Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is cheW [H]
Identifier: 108563426
GI number: 108563426
Start: 1057061
End: 1057558
Strand: Direct
Name: cheW [H]
Synonym: HPAG1_1001
Alternate gene names: 108563426
Gene position: 1057061-1057558 (Clockwise)
Preceding gene: 108563425
Following gene: 108563428
Centisome position: 66.22
GC content: 38.15
Gene sequence:
>498_bases GTGAGCAACCAATTAAAAGATTTATTTGAAAGACAAAAAGAAGCTAATGCAGGTTCTAAACCAGAAGACAATGAAGAAAT TTTGCAATTCATTGGCTTTATTATTGGCGATGAAGAATACGCCATTCCCATTTTGAATATTTTAGAAATCGTCAAACCCA TTGGTTACACACGAGTCCCTGAAACCCCAAACTATGTGCTTGGCGTGTTCAATTTAAGGGGTAATGTCTTCCCGTTGATT AGCCTGCGTTTAAAATTTGGCTTGAAAGCTGAAAAGCAAAACAAAGACACTCGTTATCTGGTGGTGCGCCATAATGATCA GATCGCTGGGTTTTTCATCGATCGCTTAACTGAAGCCATTCGCATCAAGCAAACGGATATTGATCCGGTGCCAGAAACTT TGAGCGATAACAATAATTTAACTTATGGTATTGGGAAGCAAAACGACAGACTCGTAACCATTTTAAGAGTGGAAGAAATC TTAAAGAAAGACTTCTAA
Upstream 100 bases:
>100_bases GCGTTGAATCCGGCATGACTGAATACATCACCAAACCTTATAGCGGTGAGTATTTAACCACCGTAGTGAAGCGCAGTATT AAATTAGAAGGAGACCAATC
Downstream 100 bases:
>100_bases AAACCTTTTCTATCCAAATAAGCCCCTGTAGGCTTTGAGAAAGACTTATCCCATTAAAAAGCTTGATTTTAATCAAGCGA TAATGTTTGATTCAAAACAG
Product: CheA-MCP coupling protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLI SLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEI LKKDF
Sequences:
>Translated_165_residues MSNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLI SLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEI LKKDF >Mature_164_residues SNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVPETPNYVLGVFNLRGNVFPLIS LRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAIRIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEIL KKDF
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=148, Percent_Identity=30.4054054054054, Blast_Score=81, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18977; Mature: 18846
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVP CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC ETPNYVLGVFNLRGNVFPLISLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAI CCCCEEEEEEECCCCEEHHEEEEHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEILKKDF HHCCCCCCCCCHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHCC >Mature Secondary Structure SNQLKDLFERQKEANAGSKPEDNEEILQFIGFIIGDEEYAIPILNILEIVKPIGYTRVP CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCC ETPNYVLGVFNLRGNVFPLISLRLKFGLKAEKQNKDTRYLVVRHNDQIAGFFIDRLTEAI CCCCEEEEEEECCCCEEHHEEEEHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RIKQTDIDPVPETLSDNNNLTYGIGKQNDRLVTILRVEEILKKDF HHCCCCCCCCCHHHCCCCCEEEECCCCCCCEEEHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]