Definition | Helicobacter pylori HPAG1 chromosome, complete genome. |
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Accession | NC_008086 |
Length | 1,596,366 |
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The map label for this gene is 108562740
Identifier: 108562740
GI number: 108562740
Start: 327010
End: 327396
Strand: Direct
Name: 108562740
Synonym: HPAG1_0315
Alternate gene names: NA
Gene position: 327010-327396 (Clockwise)
Preceding gene: 108562737
Following gene: 108562741
Centisome position: 20.48
GC content: 42.12
Gene sequence:
>387_bases ATGTGCGTTTTATGCGGGGAGCTTATCAGTTCTTTTCATTGGACCGATGAAAATTATAGGGGCGATAAGAGCGATAGTTA TGAGATTGATGAAAATTTGAAAGAGCCAAATGCGCTTATTAGCGCTAATGAAAACGCCAGGGAACGCAAAAGAGCGCGGC TCAAGCGAGTGGGATTGCTCAATCAAATCTTGGCGTTTTATGGGCTAAAAATTAATGATTGGCAAGGCGCAAAGTTTGTG TTGCACGATAAAAAAGGGCAGAGCGTGATCGTGAATGATTTAGGCGATTTGTGGGATAAGGCGCAAAACTTAGCCAAAAA AAAGATGGACGCGCTAGATTCTAATTTATTAGCGTTTTTAAACCAACAGACACACGCCACTCACTGA
Upstream 100 bases:
>100_bases CTGCATTAAATTTCCTATAATAAATAATTAAACAGCACTAGATTTATTCTTGTTTTTTTCAGTAAAATTGTAGCATGATT TAGGTTTAAAAGGTTGAAAG
Downstream 100 bases:
>100_bases TGCCCAAAATCCCTATCACGCTCATCACCGGTTTTTTAGGCAGCGGTAAAACGAGTTTTTTAAGCGAATATTTAAACCAA ATAGATCACCAAGGCGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MCVLCGELISSFHWTDENYRGDKSDSYEIDENLKEPNALISANENARERKRARLKRVGLLNQILAFYGLKINDWQGAKFV LHDKKGQSVIVNDLGDLWDKAQNLAKKKMDALDSNLLAFLNQQTHATH
Sequences:
>Translated_128_residues MCVLCGELISSFHWTDENYRGDKSDSYEIDENLKEPNALISANENARERKRARLKRVGLLNQILAFYGLKINDWQGAKFV LHDKKGQSVIVNDLGDLWDKAQNLAKKKMDALDSNLLAFLNQQTHATH >Mature_128_residues MCVLCGELISSFHWTDENYRGDKSDSYEIDENLKEPNALISANENARERKRARLKRVGLLNQILAFYGLKINDWQGAKFV LHDKKGQSVIVNDLGDLWDKAQNLAKKKMDALDSNLLAFLNQQTHATH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14631; Mature: 14631
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCVLCGELISSFHWTDENYRGDKSDSYEIDENLKEPNALISANENARERKRARLKRVGLL CEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHHHHH NQILAFYGLKINDWQGAKFVLHDKKGQSVIVNDLGDLWDKAQNLAKKKMDALDSNLLAFL HHHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQQTHATH HHHHCCCC >Mature Secondary Structure MCVLCGELISSFHWTDENYRGDKSDSYEIDENLKEPNALISANENARERKRARLKRVGLL CEEEHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCEEECCCCHHHHHHHHHHHHHHH NQILAFYGLKINDWQGAKFVLHDKKGQSVIVNDLGDLWDKAQNLAKKKMDALDSNLLAFL HHHHHHHCCCCCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NQQTHATH HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA