| Definition | Myxococcus xanthus DK 1622 chromosome, complete genome. |
|---|---|
| Accession | NC_008095 |
| Length | 9,139,763 |
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The map label for this gene is dhbB [H]
Identifier: 108759754
GI number: 108759754
Start: 4346191
End: 4347090
Strand: Reverse
Name: dhbB [H]
Synonym: MXAN_3644
Alternate gene names: 108759754
Gene position: 4347090-4346191 (Counterclockwise)
Preceding gene: 108757791
Following gene: 108758102
Centisome position: 47.56
GC content: 68.67
Gene sequence:
>900_bases ATGGCGCTCCCCGCCATCGCTCCCTATCCCATGCCCGGCACCACCGACCTGCCGAAGAACAAGGTCTCCTGGACGCCGGA CCCGAGCCGCGCCGTACTGCTCATCCACGACATGCAGCGCTACTTCGTGGAGGCCTTCACGCAGGGCCAGTCGCCCGTGA CGGAGCTGGTCGCCAACATCCAGCGGCTGCGGCAGCACTGCACGGCGCTGGGCATCCCCGTCGTGTACTCGGCCCAACCG GGTGGCCAGACGCCCGAGCAGCGCGGCCTGCTGCTGGACTTCTGGGGCGGCGGCATCAACGGCGGACCGGACCAGAAGCG CATCATCGACGCGCTGACGCCCGCCGAAGGCGACATCCAGCTCACCAAGTGGCGCTACAGCGCGTTCCGCAAGACGGACC TGATGGACCAGATGAAGAAGCTGGGCCGCGATCAGATCCTCATCTCCGGTATCTACGCGCACATCGGCTGCCTGCAGACG GCCAGCGACGCCTTCATGAGCGACGTGCGGCCCTTCCTCATCGCCGACGCGCTGGGTGACTTCTCCCTGGCGCACCACCA GCTCGCGTTGAGCTACGCAGCCCAGCTGTGCGCCGTCACCACCACCACGCAGCAGGTGCTCGACGCGCTGGGCCCCGTCT CCACGTCCAGCACACTCACCCGCGAGCAGGTGCGCGCAGAGGTGGCGGAGCTGCTCCAGGAGTCGCCGGAGGCGCTGGGT GACGACGACAACCTGCTCGAGCGCGGAATGGACTCCATCCGGCTGATGACGCTGGTGGAGAAGTGGCGGGCCGCTGGCGC GGAGACCACCTTCGTGGAGCTGGCCGAACGGCCGACGCTCGCCGACTGGTTCACGCTGCTCTCCCTGGGCAACACGCCCG CTTCCCGGAACGCCGCGTAG
Upstream 100 bases:
>100_bases GGGCGTCGGCAAGGTCAGCAAGAAGGCGCTGCGCGACGTGCTCGCCGGCGCTCCCTCCCCCACTCCGGTTTCGCGCGCGA CGCGCTGAAAGGAACTCCCC
Downstream 100 bases:
>100_bases CTCCGCCGTGCGCGAGTCACCTCGCGCCCCTGACGCATGAACACACGGGAGTCCCTGGCGATGGGCGAAACACACGAAGC AGGTTGGCCGCTGTCCGCGG
Product: isochorismatase
Products: NA
Alternate protein names: 2,3 dihydro-2,3 dihydroxybenzoate synthase; Superoxide-inducible protein 1; SOI1 [H]
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MALPAIAPYPMPGTTDLPKNKVSWTPDPSRAVLLIHDMQRYFVEAFTQGQSPVTELVANIQRLRQHCTALGIPVVYSAQP GGQTPEQRGLLLDFWGGGINGGPDQKRIIDALTPAEGDIQLTKWRYSAFRKTDLMDQMKKLGRDQILISGIYAHIGCLQT ASDAFMSDVRPFLIADALGDFSLAHHQLALSYAAQLCAVTTTTQQVLDALGPVSTSSTLTREQVRAEVAELLQESPEALG DDDNLLERGMDSIRLMTLVEKWRAAGAETTFVELAERPTLADWFTLLSLGNTPASRNAA
Sequences:
