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The map label for this gene is 108563531

Identifier: 108563531

GI number: 108563531

Start: 1163482

End: 1164897

Strand: Direct

Name: 108563531

Synonym: HPAG1_1106

Alternate gene names: NA

Gene position: 1163482-1164897 (Clockwise)

Preceding gene: 108563530

Following gene: 108563533

Centisome position: 72.88

GC content: 43.29

Gene sequence:

>1416_bases
ATGAAAAAGGCAAGTCAGGTTTTATTCTTTGGGGCATTTTTAAGCTCTTCTTTGCAAGGTTTTGAAGCTAAGCTCAACGG
CTTTGTGGATCAATCCAGCACGATCGGTTTTAACCAGCATAAAATCAATAAAGAAAGAGGCATCTACCCTATGCAGCAAT
TCGCAACGATTGCGGGCTATTTAGGGCTTGGTTTTAGCCTGTTACCCAAAAAGGTTTCAGACCATGTTCTAAAAGGCAAA
ATAGGGGGCATGGTGGGATCTATTTTCTATGACGGCACGAAGAAGTTTGAAGACGGCTCTGTAGCTTACAACCTCTTTGG
TTATTATGATGGGTTCATGGGGGGTTATACAAACATCTTACAAAGCGATGATTTAGCGACACAAAACATGAAACACAATA
AAAATGTCCGCGATTATGTCTTTAGCGATGCATATTTGGAATACGCTTATAAGAATTATTTTGAAATAAAAGCCGGACGC
TATTTATCCACTATGCCTTATAAAAGCGGTCAAACGCAAGGCTTTCAAGTTTCTGGGCAATACAAGCATGCACGCTTGAC
TTGGTTTAGCTCTTTTGGGAGGGCGTTCGCTTATGGTTCGTTTTTAATGGATTGGTTTGCCGCACGGACCACTTATAGCG
GAGGCTTTACCAAAAACGATAAGGGAGGTTATGATAGCCATGGGCGAAAGGTGCTTTATGGTACGCATGCGGTGCAACTC
ACCTATAAACCTCATCGTTTCCTCATAGAAGGCTTTTATTACCTTTCGCCTCAAATCTTTAACGCTCCAGGCGTTAAGAT
TGGTTGGGACTCTAACCCCAATTTTAGCGGCACAGGCTTTCGCTCTGATACGGCTGTCATAGGGTTTTTTCCCATTTACT
ACCCTTGGATGATCGTTAAATCCAATGGAAGCCCAGTCTATAGATACGACACGCCTGCCACTCAAAACGGGCAAAACCTC
ATTATCCGTCAACGCTTTGACATCAACAATTACAATGTTTCCATCGCTTTTTATAAAGTCTTTCAAAACGCTAATGGTTG
GATAGGCAACATGGGGAATCCAAGCGGTGTGATCATGGGGAGTAACAGCGTCTATGCGGGTTTTACAGGCACAGCCCTTA
AAAGAGACGCCGCTACCATTTTCCTTTCTTGTGGTGGCACTCATTTTGCCAAAAAATTCACATGGAAATTCGCCACGCAA
TATTCCAATTCAGTGGTCTCTTGGGAAGCGAGAGCGATGATCTCTTTAGGCTATAAATTCAATGAATATTTGAGCGGTAG
CGTGGATCTTGCGTATTATGGCGTGTATACTAACAAAGGCTTTAAACCGGGTGAAAACGGGCCTGTGCCTAAAGACTTCC
CCGCCCTTTATTCTGACAGGAGCGCGTTATACACGGCTCTAGTAGCATCATTTTGA

Upstream 100 bases:

>100_bases
ACATATTATAATTATTTCAAAGCTAAGAATAATAAAAATCAAAGAATAGATTTATCTTTAAAAGTATTTGCATTTATCAA
TCTCATTTTAGAAGGCATGC

Downstream 100 bases:

>100_bases
TGCTACCCTATGATTATGGTAGGCTTCATTTTGATGCTATCTCCTACGATATGATAGGCGTTTTTTAACGCTGTTTCTCT
CTAATCTCTATATGTAAAAT

Product: outer membrane protein HofH

Products: NA

Alternate protein names: Outer Membrane Protein; Hof Family Outer Membrane Protein; Outer Membrane Protein HofH; Outermembrane Protein HofE; Outer Membrane Protein HofF; Outer Membrane Protein HofA; Outer Membrane Protein HofC; Outer Membrane Protein HofB; Outer Membrane Protein HofD

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGYLGLGFSLLPKKVSDHVLKGK
IGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNILQSDDLATQNMKHNKNVRDYVFSDAYLEYAYKNYFEIKAGR
YLSTMPYKSGQTQGFQVSGQYKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGRKVLYGTHAVQL
TYKPHRFLIEGFYYLSPQIFNAPGVKIGWDSNPNFSGTGFRSDTAVIGFFPIYYPWMIVKSNGSPVYRYDTPATQNGQNL
IIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMGSNSVYAGFTGTALKRDAATIFLSCGGTHFAKKFTWKFATQ
YSNSVVSWEARAMISLGYKFNEYLSGSVDLAYYGVYTNKGFKPGENGPVPKDFPALYSDRSALYTALVASF

Sequences:

>Translated_471_residues
MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGYLGLGFSLLPKKVSDHVLKGK
IGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNILQSDDLATQNMKHNKNVRDYVFSDAYLEYAYKNYFEIKAGR
YLSTMPYKSGQTQGFQVSGQYKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGRKVLYGTHAVQL
TYKPHRFLIEGFYYLSPQIFNAPGVKIGWDSNPNFSGTGFRSDTAVIGFFPIYYPWMIVKSNGSPVYRYDTPATQNGQNL
IIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMGSNSVYAGFTGTALKRDAATIFLSCGGTHFAKKFTWKFATQ
YSNSVVSWEARAMISLGYKFNEYLSGSVDLAYYGVYTNKGFKPGENGPVPKDFPALYSDRSALYTALVASF
>Mature_471_residues
MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGYLGLGFSLLPKKVSDHVLKGK
IGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNILQSDDLATQNMKHNKNVRDYVFSDAYLEYAYKNYFEIKAGR
YLSTMPYKSGQTQGFQVSGQYKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGRKVLYGTHAVQL
TYKPHRFLIEGFYYLSPQIFNAPGVKIGWDSNPNFSGTGFRSDTAVIGFFPIYYPWMIVKSNGSPVYRYDTPATQNGQNL
IIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMGSNSVYAGFTGTALKRDAATIFLSCGGTHFAKKFTWKFATQ
YSNSVVSWEARAMISLGYKFNEYLSGSVDLAYYGVYTNKGFKPGENGPVPKDFPALYSDRSALYTALVASF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52682; Mature: 52682

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
CCCHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCCCHHHHHHHHHH
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNIL
HHCCHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEHHCCHHHHHHHHH
QSDDLATQNMKHNKNVRDYVFSDAYLEYAYKNYFEIKAGRYLSTMPYKSGQTQGFQVSGQ
CCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCCCCCCCCEEEECC
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGRKVLYGTHAVQL
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
TYKPHRFLIEGFYYLSPQIFNAPGVKIGWDSNPNFSGTGFRSDTAVIGFFPIYYPWMIVK
EECCCEEEEEEEEEECCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCEEEEE
SNGSPVYRYDTPATQNGQNLIIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMG
CCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEE
SNSVYAGFTGTALKRDAATIFLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLGYKF
CCCEEECCCCCCCCCCCEEEEEECCCCHHHHHEEEEEEHHHCCCEEEEEEEEEEEECCCH
NEYLSGSVDLAYYGVYTNKGFKPGENGPVPKDFPALYSDRSALYTALVASF
HHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKASQVLFFGAFLSSSLQGFEAKLNGFVDQSSTIGFNQHKINKERGIYPMQQFATIAGY
CCCHHHEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHCCCCCHHHHHHHHHH
LGLGFSLLPKKVSDHVLKGKIGGMVGSIFYDGTKKFEDGSVAYNLFGYYDGFMGGYTNIL
HHCCHHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCEEEEEEEHHCCHHHHHHHHH
QSDDLATQNMKHNKNVRDYVFSDAYLEYAYKNYFEIKAGRYLSTMPYKSGQTQGFQVSGQ
CCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHCEEEEECCCEEEECCCCCCCCCCEEEECC
YKHARLTWFSSFGRAFAYGSFLMDWFAARTTYSGGFTKNDKGGYDSHGRKVLYGTHAVQL
CCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEE
TYKPHRFLIEGFYYLSPQIFNAPGVKIGWDSNPNFSGTGFRSDTAVIGFFPIYYPWMIVK
EECCCEEEEEEEEEECCEEECCCCEEECCCCCCCCCCCCCCCCCEEEEEEHHHCCEEEEE
SNGSPVYRYDTPATQNGQNLIIRQRFDINNYNVSIAFYKVFQNANGWIGNMGNPSGVIMG
CCCCEEEEECCCCCCCCCEEEEEEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEE
SNSVYAGFTGTALKRDAATIFLSCGGTHFAKKFTWKFATQYSNSVVSWEARAMISLGYKF
CCCEEECCCCCCCCCCCEEEEEECCCCHHHHHEEEEEEHHHCCCEEEEEEEEEEEECCCH
NEYLSGSVDLAYYGVYTNKGFKPGENGPVPKDFPALYSDRSALYTALVASF
HHHCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA