Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is zwf [H]
Identifier: 108563464
GI number: 108563464
Start: 1094115
End: 1095392
Strand: Direct
Name: zwf [H]
Synonym: HPAG1_1039
Alternate gene names: 108563464
Gene position: 1094115-1095392 (Clockwise)
Preceding gene: 108563460
Following gene: 108563465
Centisome position: 68.54
GC content: 37.17
Gene sequence:
>1278_bases ATGTTGGATTTTGATTTGGTTCTTTTTGGTGCGACTGGGGATTTAGCCATGCGAAAGCTCTTTGTTTCGCTCTATGAAAT TTATACCCATTATGGTTTTAAAAAAGATTCTAAAATTATCGCATCGGGGCGTAAGGAACTATCCAATGAAGAATTTTTAG TGCTCCTTTGTGAAAAAACGCAGTTGCATTCAAGAGAAAAGGGTGAGGAATTTTTAGCCCATATCAGTTATTTTTGCGTC CGTTTGGATAACCCTAAAGACTTTGAAGAACTGAGTAAAATCGCTACAAAAAATAAGCCCTTGATTTTCTACTTTTCTAT CTCGCCTAGTTTTTTTGCAACGACCGCCCAACATTTAGCCCAAAACGCGCTCAATCACGCTAATACGCGCTTGATTTTAG AAAAGCCTTTAGGGCATGATTTAAAGACTTGTAAAGAGATTTTCCAAAGCATTAGTGCTTTTTTTAAAGAAGAACAAATC TTTAGAATCGATCATTATTTAGGGAAAAAGGGCGTTCAAAATATCCTTGAATTGCGCTTAAATAACCCTATCTTAAACAT TTTATGGGATCAAATCAGTGCAGTTGAAATCTGCGTGTATGAGACTTTAGGGGTGGAAGAAAGGGGCGAATTTTACGATA AAATCGGGGCTTTAAGGGATATGGTTCAAAACCATCTCTTGCAAGTTTTATCCCTTATCGCTACAGATTTACCCAACGAT TTAAAGGATTTGAGGAAAGAAAAAATCAAAGTTTTAAAAACCTTACAACCCCCCAAAGATTTCAAAAAACAAGTTATTCG GGCCCAGTATCAAGGCTATAGAGATGAAAATAAGGTTAATAAAGAGAGCCAGACAGAAACTTTTGTCGCTATTAAGGCCT TTTTGGATACGCCCAAATTTAAAGGCGTGCCTTTCTATCTCAAGCACGCTAAAAAAATGCCCCACAACCAAGCGAGCGTG AAAATCCATTTTAATGCAGTCAATACGCTAGAATTTTTTCTCTCTCAAGATAAAATCACCCTCACCCTAAAAGACAATCA AAACCCCCTTATTTTAGAAACCCATAACAAACAAGAATTTTTACAGCCCTACGCTAAATTGCTCTATGATGCGATAGGAA ATAACCACAATAATTTCGCCCACCAGCTGGAACTAGAAGCGTCATGGGTTTTTATTGACACGCTTATAGAGGGCTTTATG AATAACGCCACGCCCTTACATTCCTATGAAAGCCATAATCTCAACGAATCCGAATTTTTAAAACCACTCTATCAATAA
Upstream 100 bases:
>100_bases TTTTCTTTGATTTGTTCTAAAGAATGCTTAGGCATGAACACCCCTTCAATTAAGATTTAATATATAATAATAACTTAAAA ACACTCTAAAAGGGTTATTG
Downstream 100 bases:
>100_bases AAGGGATTTCATGGGTTATCAATTGTTTGAATTTGAAAATTTGAAAGATTGCCACAAGGCTTTAATAGAGCGTTTTAAAG AATTTTTTAACACCGCCTTA
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLVLLCEKTQLHSREKGEEFLAHISYFCV RLDNPKDFEELSKIATKNKPLIFYFSISPSFFATTAQHLAQNALNHANTRLILEKPLGHDLKTCKEIFQSISAFFKEEQI FRIDHYLGKKGVQNILELRLNNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVNKESQTETFVAIKAFLDTPKFKGVPFYLKHAKKMPHNQASV KIHFNAVNTLEFFLSQDKITLTLKDNQNPLILETHNKQEFLQPYAKLLYDAIGNNHNNFAHQLELEASWVFIDTLIEGFM NNATPLHSYESHNLNESEFLKPLYQ
Sequences:
>Translated_425_residues MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLVLLCEKTQLHSREKGEEFLAHISYFCV RLDNPKDFEELSKIATKNKPLIFYFSISPSFFATTAQHLAQNALNHANTRLILEKPLGHDLKTCKEIFQSISAFFKEEQI FRIDHYLGKKGVQNILELRLNNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVNKESQTETFVAIKAFLDTPKFKGVPFYLKHAKKMPHNQASV KIHFNAVNTLEFFLSQDKITLTLKDNQNPLILETHNKQEFLQPYAKLLYDAIGNNHNNFAHQLELEASWVFIDTLIEGFM NNATPLHSYESHNLNESEFLKPLYQ >Mature_425_residues MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLVLLCEKTQLHSREKGEEFLAHISYFCV RLDNPKDFEELSKIATKNKPLIFYFSISPSFFATTAQHLAQNALNHANTRLILEKPLGHDLKTCKEIFQSISAFFKEEQI FRIDHYLGKKGVQNILELRLNNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVNKESQTETFVAIKAFLDTPKFKGVPFYLKHAKKMPHNQASV KIHFNAVNTLEFFLSQDKITLTLKDNQNPLILETHNKQEFLQPYAKLLYDAIGNNHNNFAHQLELEASWVFIDTLIEGFM NNATPLHSYESHNLNESEFLKPLYQ
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=444, Percent_Identity=27.2522522522523, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI109389365, Length=444, Percent_Identity=27.2522522522523, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI52145310, Length=353, Percent_Identity=29.7450424929178, Blast_Score=155, Evalue=6e-38, Organism=Escherichia coli, GI1788158, Length=454, Percent_Identity=33.7004405286344, Blast_Score=248, Evalue=5e-67, Organism=Caenorhabditis elegans, GI17538218, Length=445, Percent_Identity=29.438202247191, Blast_Score=196, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6324088, Length=445, Percent_Identity=31.9101123595506, Blast_Score=209, Evalue=7e-55, Organism=Drosophila melanogaster, GI24643352, Length=434, Percent_Identity=29.9539170506912, Blast_Score=187, Evalue=8e-48, Organism=Drosophila melanogaster, GI24643350, Length=434, Percent_Identity=29.9539170506912, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI221513548, Length=361, Percent_Identity=26.5927977839335, Blast_Score=136, Evalue=3e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 49311; Mature: 49311
Theoretical pI: Translated: 7.28; Mature: 7.28
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLVLLCEKT CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCH QLHSREKGEEFLAHISYFCVRLDNPKDFEELSKIATKNKPLIFYFSISPSFFATTAQHLA HHCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH QNALNHANTRLILEKPLGHDLKTCKEIFQSISAFFKEEQIFRIDHYLGKKGVQNILELRL HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC NNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVNKESQTETFVAIKAFLDTPKF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCCCC KGVPFYLKHAKKMPHNQASVKIHFNAVNTLEFFLSQDKITLTLKDNQNPLILETHNKQEF CCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCEEEEEEECCCCCEEEEECCHHHH LQPYAKLLYDAIGNNHNNFAHQLELEASWVFIDTLIEGFMNNATPLHSYESHNLNESEFL HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH KPLYQ HHHCC >Mature Secondary Structure MLDFDLVLFGATGDLAMRKLFVSLYEIYTHYGFKKDSKIIASGRKELSNEEFLVLLCEKT CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCEEEEEECCH QLHSREKGEEFLAHISYFCVRLDNPKDFEELSKIATKNKPLIFYFSISPSFFATTAQHLA HHCCHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH QNALNHANTRLILEKPLGHDLKTCKEIFQSISAFFKEEQIFRIDHYLGKKGVQNILELRL HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHC NNPILNILWDQISAVEICVYETLGVEERGEFYDKIGALRDMVQNHLLQVLSLIATDLPND CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH LKDLRKEKIKVLKTLQPPKDFKKQVIRAQYQGYRDENKVNKESQTETFVAIKAFLDTPKF HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHCCCCC KGVPFYLKHAKKMPHNQASVKIHFNAVNTLEFFLSQDKITLTLKDNQNPLILETHNKQEF CCCCHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHCCCEEEEEEECCCCCEEEEECCHHHH LQPYAKLLYDAIGNNHNNFAHQLELEASWVFIDTLIEGFMNNATPLHSYESHNLNESEFL HHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH KPLYQ HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]