| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
Click here to switch to the map view.
The map label for this gene is adk
Identifier: 103488274
GI number: 103488274
Start: 2961165
End: 2961824
Strand: Reverse
Name: adk
Synonym: Sala_2797
Alternate gene names: 103488274
Gene position: 2961824-2961165 (Counterclockwise)
Preceding gene: 103488275
Following gene: 103488273
Centisome position: 88.54
GC content: 65.15
Gene sequence:
>660_bases ATGACGCTCAATATCATTCTGCTCGGCCCGCCGGGGGCAGGCAAGGGAACGCAGGCATCGCGGCTCGAGGATGAGCATGG CATGGTCCAGCTGTCGACCGGCGACATGTTGCGCGCCGCGGTCAAGGCGGGAACCCCCATCGGGCTTCAGGCCAAGGCGG TGATGGACGCGGGCGAGCTGGTCTCGGACGCGATCGTGTCGGGGCTGATCGGCGAGCGGCTCGACGAACTCGGTCCCGAT GTTTCGGTGATCTTCGATGGCTATCCGCGCACCGCGGCACAGGCCGACGCGCTCGACGGCATTTTGTCGGCACGCGGGCG CACGCTCGACCATGTCATCGAACTCGTCGTCGATGAGGATGCGCTCGTCGATCGCATCACCGGCCGTTTCAGTTGCGCCC GGTGCGGCGAGGGCTATCACGACCGCTACAAGCTGCCCAAGGTCGCCGACATCTGCGATGTTTGCGGGTCGAAAGAGTTC AAACGCCGTCCCGACGACAATGAGGACACCGTGCGCACACGCATGGTCGAATATCGGGCGAAGACCGCGCCGATCCTGCC GATCTATGAAGCGCGGGGCATCGTCACCCGGGTCGATGGCATGGCGCCGATCGACCGGGTCAACGACGCGATCGAAACGA TCCTCGGCACCGCTGGCTAG
Upstream 100 bases:
>100_bases ATGGCGACCTGATCAAGAAGGCGAAATTGAAGGGTGGCGTTGCGCGGCGCTGACGGCTTCGTTAGGGCAGGCGGCAACAC GCAGGGGACAGGGGCCTTTC
Downstream 100 bases:
>100_bases CCAGCCCTGCCGCTGCCCGTTATTGAGGGGGCAAGGGGGGAAATGCTTGATGGCAATTTCGGGATATTTTGCAGGTGTCG CCGCATTGGCCGCGCTTGCG
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTLNIILLGPPGAGKGTQASRLEDEHGMVQLSTGDMLRAAVKAGTPIGLQAKAVMDAGELVSDAIVSGLIGERLDELGPD VSVIFDGYPRTAAQADALDGILSARGRTLDHVIELVVDEDALVDRITGRFSCARCGEGYHDRYKLPKVADICDVCGSKEF KRRPDDNEDTVRTRMVEYRAKTAPILPIYEARGIVTRVDGMAPIDRVNDAIETILGTAG
Sequences:
>Translated_219_residues MTLNIILLGPPGAGKGTQASRLEDEHGMVQLSTGDMLRAAVKAGTPIGLQAKAVMDAGELVSDAIVSGLIGERLDELGPD VSVIFDGYPRTAAQADALDGILSARGRTLDHVIELVVDEDALVDRITGRFSCARCGEGYHDRYKLPKVADICDVCGSKEF KRRPDDNEDTVRTRMVEYRAKTAPILPIYEARGIVTRVDGMAPIDRVNDAIETILGTAG >Mature_218_residues TLNIILLGPPGAGKGTQASRLEDEHGMVQLSTGDMLRAAVKAGTPIGLQAKAVMDAGELVSDAIVSGLIGERLDELGPDV SVIFDGYPRTAAQADALDGILSARGRTLDHVIELVVDEDALVDRITGRFSCARCGEGYHDRYKLPKVADICDVCGSKEFK RRPDDNEDTVRTRMVEYRAKTAPILPIYEARGIVTRVDGMAPIDRVNDAIETILGTAG
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family
Homologues:
Organism=Homo sapiens, GI7524346, Length=206, Percent_Identity=41.747572815534, Blast_Score=159, Evalue=1e-39, Organism=Homo sapiens, GI4502013, Length=206, Percent_Identity=41.747572815534, Blast_Score=159, Evalue=2e-39, Organism=Homo sapiens, GI19923437, Length=198, Percent_Identity=35.3535353535354, Blast_Score=119, Evalue=1e-27, Organism=Homo sapiens, GI310110345, Length=198, Percent_Identity=32.8282828282828, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI53832003, Length=198, Percent_Identity=32.8282828282828, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI8051579, Length=198, Percent_Identity=32.8282828282828, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI53832001, Length=198, Percent_Identity=32.8282828282828, Blast_Score=111, Evalue=6e-25, Organism=Homo sapiens, GI4502011, Length=214, Percent_Identity=27.5700934579439, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI22749187, Length=190, Percent_Identity=27.3684210526316, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI28144899, Length=197, Percent_Identity=26.3959390862944, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI28144897, Length=197, Percent_Identity=26.3959390862944, Blast_Score=67, Evalue=1e-11, Organism=Escherichia coli, GI1786680, Length=219, Percent_Identity=46.1187214611872, Blast_Score=170, Evalue=6e-44, Organism=Caenorhabditis elegans, GI17552384, Length=214, Percent_Identity=41.588785046729, Blast_Score=168, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17567503, Length=206, Percent_Identity=29.126213592233, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17537943, Length=199, Percent_Identity=29.1457286432161, Blast_Score=81, Evalue=4e-16, Organism=Caenorhabditis elegans, GI17550688, Length=217, Percent_Identity=25.8064516129032, Blast_Score=71, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6320432, Length=203, Percent_Identity=41.871921182266, Blast_Score=158, Evalue=6e-40, Organism=Saccharomyces cerevisiae, GI6321018, Length=196, Percent_Identity=35.7142857142857, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI22026816, Length=213, Percent_Identity=41.7840375586854, Blast_Score=164, Evalue=5e-41, Organism=Drosophila melanogaster, GI17737899, Length=195, Percent_Identity=37.4358974358974, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI24645822, Length=195, Percent_Identity=37.4358974358974, Blast_Score=117, Evalue=5e-27, Organism=Drosophila melanogaster, GI17647141, Length=197, Percent_Identity=30.9644670050761, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI24663208, Length=197, Percent_Identity=30.9644670050761, Blast_Score=92, Evalue=3e-19, Organism=Drosophila melanogaster, GI221459597, Length=218, Percent_Identity=28.8990825688073, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356893, Length=218, Percent_Identity=28.8990825688073, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): KAD_SPHAL (Q1GPC0)
Other databases:
- EMBL: CP000356 - RefSeq: YP_617835.1 - ProteinModelPortal: Q1GPC0 - SMR: Q1GPC0 - GeneID: 4080378 - GenomeReviews: CP000356_GR - KEGG: sal:Sala_2797 - NMPDR: fig|317655.9.peg.2662 - HOGENOM: HBG630208 - OMA: CGEGYHD - ProtClustDB: PRK00279 - BioCyc: SALA317655:SALA_2797-MONOMER - BRENDA: 2.7.4.3 - GO: GO:0005737 - HAMAP: MF_00235 - InterPro: IPR006259 - InterPro: IPR000850 - InterPro: IPR007862 - PANTHER: PTHR23359 - PRINTS: PR00094 - TIGRFAMs: TIGR01351
Pfam domain/function: PF00406 ADK; PF05191 ADK_lid; SSF57774 Adenylate_kinase_Znf_lid
EC number: =2.7.4.3
Molecular weight: Translated: 23463; Mature: 23332
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNIILLGPPGAGKGTQASRLEDEHGMVQLSTGDMLRAAVKAGTPIGLQAKAVMDAGEL CEEEEEEECCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHH VSDAIVSGLIGERLDELGPDVSVIFDGYPRTAAQADALDGILSARGRTLDHVIELVVDED HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCH ALVDRITGRFSCARCGEGYHDRYKLPKVADICDVCGSKEFKRRPDDNEDTVRTRMVEYRA HHHHHHHCCHHHHHCCCCCCHHCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHH KTAPILPIYEARGIVTRVDGMAPIDRVNDAIETILGTAG CCCCCCEEHHCCCCEEECCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TLNIILLGPPGAGKGTQASRLEDEHGMVQLSTGDMLRAAVKAGTPIGLQAKAVMDAGEL EEEEEEECCCCCCCCCCHHHCCCCCCEEEECCCHHHHHHHHCCCCCCCCHHHHHHHHHH VSDAIVSGLIGERLDELGPDVSVIFDGYPRTAAQADALDGILSARGRTLDHVIELVVDED HHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCH ALVDRITGRFSCARCGEGYHDRYKLPKVADICDVCGSKEFKRRPDDNEDTVRTRMVEYRA HHHHHHHCCHHHHHCCCCCCHHCCCCHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHH KTAPILPIYEARGIVTRVDGMAPIDRVNDAIETILGTAG CCCCCCEEHHCCCCEEECCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA