Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488189

Identifier: 103488189

GI number: 103488189

Start: 2859332

End: 2860153

Strand: Reverse

Name: 103488189

Synonym: Sala_2712

Alternate gene names: NA

Gene position: 2860153-2859332 (Counterclockwise)

Preceding gene: 103488190

Following gene: 103488188

Centisome position: 85.5

GC content: 70.44

Gene sequence:

>822_bases
ATGTCTCAGTTGAACATGAACAACCGGCAGAGCGGTCGCCGTCGCGGCCGCAACAACAATAACAACAATAATCGGTCGCA
GTCGGGTGGACGCGGAGGCGTCGACCAGGCGAACCGCATCGACAGCCGGGCGCGCGGCAATGGCGCGCAGATGATCGAGA
AATATCGCAACCTCGCGCGCGACGCCCAACTCGCCGGCGACCGCGTCCTCACCGAATATTATCTCCAGTTCGCCGACCAT
TATTTCCGCGTCGTCAGCGATTTCCGCGCGCGCCAGGAAGAAAAGGCGGCGGCGAGCGGGCAGGAGCGCAGCCACGACCG
CGGCCGCGAGATTCGCGGGGTCGAGGATTTCGACGGCCACGACGACACCGACGTCGACACCGACACCGGCGGCGACGATG
GCGACAATGGCGACGAGCGCAGCGCGCGGGACAATCGCGACAGCCGTGGCAATCGCGAATCGCGTGGCGATCGCGACGAC
GCGCGCGGCAACCGCCAGTCGTCGCGCGGGCGCTCGCGCGGCCGCGATGACGTCGAGGGTGGCGACGAGCGCGACGAGCA
GAAGGATGAGGCGCGCGATCAGGAAAGCGAAGCCGCTCCGCGTGCGGCGCGCCGCCCGACGCGGCGGCCGCGGCAGGAGA
GCAGGAGCGAGCGCGGCGATACGGCCGACGCCGGCATTGACACCGCCGCGCTGCCCCCGGCGATCGGACGCGGCGAGCGC
ACGGCCGAAGTCGGCGCCGACGACGAAGCCGCGGCGGTCAAGCCGCGGCGCACCCGCCGCACGCTCGCGGCGCGCAGCAC
CGACGTCGAGGCTGCCGAATAG

Upstream 100 bases:

>100_bases
AGGCGGTAAAGGGCAAGGCCGCGCACGAAAGCGCGGGCGCGACGCGCAAAGAGCGCGGTCGGCCAAAAGGGGTTGGCACA
GCTATTAGCTTATCGACAGG

Downstream 100 bases:

>100_bases
GGCTGTCTTTTCAAGCTGGCCTTTCGCCGGGACATGCCATAGCCTCTCCGCGCGATCGTCGCGGGGAGGCTTTTTTATGC
GTGCTTTGTCAGGGCTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MSQLNMNNRQSGRRRGRNNNNNNNRSQSGGRGGVDQANRIDSRARGNGAQMIEKYRNLARDAQLAGDRVLTEYYLQFADH
YFRVVSDFRARQEEKAAASGQERSHDRGREIRGVEDFDGHDDTDVDTDTGGDDGDNGDERSARDNRDSRGNRESRGDRDD
ARGNRQSSRGRSRGRDDVEGGDERDEQKDEARDQESEAAPRAARRPTRRPRQESRSERGDTADAGIDTAALPPAIGRGER
TAEVGADDEAAAVKPRRTRRTLAARSTDVEAAE

Sequences:

>Translated_273_residues
MSQLNMNNRQSGRRRGRNNNNNNNRSQSGGRGGVDQANRIDSRARGNGAQMIEKYRNLARDAQLAGDRVLTEYYLQFADH
YFRVVSDFRARQEEKAAASGQERSHDRGREIRGVEDFDGHDDTDVDTDTGGDDGDNGDERSARDNRDSRGNRESRGDRDD
ARGNRQSSRGRSRGRDDVEGGDERDEQKDEARDQESEAAPRAARRPTRRPRQESRSERGDTADAGIDTAALPPAIGRGER
TAEVGADDEAAAVKPRRTRRTLAARSTDVEAAE
>Mature_272_residues
SQLNMNNRQSGRRRGRNNNNNNNRSQSGGRGGVDQANRIDSRARGNGAQMIEKYRNLARDAQLAGDRVLTEYYLQFADHY
FRVVSDFRARQEEKAAASGQERSHDRGREIRGVEDFDGHDDTDVDTDTGGDDGDNGDERSARDNRDSRGNRESRGDRDDA
RGNRQSSRGRSRGRDDVEGGDERDEQKDEARDQESEAAPRAARRPTRRPRQESRSERGDTADAGIDTAALPPAIGRGERT
AEVGADDEAAAVKPRRTRRTLAARSTDVEAAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30401; Mature: 30270

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLNMNNRQSGRRRGRNNNNNNNRSQSGGRGGVDQANRIDSRARGNGAQMIEKYRNLAR
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
DAQLAGDRVLTEYYLQFADHYFRVVSDFRARQEEKAAASGQERSHDRGREIRGVEDFDGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
DDTDVDTDTGGDDGDNGDERSARDNRDSRGNRESRGDRDDARGNRQSSRGRSRGRDDVEG
CCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCC
GDERDEQKDEARDQESEAAPRAARRPTRRPRQESRSERGDTADAGIDTAALPPAIGRGER
CCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHCCCCHHHCCCCCCCCCC
TAEVGADDEAAAVKPRRTRRTLAARSTDVEAAE
HHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
SQLNMNNRQSGRRRGRNNNNNNNRSQSGGRGGVDQANRIDSRARGNGAQMIEKYRNLAR
CCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH
DAQLAGDRVLTEYYLQFADHYFRVVSDFRARQEEKAAASGQERSHDRGREIRGVEDFDGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCC
DDTDVDTDTGGDDGDNGDERSARDNRDSRGNRESRGDRDDARGNRQSSRGRSRGRDDVEG
CCCCCCCCCCCCCCCCCCHHHHHCCCHHCCCCCCCCCCHHHCCCHHHHHHHHCCCCCCCC
GDERDEQKDEARDQESEAAPRAARRPTRRPRQESRSERGDTADAGIDTAALPPAIGRGER
CCCHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCCCCHHCCCCHHHCCCCCCCCCC
TAEVGADDEAAAVKPRRTRRTLAARSTDVEAAE
HHHCCCCCCHHHCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA