Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is pgi [H]
Identifier: 108563530
GI number: 108563530
Start: 1161539
End: 1163176
Strand: Direct
Name: pgi [H]
Synonym: HPAG1_1105
Alternate gene names: 108563530
Gene position: 1161539-1163176 (Clockwise)
Preceding gene: 108563528
Following gene: 108563531
Centisome position: 72.76
GC content: 40.66
Gene sequence:
>1638_bases ATGCTAACCCAATTAAAAACTTATCCAAAATTACTCAAACATTATGAAGAAATCAAAGAAGCGCATATGCGCGATTGGTT TTCCAAAGACAAAGAGCGAGCGAGCCGCTATTTCGTGCAATTTGAAAGCTTGAGTTTGGATTATTCCAAAAACCGCCTGA ACGATACCACTTTAAAGCTTCTTTTTGAATTAGCGAATGACTGCTCTTTAAAAGAAAAGATTGAAGCGATGTTTAAGGGC GAAAAGATCAACACCACCGAAAAAAGGGCCGTTTTACACACCGCTTTAAGAAGCTTGAATGACACTGAAATTTTACTAGA CAACATGGAAGTGTTAAAAAGCGTGAGAAGCGTTTTAAAACGCATGCGAGCCTTTAGCGATAGCGTGAGGAGCGGTAAAA GATTGGGCTATACCAATCAAGTGATCACTGATATTGTCAATATCGGTATTGGGGGGTCAGATTTGGGCGCTTTAATGGTT TGCACCGCCTTAAAACGCTACGGCCACCCGAGATTAAAAATGCATTTTGTGTCTAATGTGGATGGCACACAGATTTTAGA CGTTTTGGAAAAACTCAATCCAGCCAGCACGCTTTTTATCGTGGCTTCTAAGACTTTTTCCACTCAAGAAACCTTAACCA ACGCCCTAACCGCTAGAAAATGGTTTGTAGAAAGAAGCGGCGATGAAAAGCATATCGCTAAGCACTTTGTAGCGGTATCC ACCAATAAAGAAGCCGTGCAACAATTTGGCATTGATGAGCATAACATGTTTGAATTTTGGGATTTTGTAGGGGGGCGTTA TAGCTTGTGGTCGGCTATTGGCTTATCCATTATGATCTATTTGGGGAAGAAAAATTTTAACGCTCTTTTGAAAGGGGCGT ATTTGATGGATGAGCATTTTAGAAACGCCCCTTTTGAAAGCAATTTACCCGTTTTAATGGGGCTAATTGGCGTGTGGTAT ATCAATTTTTTCCAATCCAAAAGCCATTTAATCGCTCCTTACGATCAGTATTTAAGGCATTTCCCTAAATTCATTCAGCA ATTGGATATGGAAAGTAATGGCAAACGCATCAGCAAAAAAGGCGAAACCATCCCCTATGACACATGCCCTGTTGTTTGGG GCGATATGGGCATTAACGCTCAGCATGCCTTTTTCCAACTCTTGCATCAAGGCACGCATTTAATCCCCATTGATTTTATC GCTTCTTTAGATAAAAAACCTAACGCTAAAGGCCATCATGAGATTTTATTCAGCAATGTCTTAGCGCAAGCGCAAGCCTT CATGAAAGGCAAGAGTTATGAAGAAGCGCTTGGGGAATTGCTCTTTAAAGGATTAGACAAAGATGAAGCCAAAGATTTAG CCCACCATAGGGTGTTTTTTGGCAACCGCCCCTCTAATATCCTTTTATTAGAAAAGATTTCACCAAGCAATATTGGGGCG TTAGTGGCTCTTTATGAGCATAAGGTTTTTGTGCAAGGGGTCATTTGGGATATTAACAGCTTTGATCAATGGGGCGTGGA GCTTGGGAAAGAACTGGCCGTGCCGATTTTACAAGAATTAGAAGGGCATAAAAGCAACGCTTATTTTGACAGCTCCACTA AGCACTTAATAGAATTGTATAAGAATTACAACCAATAG
Upstream 100 bases:
>100_bases TCGCCCCATAGTAAGCTAAAATGTTTTTTCTTAACATTTGAAAATTATAATTAAAACTAGCTTATAATACAGCGTTATAT CTTTTCATTAAGGGGTATTG
Downstream 100 bases:
>100_bases GCTTTATCTTACAACAAGATAAAACCTAAAAACAATGAAGCGAAGCTTAACCCCATTCTCAAGCACTCCATTCAAAATGA TCCGTCAATCATAACGGATT
Product: glucose-6-phosphate isomerase
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 545; Mature: 545
Protein sequence:
>545_residues MLTQLKTYPKLLKHYEEIKEAHMRDWFSKDKERASRYFVQFESLSLDYSKNRLNDTTLKLLFELANDCSLKEKIEAMFKG EKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSVRSVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMV CTALKRYGHPRLKMHFVSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHFRNAPFESNLPVLMGLIGVWY INFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKKGETIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFI ASLDKKPNAKGHHEILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKHLIELYKNYNQ
Sequences:
>Translated_545_residues MLTQLKTYPKLLKHYEEIKEAHMRDWFSKDKERASRYFVQFESLSLDYSKNRLNDTTLKLLFELANDCSLKEKIEAMFKG EKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSVRSVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMV CTALKRYGHPRLKMHFVSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHFRNAPFESNLPVLMGLIGVWY INFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKKGETIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFI ASLDKKPNAKGHHEILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKHLIELYKNYNQ >Mature_545_residues MLTQLKTYPKLLKHYEEIKEAHMRDWFSKDKERASRYFVQFESLSLDYSKNRLNDTTLKLLFELANDCSLKEKIEAMFKG EKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSVRSVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMV CTALKRYGHPRLKMHFVSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHFRNAPFESNLPVLMGLIGVWY INFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKKGETIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFI ASLDKKPNAKGHHEILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKHLIELYKNYNQ
Specific function: Involved in glycolysis and in gluconeogenesis. [C]
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
Organism=Homo sapiens, GI18201905, Length=547, Percent_Identity=51.5539305301645, Blast_Score=570, Evalue=1e-163, Organism=Homo sapiens, GI296080693, Length=547, Percent_Identity=48.0804387568556, Blast_Score=517, Evalue=1e-147, Organism=Escherichia coli, GI1790457, Length=542, Percent_Identity=53.1365313653137, Blast_Score=586, Evalue=1e-168, Organism=Caenorhabditis elegans, GI71996703, Length=548, Percent_Identity=49.8175182481752, Blast_Score=550, Evalue=1e-157, Organism=Caenorhabditis elegans, GI71996708, Length=548, Percent_Identity=49.8175182481752, Blast_Score=550, Evalue=1e-157, Organism=Saccharomyces cerevisiae, GI6319673, Length=552, Percent_Identity=49.0942028985507, Blast_Score=521, Evalue=1e-148, Organism=Drosophila melanogaster, GI24651916, Length=548, Percent_Identity=53.8321167883212, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI24651914, Length=548, Percent_Identity=53.8321167883212, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI17737445, Length=548, Percent_Identity=53.8321167883212, Blast_Score=582, Evalue=1e-166,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR023096 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 62345; Mature: 62345
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: PS00765 P_GLUCOSE_ISOMERASE_1 ; PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTQLKTYPKLLKHYEEIKEAHMRDWFSKDKERASRYFVQFESLSLDYSKNRLNDTTLKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSVRSVLK HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYGHPRLKMHFVSNV HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC DGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHF CCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH RNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKK CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCHHCC GETIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLDKKPNAKGHHEILFSNV CCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHH LAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHH LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKHLIELY HHHHHHHHHEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH KNYNQ HCCCC >Mature Secondary Structure MLTQLKTYPKLLKHYEEIKEAHMRDWFSKDKERASRYFVQFESLSLDYSKNRLNDTTLKL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH LFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSVRSVLK HHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYGHPRLKMHFVSNV HHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCC DGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVS CHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCC TNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHF CCHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHH RNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKRISKK CCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHCCCCCCCCHHCC GETIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLDKKPNAKGHHEILFSNV CCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHH LAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGA HHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCCEEEEEECCCCCHHH LVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTKHLIELY HHHHHHHHHEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH KNYNQ HCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA