Definition Helicobacter pylori HPAG1 chromosome, complete genome.
Accession NC_008086
Length 1,596,366

Click here to switch to the map view.

The map label for this gene is 108563191

Identifier: 108563191

GI number: 108563191

Start: 802875

End: 803060

Strand: Direct

Name: 108563191

Synonym: HPAG1_0766

Alternate gene names: NA

Gene position: 802875-803060 (Clockwise)

Preceding gene: 108563190

Following gene: 108563192

Centisome position: 50.29

GC content: 35.48

Gene sequence:

>186_bases
TTGAAGAAATTAAAGTTGGGGGGTTTGTTTCTCGCTTTGTGCCCTTATAATAGGGATTTTATAGGGTTTGAGTGTTTAAA
AGTGCATTTAATCCCACACGCCTTGAAAAAAGCCCTCTTGTTGGGTTGTAGGGGTAAAATCAGTCCCCTTGTTAGGGTTA
ATTATTCTATAATAATAAAATTTTAG

Upstream 100 bases:

>100_bases
GCTTAAGGCCTTATATCTATAATTGGCGCTAGGGGATAATCAAAAACATGAAAGCATGCGCCATTCAATGATGCAATCCT
TTAATGGTTGAAAAATATGG

Downstream 100 bases:

>100_bases
GAAATTCAGTTTAAAAGATATTAAAAAATGCCATACGCCTTAAGAAAAAGATTTTTCAAACGCTTTGCGCTGATTGTTTC
CACTTTTTGTGCGATAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 61

Protein sequence:

>61_residues
MKKLKLGGLFLALCPYNRDFIGFECLKVHLIPHALKKALLLGCRGKISPLVRVNYSIIIKF

Sequences:

>Translated_61_residues
MKKLKLGGLFLALCPYNRDFIGFECLKVHLIPHALKKALLLGCRGKISPLVRVNYSIIIKF
>Mature_61_residues
MKKLKLGGLFLALCPYNRDFIGFECLKVHLIPHALKKALLLGCRGKISPLVRVNYSIIIKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6913; Mature: 6913

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLKLGGLFLALCPYNRDFIGFECLKVHLIPHALKKALLLGCRGKISPLVRVNYSIIIK
CCCCCCCCEEEEECCCCCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEEEEEE
F
C
>Mature Secondary Structure
MKKLKLGGLFLALCPYNRDFIGFECLKVHLIPHALKKALLLGCRGKISPLVRVNYSIIIK
CCCCCCCCEEEEECCCCCCCCCEEEEEEEECHHHHHHHHHHCCCCCCCEEEEEEEEEEEE
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA