Click here to switch to the map view.

The map label for this gene is 108562737

Identifier: 108562737

GI number: 108562737

Start: 324168

End: 325049

Strand: Direct

Name: 108562737

Synonym: HPAG1_0312

Alternate gene names: NA

Gene position: 324168-325049 (Clockwise)

Preceding gene: 108562736

Following gene: 108562740

Centisome position: 20.31

GC content: 45.12

Gene sequence:

>882_bases
ATGGCAAAAGAAATTTTAGTGGCTTATGGCGTGGATATTGATGCGGTGGCTGGTTGGCTAGGGAGCTATGGTGGGGAGGA
TTCGCCTGATGATATTTCGCGCGGGCTTTTTGCGGGTGAAGTGGGGATCCCACGGCTTTTGAAATTGTTTAAAAAATACC
ATCTCCCTGCGACTTGGTTTGTGCCTGGGCATTCTATTGAAACTTTCCCTGAGCAAATGAAAATGATCGTGGATGCAGGG
CATGAAGTGGGTGCGCATGGGTATTCGCATGAAAACCCTATCGCTATGAGCGCTAAGCAAGAAGAAGATGTTTTGTTAAA
AAGCATTGAATTGATTAAAGATCTCACCGGCAAAGCCCCCACAGGCTATGTGGCACCGTGGTGGGAGTTTTCTAATATCA
CTAATGAATTGCTTTTAAAACACGGCTTCAAATACGACCACTCGCTCATGCACAATGATTTCACGCCTTATTATGTGCGC
GTGGGGGATAGTTGGAGCAAGATTGATTATAGTTTGGAAGCCAAGGACTGGATGAAGCCTTTGATTCGTGGGGTGGAAAC
CGATCTGGTGGAAATCCCTGCGAACTGGTATTTGGACGATTTGCCACCGATGATGTTTATCAAAAAATCCCCCAATAGTT
TTGGTTTTGTAAGCCCGCACGATATAGGGCAAATGTGGATCGATCAATTTGATTGGGTTTATCGTGAGATGGATTATGCG
GTGTTTAGCATGACAATCCACCCTGATGTGAGCGCCCGTCCGCAAGTGTTGCTCATGCATGAAAAAATCATTGAGCATAT
CAACAAGCACGAGGGCGTGCGTTGGGTAACATTCAATGAAATCGCTGATGATTTCTTAAAACGAAACCCCAGAAAAAAAT
AG

Upstream 100 bases:

>100_bases
CGAAGCGGCACTGCAACGCCAAAAAATCCCTTATTTACAAGATTTTGACACCAAACTCACCAAAAAGGGGTTTGGAAAAC
TCACTTAAAAAGGAGCGATT

Downstream 100 bases:

>100_bases
CGGTTAAAATTGCATCTAAGTTAGTGTGGATTTAGTGGGATTCACACTGACTGCTACAAATAAACTTTCAATTCATTTTC
CATTAGTTTGATTGTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Family Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Domain Protein; Hydrolase; Polysaccharide Deacetylase Family; Saccharide Deacetylase Slightly; Cyclic Imide Hydrolase; Polysaccharide Deacetylase Domain-Containing Protein; Sporulation Protein Polysaccharide Deacetylase Family; Deacetylase; Urate Catabolism Protein

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFVPGHSIETFPEQMKMIVDAG
HEVGAHGYSHENPIAMSAKQEEDVLLKSIELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYYVR
VGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIGQMWIDQFDWVYREMDYA
VFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRNPRKK

Sequences:

>Translated_293_residues
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFVPGHSIETFPEQMKMIVDAG
HEVGAHGYSHENPIAMSAKQEEDVLLKSIELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYYVR
VGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIGQMWIDQFDWVYREMDYA
VFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRNPRKK
>Mature_292_residues
AKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWFVPGHSIETFPEQMKMIVDAGH
EVGAHGYSHENPIAMSAKQEEDVLLKSIELIKDLTGKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYYVRV
GDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIGQMWIDQFDWVYREMDYAV
FSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRNPRKK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33700; Mature: 33569

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWF
CCCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE
VPGHSIETFPEQMKMIVDAGHEVGAHGYSHENPIAMSAKQEEDVLLKSIELIKDLTGKAP
ECCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC
TGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYYVRVGDSWSKIDYSLEAKDWMKP
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCHHHEEEEECHHHHHHH
LIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIGQMWIDQFDWVYREMDYA
HHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCEE
VFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRNPRKK
EEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFKKYHLPATWF
CCCEEEEECCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCEEEE
VPGHSIETFPEQMKMIVDAGHEVGAHGYSHENPIAMSAKQEEDVLLKSIELIKDLTGKAP
ECCCCHHHHHHHHHHHHHCCCHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCC
TGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYYVRVGDSWSKIDYSLEAKDWMKP
CCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCHHHEEEEECHHHHHHH
LIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIGQMWIDQFDWVYREMDYA
HHHCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCEE
VFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRNPRKK
EEEEEECCCCCCCCCEEHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA