Click here to switch to the map view.

The map label for this gene is 108563528

Identifier: 108563528

GI number: 108563528

Start: 1159334

End: 1160308

Strand: Direct

Name: 108563528

Synonym: HPAG1_1103

Alternate gene names: NA

Gene position: 1159334-1160308 (Clockwise)

Preceding gene: 108563527

Following gene: 108563530

Centisome position: 72.62

GC content: 41.64

Gene sequence:

>975_bases
ATGGACCAAGAAATTTTAGATGTATTGATAGTGGGTGCAGGGCCTGGGGGCATTGCCACGGCCGTAGAATGCGAAATAGC
CGGCGTTAAAAAGGTGCTTTTATGCGAAAAAACCGAAAGCCATTCAGGCATGTTAGAGAAGTTTTATAAAGCCGGTAAAA
GGGTTGATAAAGATTATAAAAAGCAAGTCGTAGAGCTTAAAGGGCATATCCCTTTTAAAGACAGCTTTAAAGAAGAGACT
TTAGAGAATTTCACCAACCTTTTAAAAGAGCATCGCATCACGCCAAGCTATAAAACCGATATTGAGAGCGTGAAAAAAGA
AGGCGAATACTTTAAAATCACCACCACTTCTAACACAACCTATCATGCTAAATTTGTGGTGGTTGCGATCGGGAAAATGG
GCCAGCCAAACCGCCCTACTACTTATAAAATCCCTGTTGCGCTCTCTAAACAAGTGGTTTTTAGCATCAATGATTGTAAG
GAAAATGAAAAAACCCTTGTGATCGGCGGAGGCAACTCAGCGGTGGAATACGCCATTGCTTTGTGCAAAACCACCCCTAC
CACCCTCAATTACCGCAAAAAAGAATTCAGCCGCATCAATGAAGACAACGCTAAAAACTTGCAAGAAGTCCTAGGCAATA
ACACGCTTAAAAGCAAGCTTGGAGTGGATATTGAAAGCTTAGAAGAAGATGGCACTCAAATTAAGGTGAATTTCACCGAT
AACACGAGCGAGAGTTTTGATCGCTTGCTGTATGCGATCGGCGGCTCTACCCCTTTAGAGTTTTTTAAACGCTGTTCCTT
AGAATTAGATCCTAGCACCAATATCCCTGTAGTGAAAGAAAATTTAGAGAGCAACAATATCCCTAATTTATTCATCGTGG
GCGATATTTTATTCAAATCAGGAGCAAGCATCGCTACCGCACTCAATCATGGCTATGATGTTGCGCAAGAAATCGCTAAA
AGGTTGCGATCTTAA

Upstream 100 bases:

>100_bases
CTTGAAAGCGTGTTGTATGACAGCGCGAGCGATTTGAACGAAGCGATTTTACAAGAAAAACGCCAAAAGAATTAAAAAGA
ATTAAAATAAAAGGATAGGA

Downstream 100 bases:

>100_bases
AGCCGCTCACTCATCAAACGGCTTAGCCTTATACAAAAAGAAAAAGAGGATGAGAAGCGTTAGAGCAAAATGCATGGTGA
TGATAGTTGGGGGCGAAAAG

Product: thioredoxin reductase

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase [H]

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MDQEILDVLIVGAGPGGIATAVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRVDKDYKKQVVELKGHIPFKDSFKEET
LENFTNLLKEHRITPSYKTDIESVKKEGEYFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCK
ENEKTLVIGGGNSAVEYAIALCKTTPTTLNYRKKEFSRINEDNAKNLQEVLGNNTLKSKLGVDIESLEEDGTQIKVNFTD
NTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAQEIAK
RLRS

Sequences:

>Translated_324_residues
MDQEILDVLIVGAGPGGIATAVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRVDKDYKKQVVELKGHIPFKDSFKEET
LENFTNLLKEHRITPSYKTDIESVKKEGEYFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCK
ENEKTLVIGGGNSAVEYAIALCKTTPTTLNYRKKEFSRINEDNAKNLQEVLGNNTLKSKLGVDIESLEEDGTQIKVNFTD
NTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAQEIAK
RLRS
>Mature_324_residues
MDQEILDVLIVGAGPGGIATAVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRVDKDYKKQVVELKGHIPFKDSFKEET
LENFTNLLKEHRITPSYKTDIESVKKEGEYFKITTTSNTTYHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCK
ENEKTLVIGGGNSAVEYAIALCKTTPTTLNYRKKEFSRINEDNAKNLQEVLGNNTLKSKLGVDIESLEEDGTQIKVNFTD
NTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKSGASIATALNHGYDVAQEIAK
RLRS

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 35942; Mature: 35942

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQEILDVLIVGAGPGGIATAVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRVDKDYK
CCHHEEEEEEECCCCCCCCEEEEEEHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHH
KQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGEYFKITTTSNTT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCE
YHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCKENEKTLVIGGGNSAVEYAIA
EEEEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCEEEEECCCHHHHHHHH
LCKTTPTTLNYRKKEFSRINEDNAKNLQEVLGNNTLKSKLGVDIESLEEDGTQIKVNFTD
HHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEEECC
NTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKS
CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEHHHHHC
GASIATALNHGYDVAQEIAKRLRS
CCHHHHHHHCCHHHHHHHHHHHCC
>Mature Secondary Structure
MDQEILDVLIVGAGPGGIATAVECEIAGVKKVLLCEKTESHSGMLEKFYKAGKRVDKDYK
CCHHEEEEEEECCCCCCCCEEEEEEHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCHHHH
KQVVELKGHIPFKDSFKEETLENFTNLLKEHRITPSYKTDIESVKKEGEYFKITTTSNTT
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEEEECCCCE
YHAKFVVVAIGKMGQPNRPTTYKIPVALSKQVVFSINDCKENEKTLVIGGGNSAVEYAIA
EEEEEEEEEECCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCEEEEECCCHHHHHHHH
LCKTTPTTLNYRKKEFSRINEDNAKNLQEVLGNNTLKSKLGVDIESLEEDGTQIKVNFTD
HHCCCCCCCCHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHCCCHHHHCCCCCEEEEEECC
NTSESFDRLLYAIGGSTPLEFFKRCSLELDPSTNIPVVKENLESNNIPNLFIVGDILFKS
CCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCEEEEEEHHHHHC
GASIATALNHGYDVAQEIAKRLRS
CCHHHHHHHCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA