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The map label for this gene is secY [H]

Identifier: 103488275

GI number: 103488275

Start: 2961872

End: 2963245

Strand: Reverse

Name: secY [H]

Synonym: Sala_2798

Alternate gene names: 103488275

Gene position: 2963245-2961872 (Counterclockwise)

Preceding gene: 103488276

Following gene: 103488274

Centisome position: 88.58

GC content: 62.37

Gene sequence:

>1374_bases
ATGGCCTCTCGCGCCGACCAGCTTGCTTCCAACCTCAATTTCTCGAAATTCGGTCAGGCGACCGAACTCAAGAACCGCAT
CTGGTTCACGATCGGCGCGCTGATCGTCTTTCGCTTCCTGTCGTTCGTGCCGCTTCCGGGCGTCGACCCCGTCGCACTGG
CGAACCTCTATTCGCAGGCCGCCTCGGGCGGCGTGCTCGACATCTTCAACACCTTCTCGGGCGGCAGCCTCGAGCGCATG
AGCATCATCGCGCTCGGCGTCATGCCCTATATCACCGCGTCGATCGTCGTGCAGCTCGCCGCGGCGCTTTCGCCCAGCCT
TGCCGCTCTCAAGAAAGAGGGCGAAAGCGGGCGCAAGAAGCTCAACCAATATACGCGCTACGGCACCGTCGTGCTCACCG
CGGTCCAGGGCTATTTCATCGCCGTCGGTCTCGAAACGCTCGGTGCGTCGCAGGGGATCGCCGCGGTCGTCGATCCCGGC
ATGATGTTCCGCATCGGCGCCGTCATCTCGATCGTCGGCGGCACGCTGTTCCTGATGTGGCTCGGCGAACAGATCACCAG
CCGCGGTATCGGCAACGGCGTCTCGCTCATCATCATGGCGGGCATTCTCGCGCAGCTTCCGCGCAGTTTCGCGCAGATGT
TCACGCAGGTGCGCGAAGGGTCGATGGGCGGCGGCACCGTCGTCGCGGTGATCGTCGGCGGCATCGCCATCATCGCCTTC
ATCAGCTTCATGGAGCGGGCGCAGCGCCGCGTCCTCGTCCAGTATCCGAAGCGCGCGACGCAGCGCGGGGTGATGCAGGC
CGATCGCAGCCACCTGCCATTGAAGGTCAACACCGCGGGCGTCATCCCGCCTATCTTTGCCTCGTCGCTGCTGCTCATGC
CGCTCACCGTCACGCAGATGATGGGCAATAATGTCCAGGGCGATACCGCGTGGGGCGATTTCCTGATCACGCTCAATCAA
TATCTCGCGCACGGCCAGCCGCTCTATATGGCGCTCTATGCCGCAGGCATCATCTTCTTCTGCTTCTTTTACGTCGCGGT
CGTCTTCAACCCCGAAGAAACCGCCGAGAATCTGAAGAAGCAGAACGGCTTCATCCCCGGCATCCGTCCGGGCAAGAACA
CCGCCACCTACCTCGACTTCGTGCTGACGCGCATCACGGTGATCGGCGCGGCCTATCTCGCGGTCATCTGTCTGGTGCCG
GAGTATTTCATCGCCCAGTCGGGGCTGCCTTTCTACCTCGGCGGCACCAGCCTGCTGATCATCGTCAATGTGACGATCGA
CACGATCAGCCAGATCCAGAGCCACATGCTCGCGCATCAATATGGCGACCTGATCAAGAAGGCGAAATTGAAGGGTGGCG
TTGCGCGGCGCTGA

Upstream 100 bases:

>100_bases
TCTGTAAATAGGCCTTTCCCCTTGCGCTTCGCGATCGGCGAACGCACATAGGCGCCGGGTCGCGGGGGGCGCGGCCCGGA
TATCCTCGAGGAAAACACCC

Downstream 100 bases:

>100_bases
CGGCTTCGTTAGGGCAGGCGGCAACACGCAGGGGACAGGGGCCTTTCATGACGCTCAATATCATTCTGCTCGGCCCGCCG
GGGGCAGGCAAGGGAACGCA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MASRADQLASNLNFSKFGQATELKNRIWFTIGALIVFRFLSFVPLPGVDPVALANLYSQAASGGVLDIFNTFSGGSLERM
SIIALGVMPYITASIVVQLAAALSPSLAALKKEGESGRKKLNQYTRYGTVVLTAVQGYFIAVGLETLGASQGIAAVVDPG
MMFRIGAVISIVGGTLFLMWLGEQITSRGIGNGVSLIIMAGILAQLPRSFAQMFTQVREGSMGGGTVVAVIVGGIAIIAF
ISFMERAQRRVLVQYPKRATQRGVMQADRSHLPLKVNTAGVIPPIFASSLLLMPLTVTQMMGNNVQGDTAWGDFLITLNQ
YLAHGQPLYMALYAAGIIFFCFFYVAVVFNPEETAENLKKQNGFIPGIRPGKNTATYLDFVLTRITVIGAAYLAVICLVP
EYFIAQSGLPFYLGGTSLLIIVNVTIDTISQIQSHMLAHQYGDLIKKAKLKGGVARR

Sequences:

>Translated_457_residues
MASRADQLASNLNFSKFGQATELKNRIWFTIGALIVFRFLSFVPLPGVDPVALANLYSQAASGGVLDIFNTFSGGSLERM
SIIALGVMPYITASIVVQLAAALSPSLAALKKEGESGRKKLNQYTRYGTVVLTAVQGYFIAVGLETLGASQGIAAVVDPG
MMFRIGAVISIVGGTLFLMWLGEQITSRGIGNGVSLIIMAGILAQLPRSFAQMFTQVREGSMGGGTVVAVIVGGIAIIAF
ISFMERAQRRVLVQYPKRATQRGVMQADRSHLPLKVNTAGVIPPIFASSLLLMPLTVTQMMGNNVQGDTAWGDFLITLNQ
YLAHGQPLYMALYAAGIIFFCFFYVAVVFNPEETAENLKKQNGFIPGIRPGKNTATYLDFVLTRITVIGAAYLAVICLVP
EYFIAQSGLPFYLGGTSLLIIVNVTIDTISQIQSHMLAHQYGDLIKKAKLKGGVARR
>Mature_456_residues
ASRADQLASNLNFSKFGQATELKNRIWFTIGALIVFRFLSFVPLPGVDPVALANLYSQAASGGVLDIFNTFSGGSLERMS
IIALGVMPYITASIVVQLAAALSPSLAALKKEGESGRKKLNQYTRYGTVVLTAVQGYFIAVGLETLGASQGIAAVVDPGM
MFRIGAVISIVGGTLFLMWLGEQITSRGIGNGVSLIIMAGILAQLPRSFAQMFTQVREGSMGGGTVVAVIVGGIAIIAFI
SFMERAQRRVLVQYPKRATQRGVMQADRSHLPLKVNTAGVIPPIFASSLLLMPLTVTQMMGNNVQGDTAWGDFLITLNQY
LAHGQPLYMALYAAGIIFFCFFYVAVVFNPEETAENLKKQNGFIPGIRPGKNTATYLDFVLTRITVIGAAYLAVICLVPE
YFIAQSGLPFYLGGTSLLIIVNVTIDTISQIQSHMLAHQYGDLIKKAKLKGGVARR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=431, Percent_Identity=54.0603248259861, Blast_Score=429, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 49112; Mature: 48980

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASRADQLASNLNFSKFGQATELKNRIWFTIGALIVFRFLSFVPLPGVDPVALANLYSQA
CCCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ASGGVLDIFNTFSGGSLERMSIIALGVMPYITASIVVQLAAALSPSLAALKKEGESGRKK
CCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHH
LNQYTRYGTVVLTAVQGYFIAVGLETLGASQGIAAVVDPGMMFRIGAVISIVGGTLFLMW
HHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGEQITSRGIGNGVSLIIMAGILAQLPRSFAQMFTQVREGSMGGGTVVAVIVGGIAIIAF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ISFMERAQRRVLVQYPKRATQRGVMQADRSHLPLKVNTAGVIPPIFASSLLLMPLTVTQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
MGNNVQGDTAWGDFLITLNQYLAHGQPLYMALYAAGIIFFCFFYVAVVFNPEETAENLKK
HCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
QNGFIPGIRPGKNTATYLDFVLTRITVIGAAYLAVICLVPEYFIAQSGLPFYLGGTSLLI
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEE
IVNVTIDTISQIQSHMLAHQYGDLIKKAKLKGGVARR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASRADQLASNLNFSKFGQATELKNRIWFTIGALIVFRFLSFVPLPGVDPVALANLYSQA
CCCHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
ASGGVLDIFNTFSGGSLERMSIIALGVMPYITASIVVQLAAALSPSLAALKKEGESGRKK
CCCCEEEHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHHH
LNQYTRYGTVVLTAVQGYFIAVGLETLGASQGIAAVVDPGMMFRIGAVISIVGGTLFLMW
HHHHHHHHHHHHHHHHHHHEEEEHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHH
LGEQITSRGIGNGVSLIIMAGILAQLPRSFAQMFTQVREGSMGGGTVVAVIVGGIAIIAF
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
ISFMERAQRRVLVQYPKRATQRGVMQADRSHLPLKVNTAGVIPPIFASSLLLMPLTVTQM
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHH
MGNNVQGDTAWGDFLITLNQYLAHGQPLYMALYAAGIIFFCFFYVAVVFNPEETAENLKK
HCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
QNGFIPGIRPGKNTATYLDFVLTRITVIGAAYLAVICLVPEYFIAQSGLPFYLGGTSLLI
HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCEEEE
IVNVTIDTISQIQSHMLAHQYGDLIKKAKLKGGVARR
EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]