Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is pgl [H]
Identifier: 108563465
GI number: 108563465
Start: 1095403
End: 1096086
Strand: Direct
Name: pgl [H]
Synonym: HPAG1_1040
Alternate gene names: 108563465
Gene position: 1095403-1096086 (Clockwise)
Preceding gene: 108563464
Following gene: 108563466
Centisome position: 68.62
GC content: 39.04
Gene sequence:
>684_bases ATGGGTTATCAATTGTTTGAATTTGAAAATTTGAAAGATTGCCACAAGGCTTTAATAGAGCGTTTTAAAGAATTTTTTAA CACCGCCTTAAAAAAGCACCATCAAGTTTCTATCGCTTTTTCTGGGGGCCGTTCGCCCATTAGCTTGTTGCAAAAATTAA GCGTTTTAGATCTCAAATGGCATGAGTGTTTAATCAGTTTGGTAGATGAACGCATTATAGACACAAGCCACAAGGATAGC AACACCAAATTATTACACGACTACTTGTTGCAAAATAACGCCTTAAAAGCTTCTTTCACCCCGCTTTTGCCCAAAAAGAT TTCTAGCGATACAAACGCGCTTTTTCATTTTGCTAACCAGCATTTCAAACAGCCCCATTTAGCCATTTTGGGCATGGGGA CTGATGGGCATACGGCTAGCCTTTTTCCTGAAACGAGCGCTTTTTTAAACGAAGAAAAAGAAAATATCGTTTTGACTAAG CCCGCTAACGCTCCTTATGAGCGCCTGAGCATGTCTGTTAACGCCTTAGAAAATTGCGAAAAACTTTTCTTAAGCATTAG CGGAGTAGAAAAAAGGGAGGTTTTAGAAAAGGCTTTAAAAGAAAACGCTCCCTATTCTCTGCCGATTGCTCGGATTTTAC ATTCTAAAAAAGTTACCACGGAGGTGTTTTATGCCAAAAACTGA
Upstream 100 bases:
>100_bases GAGGGCTTTATGAATAACGCCACGCCCTTACATTCCTATGAAAGCCATAATCTCAACGAATCCGAATTTTTAAAACCACT CTATCAATAAAAGGGATTTC
Downstream 100 bases:
>100_bases AACTTACCCAAGACTATTAGCCGATATTGGCGGCACGAACGCACGCTTTGGTTTGGAAGTCGCCCCACGACAGATTGAAT GCATTGAAGTCTTGCGGTGC
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MGYQLFEFENLKDCHKALIERFKEFFNTALKKHHQVSIAFSGGRSPISLLQKLSVLDLKWHECLISLVDERIIDTSHKDS NTKLLHDYLLQNNALKASFTPLLPKKISSDTNALFHFANQHFKQPHLAILGMGTDGHTASLFPETSAFLNEEKENIVLTK PANAPYERLSMSVNALENCEKLFLSISGVEKREVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN
Sequences:
>Translated_227_residues MGYQLFEFENLKDCHKALIERFKEFFNTALKKHHQVSIAFSGGRSPISLLQKLSVLDLKWHECLISLVDERIIDTSHKDS NTKLLHDYLLQNNALKASFTPLLPKKISSDTNALFHFANQHFKQPHLAILGMGTDGHTASLFPETSAFLNEEKENIVLTK PANAPYERLSMSVNALENCEKLFLSISGVEKREVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN >Mature_226_residues GYQLFEFENLKDCHKALIERFKEFFNTALKKHHQVSIAFSGGRSPISLLQKLSVLDLKWHECLISLVDERIIDTSHKDSN TKLLHDYLLQNNALKASFTPLLPKKISSDTNALFHFANQHFKQPHLAILGMGTDGHTASLFPETSAFLNEEKENIVLTKP ANAPYERLSMSVNALENCEKLFLSISGVEKREVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG0363
COG function: function code G; 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI52145310, Length=209, Percent_Identity=30.622009569378, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 [H]
Pfam domain/function: NA
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 25780; Mature: 25649
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYQLFEFENLKDCHKALIERFKEFFNTALKKHHQVSIAFSGGRSPISLLQKLSVLDLKW CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH HECLISLVDERIIDTSHKDSNTKLLHDYLLQNNALKASFTPLLPKKISSDTNALFHFANQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH HFKQPHLAILGMGTDGHTASLFPETSAFLNEEKENIVLTKPANAPYERLSMSVNALENCE HCCCCCEEEEEECCCCCCEECCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH KLFLSISGVEKREVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHEEEEECC >Mature Secondary Structure GYQLFEFENLKDCHKALIERFKEFFNTALKKHHQVSIAFSGGRSPISLLQKLSVLDLKW CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHH HECLISLVDERIIDTSHKDSNTKLLHDYLLQNNALKASFTPLLPKKISSDTNALFHFANQ HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH HFKQPHLAILGMGTDGHTASLFPETSAFLNEEKENIVLTKPANAPYERLSMSVNALENCE HCCCCCEEEEEECCCCCCEECCCCHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH KLFLSISGVEKREVLEKALKENAPYSLPIARILHSKKVTTEVFYAKN HHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]