLLLLMGLWLTGRPPPPLKPMPRRWVGL LTAIPTVVVAGIWLLTVYPGMLSPDSTSQWRDALSGSMDDAHPLFHTASIRFLQKLWESPAAVALAQIAGLGVLVGWGCA ALARAGVSRGIIALTATVFALAPVNGTMAVTLWKDVPFSLCILALCIWVFRSATDTTTRWDVPFWVSMVVLGAMAMLFRH NGLPAVVGTFLALGLLRRERYKAVALALVATFVVASGTRWVLSQTYTIKPFPKGMTLIGFLGAHVAAGTHLEPGERALLE ELHPLDDKWNYRCFSNVFTIWDGRFDMNALTRHNKALLPLLVRLTQRDAAPVLSHVLCSSSVLWKLSQGSDHINGPPIWR GPHGELDTLEPGARHLRSDSLLPVLREPLLRWTVRTLEPDLAWLLWRPALPLYLLLLACAVACIRHRTWRLAAVALPVVL HTAALAALIPSPDVRYQYPVFLVALMFVPAWLAGMRLNAAPATEAPRRAPSVSQDAPTLRSAG
Sequences:
>Translated_783_residues MAATFRSPHSNALTHEHAEKHSHFSGLHCPPLRTVLTPSMQSPEAPVPVLDVRPDPRRWPRAAMSMLLALSTAGVLTMGA WVPLFQSLSSRVVLVLGCLALGVVLYRFLLPWLHSWLTRYSPAQQRTWLGVVALVTMLVMVATPLHVMMPAERLPVTVRA TGERNPSSQGSEVWVLGLLDAYGSPLPSDGWRSEGKWERRDGGAWLSHLDQPARLHWEAGGHKPRVLQLLAHGHSGIVEY TVNGRTERLDLYSPPGTDARRDLVLHPPPIALTSIAGIRITVMLAAHALVLGTLLLLMGLWLTGRPPPPLKPMPRRWVGL LTAIPTVVVAGIWLLTVYPGMLSPDSTSQWRDALSGSMDDAHPLFHTASIRFLQKLWESPAAVALAQIAGLGVLVGWGCA ALARAGVSRGIIALTATVFALAPVNGTMAVTLWKDVPFSLCILALCIWVFRSATDTTTRWDVPFWVSMVVLGAMAMLFRH NGLPAVVGTFLALGLLRRERYKAVALALVATFVVASGTRWVLSQTYTIKPFPKGMTLIGFLGAHVAAGTHLEPGERALLE ELHPLDDKWNYRCFSNVFTIWDGRFDMNALTRHNKALLPLLVRLTQRDAAPVLSHVLCSSSVLWKLSQGSDHINGPPIWR GPHGELDTLEPGARHLRSDSLLPVLREPLLRWTVRTLEPDLAWLLWRPALPLYLLLLACAVACIRHRTWRLAAVALPVVL HTAALAALIPSPDVRYQYPVFLVALMFVPAWLAGMRLNAAPATEAPRRAPSVSQDAPTLRSAG >Mature_782_residues AATFRSPHSNALTHEHAEKHSHFSGLHCPPLRTVLTPSMQSPEAPVPVLDVRPDPRRWPRAAMSMLLALSTAGVLTMGAW VPLFQSLSSRVVLVLGCLALGVVLYRFLLPWLHSWLTRYSPAQQRTWLGVVALVTMLVMVATPLHVMMPAERLPVTVRAT GERNPSSQGSEVWVLGLLDAYGSPLPSDGWRSEGKWERRDGGAWLSHLDQPARLHWEAGGHKPRVLQLLAHGHSGIVEYT VNGRTERLDLYSPPGTDARRDLVLHPPPIALTSIAGIRITVMLAAHALVLGTLLLLMGLWLTGRPPPPLKPMPRRWVGLL TAIPTVVVAGIWLLTVYPGMLSPDSTSQWRDALSGSMDDAHPLFHTASIRFLQKLWESPAAVALAQIAGLGVLVGWGCAA LARAGVSRGIIALTATVFALAPVNGTMAVTLWKDVPFSLCILALCIWVFRSATDTTTRWDVPFWVSMVVLGAMAMLFRHN GLPAVVGTFLALGLLRRERYKAVALALVATFVVASGTRWVLSQTYTIKPFPKGMTLIGFLGAHVAAGTHLEPGERALLEE LHPLDDKWNYRCFSNVFTIWDGRFDMNALTRHNKALLPLLVRLTQRDAAPVLSHVLCSSSVLWKLSQGSDHINGPPIWRG PHGELDTLEPGARHLRSDSLLPVLREPLLRWTVRTLEPDLAWLLWRPALPLYLLLLACAVACIRHRTWRLAAVALPVVLH TAALAALIPSPDVRYQYPVFLVALMFVPAWLAGMRLNAAPATEAPRRAPSVSQDAPTLRSAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85831; Mature: 85700
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAATFRSPHSNALTHEHAEKHSHFSGLHCPPLRTVLTPSMQSPEAPVPVLDVRPDPRRWP CCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCCHHH RAAMSMLLALSTAGVLTMGAWVPLFQSLSSRVVLVLGCLALGVVLYRFLLPWLHSWLTRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPAQQRTWLGVVALVTMLVMVATPLHVMMPAERLPVTVRATGERNPSSQGSEVWVLGLLD CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCEEEEECCCCCCCCCCCCEEEEEEHH AYGSPLPSDGWRSEGKWERRDGGAWLSHLDQPARLHWEAGGHKPRVLQLLAHGHSGIVEY HCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEEE TVNGRTERLDLYSPPGTDARRDLVLHPPPIALTSIAGIRITVMLAAHALVLGTLLLLMGL EECCCEEEEEEECCCCCCCCCCEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH WLTGRPPPPLKPMPRRWVGLLTAIPTVVVAGIWLLTVYPGMLSPDSTSQWRDALSGSMDD HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC AHPLFHTASIRFLQKLWESPAAVALAQIAGLGVLVGWGCAALARAGVSRGIIALTATVFA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LAPVNGTMAVTLWKDVPFSLCILALCIWVFRSATDTTTRWDVPFWVSMVVLGAMAMLFRH HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC NGLPAVVGTFLALGLLRRERYKAVALALVATFVVASGTRWVLSQTYTIKPFPKGMTLIGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHH LGAHVAAGTHLEPGERALLEELHPLDDKWNYRCFSNVFTIWDGRFDMNALTRHNKALLPL HHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHCCHHHHHH LVRLTQRDAAPVLSHVLCSSSVLWKLSQGSDHINGPPIWRGPHGELDTLEPGARHLRSDS HHHHHHCCHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC LLPVLREPLLRWTVRTLEPDLAWLLWRPALPLYLLLLACAVACIRHRTWRLAAVALPVVL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTAALAALIPSPDVRYQYPVFLVALMFVPAWLAGMRLNAAPATEAPRRAPSVSQDAPTLR HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SAG CCC >Mature Secondary Structure AATFRSPHSNALTHEHAEKHSHFSGLHCPPLRTVLTPSMQSPEAPVPVLDVRPDPRRWP CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCCCCEEECCCCCCHHH RAAMSMLLALSTAGVLTMGAWVPLFQSLSSRVVLVLGCLALGVVLYRFLLPWLHSWLTRY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SPAQQRTWLGVVALVTMLVMVATPLHVMMPAERLPVTVRATGERNPSSQGSEVWVLGLLD CCHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHCCEEEEECCCCCCCCCCCCEEEEEEHH AYGSPLPSDGWRSEGKWERRDGGAWLSHLDQPARLHWEAGGHKPRVLQLLAHGHSGIVEY HCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCCCEEEE TVNGRTERLDLYSPPGTDARRDLVLHPPPIALTSIAGIRITVMLAAHALVLGTLLLLMGL EECCCEEEEEEECCCCCCCCCCEEECCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH WLTGRPPPPLKPMPRRWVGLLTAIPTVVVAGIWLLTVYPGMLSPDSTSQWRDALSGSMDD HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCC AHPLFHTASIRFLQKLWESPAAVALAQIAGLGVLVGWGCAALARAGVSRGIIALTATVFA CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH LAPVNGTMAVTLWKDVPFSLCILALCIWVFRSATDTTTRWDVPFWVSMVVLGAMAMLFRH HCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHC NGLPAVVGTFLALGLLRRERYKAVALALVATFVVASGTRWVLSQTYTIKPFPKGMTLIGF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCHHHHHH LGAHVAAGTHLEPGERALLEELHPLDDKWNYRCFSNVFTIWDGRFDMNALTRHNKALLPL HHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHCCHHHCCCCCCHHHHHHCCHHHHHH LVRLTQRDAAPVLSHVLCSSSVLWKLSQGSDHINGPPIWRGPHGELDTLEPGARHLRSDS HHHHHHCCHHHHHHHHHHCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC LLPVLREPLLRWTVRTLEPDLAWLLWRPALPLYLLLLACAVACIRHRTWRLAAVALPVVL CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HTAALAALIPSPDVRYQYPVFLVALMFVPAWLAGMRLNAAPATEAPRRAPSVSQDAPTLR HHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC SAG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA