Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
---|---|
Accession | NC_008086 |
Length | 1,596,366 |
Click here to switch to the map view.
The map label for this gene is 108563527
Identifier: 108563527
GI number: 108563527
Start: 1159117
End: 1159308
Strand: Direct
Name: 108563527
Synonym: HPAG1_1102
Alternate gene names: NA
Gene position: 1159117-1159308 (Clockwise)
Preceding gene: 108563523
Following gene: 108563528
Centisome position: 72.61
GC content: 39.06
Gene sequence:
>192_bases ATGAATACAGAAATTTTAACCATCATGTTAGTTGTCTCAGTGCTTATGGGATTGGTAGGCTTAATAGCGTTTTTATGGGG GGTTAAAAGCGGTCAGTTTGACGATGAAAAACGCATGCTTGAAAGCGTGTTGTATGACAGCGCGAGCGATTTGAACGAAG CGATTTTACAAGAAAAACGCCAAAAGAATTAA
Upstream 100 bases:
>100_bases TCATTTTCATGTTATCCAAACTTATTCAACCTATTGGTGATTTAAATACTATCTTTTAGTATAATGACAGCATTATCCTA ATAACCTAAAAGATATAGAG
Downstream 100 bases:
>100_bases AAAGAATTAAAATAAAAGGATAGGAATGGACCAAGAAATTTTAGATGTATTGATAGTGGGTGCAGGGCCTGGGGGCATTG CCACGGCCGTAGAATGCGAA
Product: cation transport subunit for cbb3-type oxidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MNTEILTIMLVVSVLMGLVGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQKN
Sequences:
>Translated_63_residues MNTEILTIMLVVSVLMGLVGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQKN >Mature_63_residues MNTEILTIMLVVSVLMGLVGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKRQKN
Specific function: Unknown
COG id: COG3197
COG function: function code P; Uncharacterized protein, possibly involved in nitrogen fixation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7102; Mature: 7102
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTEILTIMLVVSVLMGLVGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QKN CCC >Mature Secondary Structure MNTEILTIMLVVSVLMGLVGLIAFLWGVKSGQFDDEKRMLESVLYDSASDLNEAILQEKR CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH QKN CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA