Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488273

Identifier: 103488273

GI number: 103488273

Start: 2960411

End: 2961115

Strand: Reverse

Name: 103488273

Synonym: Sala_2796

Alternate gene names: NA

Gene position: 2961115-2960411 (Counterclockwise)

Preceding gene: 103488274

Following gene: 103488270

Centisome position: 88.52

GC content: 68.51

Gene sequence:

>705_bases
ATGGCAATTTCGGGATATTTTGCAGGTGTCGCCGCATTGGCCGCGCTTGCGTTCGCGCCCGCGACCAACGCCAAGGTCAT
CGACCAGAGCGAAACCGGCTTCACCGTCGCGCACACGGCGCAGGTCGCCGCGGCGCCCGCCGATGTGTGGAAGATGCTGC
GGATGCCGCAGAGCTGGTGGTCAAAGGATCATAGCTGGTCGGGCGATGCGGCGAACTTCTGGCTCGACTCGCAGGCCGGG
GGCTGCTTCTGTGAAAAATTGCCGGACGCCGACGCCGGGCTCGGCAGCGTCCAGCACGCGCGCATCCTTTTTGCGCGGCC
GAACGAGCTGCTCCGCCTCTCGGGCGCCTTTGGCCCGCTGCAGGGCGAGGCGCTGAACGCCACGCTGACGATCCAGATCA
AGGAAACCCCGACGGGCAGCGCGCTGCGCTTCGACTATGTCGTCGGGGGCTATATGCGCTTCAAGGTCGCCGACATCGCG
CCCGCGGTCGACCGGGTGATCGGCGAGCAGCTGCGCGGGCTGGCCGAGGCGCTCGGCGGCGCGCTGCCGCCGACACGCGA
CGAAAAGGCGGCGGAGGAGGCCGACGCGCCTGACGCCGAAGTCCCCGCGGCGAAGGATGAACCCGGCGATGAATCGGGCC
TCGACGCCGCGGTCGCCGATCTGGTTGAGGAAGACGCGAAGCCGAAGCCCGACAAGCGCCGTTAG

Upstream 100 bases:

>100_bases
ATCGACCGGGTCAACGACGCGATCGAAACGATCCTCGGCACCGCTGGCTAGCCAGCCCTGCCGCTGCCCGTTATTGAGGG
GGCAAGGGGGGAAATGCTTG

Downstream 100 bases:

>100_bases
CGATTACCGTTTGAAAGCGACCGTCGCCCCCCGCCTTCGCGGGGGGCGACGGTTTCTAACCGCCGGGTTTGCCGCGCAAT
TTGGCAAGCGCCGCGAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Polyketide Cyclase/Dehydrase

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MAISGYFAGVAALAALAFAPATNAKVIDQSETGFTVAHTAQVAAAPADVWKMLRMPQSWWSKDHSWSGDAANFWLDSQAG
GCFCEKLPDADAGLGSVQHARILFARPNELLRLSGAFGPLQGEALNATLTIQIKETPTGSALRFDYVVGGYMRFKVADIA
PAVDRVIGEQLRGLAEALGGALPPTRDEKAAEEADAPDAEVPAAKDEPGDESGLDAAVADLVEEDAKPKPDKRR

Sequences:

>Translated_234_residues
MAISGYFAGVAALAALAFAPATNAKVIDQSETGFTVAHTAQVAAAPADVWKMLRMPQSWWSKDHSWSGDAANFWLDSQAG
GCFCEKLPDADAGLGSVQHARILFARPNELLRLSGAFGPLQGEALNATLTIQIKETPTGSALRFDYVVGGYMRFKVADIA
PAVDRVIGEQLRGLAEALGGALPPTRDEKAAEEADAPDAEVPAAKDEPGDESGLDAAVADLVEEDAKPKPDKRR
>Mature_233_residues
AISGYFAGVAALAALAFAPATNAKVIDQSETGFTVAHTAQVAAAPADVWKMLRMPQSWWSKDHSWSGDAANFWLDSQAGG
CFCEKLPDADAGLGSVQHARILFARPNELLRLSGAFGPLQGEALNATLTIQIKETPTGSALRFDYVVGGYMRFKVADIAP
AVDRVIGEQLRGLAEALGGALPPTRDEKAAEEADAPDAEVPAAKDEPGDESGLDAAVADLVEEDAKPKPDKRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24675; Mature: 24544

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAISGYFAGVAALAALAFAPATNAKVIDQSETGFTVAHTAQVAAAPADVWKMLRMPQSWW
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHHHCCHHHHHHHHHCCHHHH
SKDHSWSGDAANFWLDSQAGGCFCEKLPDADAGLGSVQHARILFARPNELLRLSGAFGPL
CCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHHEEECCCCCCC
QGEALNATLTIQIKETPTGSALRFDYVVGGYMRFKVADIAPAVDRVIGEQLRGLAEALGG
CCCEECEEEEEEEEECCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
ALPPTRDEKAAEEADAPDAEVPAAKDEPGDESGLDAAVADLVEEDAKPKPDKRR
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AISGYFAGVAALAALAFAPATNAKVIDQSETGFTVAHTAQVAAAPADVWKMLRMPQSWW
CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEHHHHHCCHHHHHHHHHCCHHHH
SKDHSWSGDAANFWLDSQAGGCFCEKLPDADAGLGSVQHARILFARPNELLRLSGAFGPL
CCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCEEEEEEECCCHHEEECCCCCCC
QGEALNATLTIQIKETPTGSALRFDYVVGGYMRFKVADIAPAVDRVIGEQLRGLAEALGG
CCCEECEEEEEEEEECCCCCEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCC
ALPPTRDEKAAEEADAPDAEVPAAKDEPGDESGLDAAVADLVEEDAKPKPDKRR
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA