Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488140

Identifier: 103488140

GI number: 103488140

Start: 2807992

End: 2808399

Strand: Reverse

Name: 103488140

Synonym: Sala_2663

Alternate gene names: NA

Gene position: 2808399-2807992 (Counterclockwise)

Preceding gene: 103488141

Following gene: 103488136

Centisome position: 83.95

GC content: 63.48

Gene sequence:

>408_bases
ATGATCCTCCTCACACAAGAATTGCGCGACCAACTGCGCGCCAACCACCGCGCCCGCTGTGAGGCGCTCCGCCGCAGTGA
ACCCGCACCCGACCCGGTGCCGGTGGTCCGCTTCTTCAATCCCCTTGGCCCCGCCACATGGCTTGCCACGGAACTGGATG
AGGACGGTATCCTCTTCGGCCTCGCCGATCTTGGCTTCGGCTGTCCGGAATTAGGGAGCTTTGCGCTGGAAGAACTGGAA
TCAATCCAGCTTCCCTTTGGTCTCGGAATCGAGCGCGATGTCCTCTTCGAGGGTAGGTTTCCGCTCTCGGTCTATGCCGA
GGCCGCTTCCCGCGCCGGATCGCTGGTCGAGGGTGAACACATCCTCCACCGGGGATCGGCGCCGGGCGCGAGCACGCTGT
CACCATAA

Upstream 100 bases:

>100_bases
TAAAAGATGACGCACGCGCCATCTTCACCGCGGCCAGCAAGGCCCAGGCGGCCGCCGACTGGATGCATGCCCAGCAGCCC
CAGGCGGAGGAGTTGGCGGC

Downstream 100 bases:

>100_bases
CGCCGATCGCCGGCGAGCGATCTCAAGCGCCATCATCCTCGCGGAAACGGTCCATCTGGTGCATGCGCTCGTGCAGGATA
GTGACGATCCCGACATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposon

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFGLADLGFGCPELGSFALEELE
SIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEHILHRGSAPGASTLSP

Sequences:

>Translated_135_residues
MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFGLADLGFGCPELGSFALEELE
SIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEHILHRGSAPGASTLSP
>Mature_135_residues
MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFGLADLGFGCPELGSFALEELE
SIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEHILHRGSAPGASTLSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14653; Mature: 14653

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFG
CEEEHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEE
LADLGFGCPELGSFALEELESIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEH
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHH
ILHRGSAPGASTLSP
HHCCCCCCCCCCCCC
>Mature Secondary Structure
MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFG
CEEEHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEE
LADLGFGCPELGSFALEELESIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEH
HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHH
ILHRGSAPGASTLSP
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA