Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is glk [H]
Identifier: 108563466
GI number: 108563466
Start: 1096073
End: 1097083
Strand: Direct
Name: glk [H]
Synonym: HPAG1_1041
Alternate gene names: 108563466
Gene position: 1096073-1097083 (Clockwise)
Preceding gene: 108563465
Following gene: 108563467
Centisome position: 68.66
GC content: 46.49
Gene sequence:
>1011_bases ATGCCAAAAACTGAAACTTACCCAAGACTATTAGCCGATATTGGCGGCACGAACGCACGCTTTGGTTTGGAAGTCGCCCC ACGACAGATTGAATGCATTGAAGTCTTGCGGTGCGAAGATTTTGAGAGCTTGAGCGATGCGGTGCGGTTTTACCTTTCTA AATGCAAAGAAAGCCTTAAACTGCACCCTATTTATGGCTCTTTTGCTGTGGCTACGCCCATTATGGGGGATTTTGTCCAA ATGACGAACAACCATTGGACTTTTTCTATTGAAACGACACGGCAATGTTTGACTTTAAAAAAATTGCTTGTCATCAATGA TTTTGTCGCGCAAGCCTATGCCATTAGCGCGATGCAAGAAAACGATCTGGCTCAAATAGGCGGGATTAAGTGCGAAATCA ACGCTCCTAAAGCGATTTTAGGGCCAGGAACCGGGCTTGGGGTAAGCACTCTTATCCAAAACAGCGATGGCTCTTTAAAA GTCTTGCCCGGTGAAGGAGGGCATGTGAGCTTTGCCCCTTTTGACGATCTAGAAATTTTAGTGTGGCAATACGCCCGCTC TAAATTCAATCATGTGAGCGCGGAAAGGTTTTTGAGCGGGAGCGGTCTGGTGCTGATTTATGAAGCCCTGTCTAAACGCA AAGGCTTAGAAAAAGTGGCGAAGTTAAGCAAGGCTGAATTAACCCCACAAATCATTAGCGAACGCGCTTTGAATGGGGAT TACCCTATATGCCGATTGACCTTGGACACTTTTTGCTCCATGCTAGGCACGCTCGCTGCTGATGTGGCTCTCACTTTGGG GGCTAGGGGGGGCGTGTATTTGTGTGGGGGGATTATCCCACGATTCATTGATTATTTTAAAACTTCGCCCTTTAGAGCGC GTTTTGAAACGAAAGGGCGCATGGGAGCGTTTCTCGCTTCTATCCCTGTGCATGTCGTGATGAAAAAAACTCCGGGACTT GATGGGGCAGGCATTGCGTTAGAGAATTATTTACTGCATGATAAAATTTAG
Upstream 100 bases:
>100_bases AAAAGGGAGGTTTTAGAAAAGGCTTTAAAAGAAAACGCTCCCTATTCTCTGCCGATTGCTCGGATTTTACATTCTAAAAA AGTTACCACGGAGGTGTTTT
Downstream 100 bases:
>100_bases CAAGTAGTAGCCGCTTAAGATAAAAGCGATTAGTGTAAGGGGTGCGTTTAAACGCGCCAAACAACGATACCATATAGCCA ATAACTATCAAATTAGTTAA
Product: glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MPKTETYPRLLADIGGTNARFGLEVAPRQIECIEVLRCEDFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDFVQ MTNNHWTFSIETTRQCLTLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSDGSLK VLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGD YPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGL DGAGIALENYLLHDKI
Sequences:
>Translated_336_residues MPKTETYPRLLADIGGTNARFGLEVAPRQIECIEVLRCEDFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDFVQ MTNNHWTFSIETTRQCLTLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSDGSLK VLPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGD YPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGL DGAGIALENYLLHDKI >Mature_335_residues PKTETYPRLLADIGGTNARFGLEVAPRQIECIEVLRCEDFESLSDAVRFYLSKCKESLKLHPIYGSFAVATPIMGDFVQM TNNHWTFSIETTRQCLTLKKLLVINDFVAQAYAISAMQENDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSDGSLKV LPGEGGHVSFAPFDDLEILVWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGDY PICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGRMGAFLASIPVHVVMKKTPGLD GAGIALENYLLHDKI
Specific function: Not Highly Important In E.Coli As Glucose Is Transported Into The Cell By The Pts System Already As Glucose 6-Phosphate. [C]
COG id: COG0837
COG function: function code G; Glucokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial glucokinase family [H]
Homologues:
Organism=Escherichia coli, GI1788732, Length=325, Percent_Identity=41.5384615384615, Blast_Score=238, Evalue=3e-64,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 [H]
Pfam domain/function: PF02685 Glucokinase [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 36732; Mature: 36601
Theoretical pI: Translated: 7.99; Mature: 7.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKTETYPRLLADIGGTNARFGLEVAPRQIECIEVLRCEDFESLSDAVRFYLSKCKESLK CCCCCHHHHHHHHCCCCCCEECEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCE LHPIYGSFAVATPIMGDFVQMTNNHWTFSIETTRQCLTLKKLLVINDFVAQAYAISAMQE EEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSDGSLKVLPGEGGHVSFAPFDDLEIL CCHHHHCCEEEEECCCCEEECCCCCCCHHHHEECCCCCEEEECCCCCEEEECCCCCHHHH VWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGD HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCC YPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGR CCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEECCCCCC MGAFLASIPVHVVMKKTPGLDGAGIALENYLLHDKI HHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure PKTETYPRLLADIGGTNARFGLEVAPRQIECIEVLRCEDFESLSDAVRFYLSKCKESLK CCCCHHHHHHHHCCCCCCEECEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCE LHPIYGSFAVATPIMGDFVQMTNNHWTFSIETTRQCLTLKKLLVINDFVAQAYAISAMQE EEECCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NDLAQIGGIKCEINAPKAILGPGTGLGVSTLIQNSDGSLKVLPGEGGHVSFAPFDDLEIL CCHHHHCCEEEEECCCCEEECCCCCCCHHHHEECCCCCEEEECCCCCEEEECCCCCHHHH VWQYARSKFNHVSAERFLSGSGLVLIYEALSKRKGLEKVAKLSKAELTPQIISERALNGD HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCC YPICRLTLDTFCSMLGTLAADVALTLGARGGVYLCGGIIPRFIDYFKTSPFRARFETKGR CCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCCEECCCCCC MGAFLASIPVHVVMKKTPGLDGAGIALENYLLHDKI HHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA