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The map label for this gene is yjiA [H]

Identifier: 108562741

GI number: 108562741

Start: 327396

End: 328361

Strand: Direct

Name: yjiA [H]

Synonym: HPAG1_0316

Alternate gene names: 108562741

Gene position: 327396-328361 (Clockwise)

Preceding gene: 108562740

Following gene: 108562751

Centisome position: 20.51

GC content: 41.72

Gene sequence:

>966_bases
ATGCCCAAAATCCCTATCACGCTCATCACCGGTTTTTTAGGCAGCGGTAAAACGAGTTTTTTAAGCGAATATTTAAACCA
AATAGATCACCAAGGCGTTGCGCTTATCATCAATGAAATCGGTCAAGTCGCCTTGGATCAGCGCATCTTAAGCGTTCAAT
ATTGCGGTGAAAAAATGCTCTATCTTAACGCAGGGTGCGTGTGTTGCAACAAACGCTTAGATTTAGTGGAGTCTCTAAAA
GCCGCGCTCAATAACTATGAATGGCGCGGCGAAATTTTAAAGCGCATCATCATTGAAACCACCGGTTTAGCCAACCCGGC
GCCGATTTTATGGACGATTTTGAGCGATGTTTTTTTAGGGGTGCATTTTGAAATTCAAAGCGTGGTGGCTTGCGTGGATG
CGCTGAATGCTAGAGAGCATTTAACCAACAATGAAGCTAAAGAGCAAATCGTTTTTGCTGATAGCGTTTTATTGACCAAA
ACGGATTTGCAAAATGATAGTGCGGCTTTAATGAAATTAAAAGAGTGCTTGCAAGCCATTAACCCTAGCGCGGAAATTTT
TGACAAGAGAGCGATAGACTATGAGAGCCTCTTTTCACGCAAAAATAGGGTGCGAAATTTTATGCCAAGAATGCCAAAAG
ATTCGCACTCGCAGGGCTTTGAAACTTTAAGCATTAATTTTGAAGGGGCGATGGAATGGAGCGCGTTTGGGATTTGGCTG
AGTTTGTTATTGCATCAATACGGCACACAGATTTTACGCATCAAGGGGATTATTGACACTGGAAGCGGCTTTTTGGTGAG
TATTAACGGCGTGATGCATGTCATTTACCCGCCTAAACATATTTTAAAGGATCAAAACGGCTCTAACCTCGTTTTTATCA
TGCGTCATTTAGAGCGTGAAAAAATCTTAAATTCCTTAAAGGGTTTTAAGGATTTTCTCGGCATTAAGGGTTTTGAAACC
CCATAA

Upstream 100 bases:

>100_bases
ATTTGTGGGATAAGGCGCAAAACTTAGCCAAAAAAAAGATGGACGCGCTAGATTCTAATTTATTAGCGTTTTTAAACCAA
CAGACACACGCCACTCACTG

Downstream 100 bases:

>100_bases
TTTTTCTATTTATTGGTAGCTGTTTGCATTTTAATGGGGAAAAGAACGATGAAGCTTAAAACCAAACACACCCCACAAAT
GACAAAAATCAAAACATAGC

Product: ATP/GTP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MPKIPITLITGFLGSGKTSFLSEYLNQIDHQGVALIINEIGQVALDQRILSVQYCGEKMLYLNAGCVCCNKRLDLVESLK
AALNNYEWRGEILKRIIIETTGLANPAPILWTILSDVFLGVHFEIQSVVACVDALNAREHLTNNEAKEQIVFADSVLLTK
TDLQNDSAALMKLKECLQAINPSAEIFDKRAIDYESLFSRKNRVRNFMPRMPKDSHSQGFETLSINFEGAMEWSAFGIWL
SLLLHQYGTQILRIKGIIDTGSGFLVSINGVMHVIYPPKHILKDQNGSNLVFIMRHLEREKILNSLKGFKDFLGIKGFET
P

Sequences:

>Translated_321_residues
MPKIPITLITGFLGSGKTSFLSEYLNQIDHQGVALIINEIGQVALDQRILSVQYCGEKMLYLNAGCVCCNKRLDLVESLK
AALNNYEWRGEILKRIIIETTGLANPAPILWTILSDVFLGVHFEIQSVVACVDALNAREHLTNNEAKEQIVFADSVLLTK
TDLQNDSAALMKLKECLQAINPSAEIFDKRAIDYESLFSRKNRVRNFMPRMPKDSHSQGFETLSINFEGAMEWSAFGIWL
SLLLHQYGTQILRIKGIIDTGSGFLVSINGVMHVIYPPKHILKDQNGSNLVFIMRHLEREKILNSLKGFKDFLGIKGFET
P
>Mature_320_residues
PKIPITLITGFLGSGKTSFLSEYLNQIDHQGVALIINEIGQVALDQRILSVQYCGEKMLYLNAGCVCCNKRLDLVESLKA
ALNNYEWRGEILKRIIIETTGLANPAPILWTILSDVFLGVHFEIQSVVACVDALNAREHLTNNEAKEQIVFADSVLLTKT
DLQNDSAALMKLKECLQAINPSAEIFDKRAIDYESLFSRKNRVRNFMPRMPKDSHSQGFETLSINFEGAMEWSAFGIWLS
LLLHQYGTQILRIKGIIDTGSGFLVSINGVMHVIYPPKHILKDQNGSNLVFIMRHLEREKILNSLKGFKDFLGIKGFETP

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI223941779, Length=321, Percent_Identity=27.4143302180685, Blast_Score=106, Evalue=3e-23,
Organism=Homo sapiens, GI126722884, Length=334, Percent_Identity=26.9461077844311, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI148727351, Length=334, Percent_Identity=27.2455089820359, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI146231952, Length=334, Percent_Identity=27.2455089820359, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI33469141, Length=334, Percent_Identity=26.6467065868263, Blast_Score=102, Evalue=6e-22,
Organism=Homo sapiens, GI223941776, Length=323, Percent_Identity=25.3869969040248, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI119120938, Length=143, Percent_Identity=34.965034965035, Blast_Score=82, Evalue=5e-16,
Organism=Escherichia coli, GI87082430, Length=324, Percent_Identity=29.6296296296296, Blast_Score=107, Evalue=7e-25,
Organism=Escherichia coli, GI1788499, Length=158, Percent_Identity=29.746835443038, Blast_Score=62, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6324356, Length=207, Percent_Identity=25.6038647342995, Blast_Score=75, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 36086; Mature: 35955

Theoretical pI: Translated: 7.20; Mature: 7.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIPITLITGFLGSGKTSFLSEYLNQIDHQGVALIINEIGQVALDQRILSVQYCGEKML
CCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
YLNAGCVCCNKRLDLVESLKAALNNYEWRGEILKRIIIETTGLANPAPILWTILSDVFLG
EEECCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VHFEIQSVVACVDALNAREHLTNNEAKEQIVFADSVLLTKTDLQNDSAALMKLKECLQAI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHHHHH
NPSAEIFDKRAIDYESLFSRKNRVRNFMPRMPKDSHSQGFETLSINFEGAMEWSAFGIWL
CCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
SLLLHQYGTQILRIKGIIDTGSGFLVSINGVMHVIYPPKHILKDQNGSNLVFIMRHLERE
HHHHHHHCCEEEEEEEEEECCCCEEEEECCEEEEEECCHHHHCCCCCCCEEHHHHHHHHH
KILNSLKGFKDFLGIKGFETP
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
PKIPITLITGFLGSGKTSFLSEYLNQIDHQGVALIINEIGQVALDQRILSVQYCGEKML
CCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEE
YLNAGCVCCNKRLDLVESLKAALNNYEWRGEILKRIIIETTGLANPAPILWTILSDVFLG
EEECCEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
VHFEIQSVVACVDALNAREHLTNNEAKEQIVFADSVLLTKTDLQNDSAALMKLKECLQAI
HHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEECCEEEEECCCCCCHHHHHHHHHHHHHH
NPSAEIFDKRAIDYESLFSRKNRVRNFMPRMPKDSHSQGFETLSINFEGAMEWSAFGIWL
CCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
SLLLHQYGTQILRIKGIIDTGSGFLVSINGVMHVIYPPKHILKDQNGSNLVFIMRHLERE
HHHHHHHCCEEEEEEEEEECCCCEEEEECCEEEEEECCHHHHCCCCCCCEEHHHHHHHHH
KILNSLKGFKDFLGIKGFETP
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]