>Translated_299_residues MALPAIAPYPMPGTTDLPKNKVSWTPDPSRAVLLIHDMQRYFVEAFTQGQSPVTELVANIQRLRQHCTALGIPVVYSAQP GGQTPEQRGLLLDFWGGGINGGPDQKRIIDALTPAEGDIQLTKWRYSAFRKTDLMDQMKKLGRDQILISGIYAHIGCLQT ASDAFMSDVRPFLIADALGDFSLAHHQLALSYAAQLCAVTTTTQQVLDALGPVSTSSTLTREQVRAEVAELLQESPEALG DDDNLLERGMDSIRLMTLVEKWRAAGAETTFVELAERPTLADWFTLLSLGNTPASRNAA >Mature_298_residues ALPAIAPYPMPGTTDLPKNKVSWTPDPSRAVLLIHDMQRYFVEAFTQGQSPVTELVANIQRLRQHCTALGIPVVYSAQPG GQTPEQRGLLLDFWGGGINGGPDQKRIIDALTPAEGDIQLTKWRYSAFRKTDLMDQMKKLGRDQILISGIYAHIGCLQTA SDAFMSDVRPFLIADALGDFSLAHHQLALSYAAQLCAVTTTTQQVLDALGPVSTSSTLTREQVRAEVAELLQESPEALGD DDNLLERGMDSIRLMTLVEKWRAAGAETTFVELAERPTLADWFTLLSLGNTPASRNAA
Specific function: Required For Production Of 2,3-Dhb. Also Serves As An Aryl Carrier Protein And Plays A Role In Enterobactin Assembly. [C]
COG id: COG1535
COG function: function code Q; Isochorismate hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 acyl carrier domain [H]
Homologues:
Organism=Escherichia coli, GI1786811, Length=288, Percent_Identity=44.4444444444444, Blast_Score=269, Evalue=1e-73,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009081 - InterPro: IPR016291 - InterPro: IPR000868 - InterPro: IPR006163 [H]
Pfam domain/function: PF00857 Isochorismatase; PF00550 PP-binding [H]
EC number: =3.3.2.1 [H]
Molecular weight: Translated: 32664; Mature: 32532
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: PS50075 ACP_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPAIAPYPMPGTTDLPKNKVSWTPDPSRAVLLIHDMQRYFVEAFTQGQSPVTELVANI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHH QRLRQHCTALGIPVVYSAQPGGQTPEQRGLLLDFWGGGINGGPDQKRIIDALTPAEGDIQ HHHHHHHHHHCCCEEEECCCCCCCHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEE LTKWRYSAFRKTDLMDQMKKLGRDQILISGIYAHIGCLQTASDAFMSDVRPFLIADALGD EEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FSLAHHQLALSYAAQLCAVTTTTQQVLDALGPVSTSSTLTREQVRAEVAELLQESPEALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCC DDDNLLERGMDSIRLMTLVEKWRAAGAETTFVELAERPTLADWFTLLSLGNTPASRNAA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure ALPAIAPYPMPGTTDLPKNKVSWTPDPSRAVLLIHDMQRYFVEAFTQGQSPVTELVANI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHH QRLRQHCTALGIPVVYSAQPGGQTPEQRGLLLDFWGGGINGGPDQKRIIDALTPAEGDIQ HHHHHHHHHHCCCEEEECCCCCCCHHHCCCEEEECCCCCCCCCCHHHHHHHHCCCCCCEE LTKWRYSAFRKTDLMDQMKKLGRDQILISGIYAHIGCLQTASDAFMSDVRPFLIADALGD EEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH FSLAHHQLALSYAAQLCAVTTTTQQVLDALGPVSTSSTLTREQVRAEVAELLQESPEALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHCC DDDNLLERGMDSIRLMTLVEKWRAAGAETTFVELAERPTLADWFTLLSLGNTPASRNAA CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8550523; 9384377; 9298659 [H]