Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

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The map label for this gene is 108563192

Identifier: 108563192

GI number: 108563192

Start: 803088

End: 804377

Strand: Direct

Name: 108563192

Synonym: HPAG1_0767

Alternate gene names: NA

Gene position: 803088-804377 (Clockwise)

Preceding gene: 108563191

Following gene: 108563193

Centisome position: 50.31

GC content: 37.52

Gene sequence:

>1290_bases
ATGCCATACGCCTTAAGAAAAAGATTTTTCAAACGCTTTGCGCTGATTGTTTCCACTTTTTGTGCGATAAGCTTGAACGC
TAAAAGCTATCTGTTTTCCCCACTGCCCCCAGCGCACCAACAAATCATTAAGACAGAGCCTTGCTCTTTGGAATGCTTGA
AAGACTTGATGCTGCAAAATCAAATCTTTTCTTTTGTGTCTCAATACGATAACAACAACCAAGATGAGAGCCTTAAAACT
TATTATCATGACATACTCAATAAACTCAACCCTGCATTCATCGCTTCTCAAACTCCAGCTAAAGAAAGCTATGAGCCTAA
GATTGAATTAGCGGTTTTACTGCCTAAAAAAATCGTTGGGCGTTATGCCATTTCGGTGATGAACACCCTTTTAGCGTATT
TGAACACCAGAAACAACGATTTCAATATCCAAGTCTTTGACAGCGATGAAGAAAGCCCTGAAAAATTAGAGCAAACCTAT
AAAGAAATTGAAAAAGAAAAATTCCCTTTTGTGATAGCTTTATTGACTAAAGAGGGCGTGGAAAATTTGCTCCAAAACAC
GACCATTAGCACCCCTACTTATGTGCCTACGGTGAATAGAGCGCAATTAGAAAATCAAACTGAGCGTTCTTTAAGCGAAC
GCTTGTATTTTGGGGGGATTGATTATAAAGAGCAATTAGGCATGCTCGCAACTTTCATTAACCCTAATTCGCCCGTGATT
GAATACGATGATGATGGCCTAATAGGTGAACGCTTGAGGCAAATCACGGAGTCTTTAAGCATTGAAGTCAAACACCAAGA
AAATATTTCTTACAAGCAAGCCACCAGTTTTTCTAAAAATTTTAGAAAAAACGATGCGTTTTTTAAAAATTCTATTTTGA
TTTTAAACACCCCTACCACTAAAAGCGGTCTGATCCTTTCTCAAATAGGGCTTTTAGAATATAAGCCCTTTAAAATCCTT
TCCACACAAATCAATTTCAACCCCTCTTTACTCTTACTCACCCAGCCTAAAGACAGAAAAGATTTATTCATTGTCAATGC
CTTACAAAATAGCGATGAAACGCTGATAGAATACGCTTCCTTATTGGAGAGCGATTTAAGGCATGATTGGGTGAATTATT
CTAGTGCAATCGGGCTAGAGGTGTTTTTAAACACGCTAGATCCGCATTTTAAAAAGTCTTTTCAAGAGAGTTTAGAAGAC
AATCAAGTCCGTTACCACAATCAAATTTATCAGGCTTTAGGGTATTCTTTTGAGCCGATAAAAAATGAAAGCGGAACAAA
AAAAGAATAA

Upstream 100 bases:

>100_bases
CCTCTTGTTGGGTTGTAGGGGTAAAATCAGTCCCCTTGTTAGGGTTAATTATTCTATAATAATAAAATTTTAGGAAATTC
AGTTTAAAAGATATTAAAAA

Downstream 100 bases:

>100_bases
TATTTAGATAATTATTTGAATACTTTCATTTTTAATCGGTTTTTAATAAAATTGGAATATGATACGAGCGAAAATTAAAC
AAAGGTTATTCTGTGTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MPYALRKRFFKRFALIVSTFCAISLNAKSYLFSPLPPAHQQIIKTEPCSLECLKDLMLQNQIFSFVSQYDNNNQDESLKT
YYHDILNKLNPAFIASQTPAKESYEPKIELAVLLPKKIVGRYAISVMNTLLAYLNTRNNDFNIQVFDSDEESPEKLEQTY
KEIEKEKFPFVIALLTKEGVENLLQNTTISTPTYVPTVNRAQLENQTERSLSERLYFGGIDYKEQLGMLATFINPNSPVI
EYDDDGLIGERLRQITESLSIEVKHQENISYKQATSFSKNFRKNDAFFKNSILILNTPTTKSGLILSQIGLLEYKPFKIL
STQINFNPSLLLLTQPKDRKDLFIVNALQNSDETLIEYASLLESDLRHDWVNYSSAIGLEVFLNTLDPHFKKSFQESLED
NQVRYHNQIYQALGYSFEPIKNESGTKKE

Sequences:

>Translated_429_residues
MPYALRKRFFKRFALIVSTFCAISLNAKSYLFSPLPPAHQQIIKTEPCSLECLKDLMLQNQIFSFVSQYDNNNQDESLKT
YYHDILNKLNPAFIASQTPAKESYEPKIELAVLLPKKIVGRYAISVMNTLLAYLNTRNNDFNIQVFDSDEESPEKLEQTY
KEIEKEKFPFVIALLTKEGVENLLQNTTISTPTYVPTVNRAQLENQTERSLSERLYFGGIDYKEQLGMLATFINPNSPVI
EYDDDGLIGERLRQITESLSIEVKHQENISYKQATSFSKNFRKNDAFFKNSILILNTPTTKSGLILSQIGLLEYKPFKIL
STQINFNPSLLLLTQPKDRKDLFIVNALQNSDETLIEYASLLESDLRHDWVNYSSAIGLEVFLNTLDPHFKKSFQESLED
NQVRYHNQIYQALGYSFEPIKNESGTKKE
>Mature_428_residues
PYALRKRFFKRFALIVSTFCAISLNAKSYLFSPLPPAHQQIIKTEPCSLECLKDLMLQNQIFSFVSQYDNNNQDESLKTY
YHDILNKLNPAFIASQTPAKESYEPKIELAVLLPKKIVGRYAISVMNTLLAYLNTRNNDFNIQVFDSDEESPEKLEQTYK
EIEKEKFPFVIALLTKEGVENLLQNTTISTPTYVPTVNRAQLENQTERSLSERLYFGGIDYKEQLGMLATFINPNSPVIE
YDDDGLIGERLRQITESLSIEVKHQENISYKQATSFSKNFRKNDAFFKNSILILNTPTTKSGLILSQIGLLEYKPFKILS
TQINFNPSLLLLTQPKDRKDLFIVNALQNSDETLIEYASLLESDLRHDWVNYSSAIGLEVFLNTLDPHFKKSFQESLEDN
QVRYHNQIYQALGYSFEPIKNESGTKKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49409; Mature: 49278

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYALRKRFFKRFALIVSTFCAISLNAKSYLFSPLPPAHQQIIKTEPCSLECLKDLMLQN
CCHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
QIFSFVSQYDNNNQDESLKTYYHDILNKLNPAFIASQTPAKESYEPKIELAVLLPKKIVG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECHHHHHH
RYAISVMNTLLAYLNTRNNDFNIQVFDSDEESPEKLEQTYKEIEKEKFPFVIALLTKEGV
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHH
ENLLQNTTISTPTYVPTVNRAQLENQTERSLSERLYFGGIDYKEQLGMLATFINPNSPVI
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHEEECCCCCEE
EYDDDGLIGERLRQITESLSIEVKHQENISYKQATSFSKNFRKNDAFFKNSILILNTPTT
EECCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCHHHCCEEEEECCCC
KSGLILSQIGLLEYKPFKILSTQINFNPSLLLLTQPKDRKDLFIVNALQNSDETLIEYAS
CCCHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHH
LLESDLRHDWVNYSSAIGLEVFLNTLDPHFKKSFQESLEDNQVRYHNQIYQALGYSFEPI
HHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC
KNESGTKKE
CCCCCCCCC
>Mature Secondary Structure 
PYALRKRFFKRFALIVSTFCAISLNAKSYLFSPLPPAHQQIIKTEPCSLECLKDLMLQN
CHHHHHHHHHHHHHHHHHHHHEEECCHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHH
QIFSFVSQYDNNNQDESLKTYYHDILNKLNPAFIASQTPAKESYEPKIELAVLLPKKIVG
HHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEECHHHHHH
RYAISVMNTLLAYLNTRNNDFNIQVFDSDEESPEKLEQTYKEIEKEKFPFVIALLTKEGV
HHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEHHHHHHH
ENLLQNTTISTPTYVPTVNRAQLENQTERSLSERLYFGGIDYKEQLGMLATFINPNSPVI
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHEEECCCCCEE
EYDDDGLIGERLRQITESLSIEVKHQENISYKQATSFSKNFRKNDAFFKNSILILNTPTT
EECCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCHHHCCEEEEECCCC
KSGLILSQIGLLEYKPFKILSTQINFNPSLLLLTQPKDRKDLFIVNALQNSDETLIEYAS
CCCHHHHHHCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHH
LLESDLRHDWVNYSSAIGLEVFLNTLDPHFKKSFQESLEDNQVRYHNQIYQALGYSFEPI
HHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC
KNESGTKKE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA