| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488140
Identifier: 103488140
GI number: 103488140
Start: 2807992
End: 2808399
Strand: Reverse
Name: 103488140
Synonym: Sala_2663
Alternate gene names: NA
Gene position: 2808399-2807992 (Counterclockwise)
Preceding gene: 103488141
Following gene: 103488136
Centisome position: 83.95
GC content: 63.48
Gene sequence:
>408_bases ATGATCCTCCTCACACAAGAATTGCGCGACCAACTGCGCGCCAACCACCGCGCCCGCTGTGAGGCGCTCCGCCGCAGTGA ACCCGCACCCGACCCGGTGCCGGTGGTCCGCTTCTTCAATCCCCTTGGCCCCGCCACATGGCTTGCCACGGAACTGGATG AGGACGGTATCCTCTTCGGCCTCGCCGATCTTGGCTTCGGCTGTCCGGAATTAGGGAGCTTTGCGCTGGAAGAACTGGAA TCAATCCAGCTTCCCTTTGGTCTCGGAATCGAGCGCGATGTCCTCTTCGAGGGTAGGTTTCCGCTCTCGGTCTATGCCGA GGCCGCTTCCCGCGCCGGATCGCTGGTCGAGGGTGAACACATCCTCCACCGGGGATCGGCGCCGGGCGCGAGCACGCTGT CACCATAA
Upstream 100 bases:
>100_bases TAAAAGATGACGCACGCGCCATCTTCACCGCGGCCAGCAAGGCCCAGGCGGCCGCCGACTGGATGCATGCCCAGCAGCCC CAGGCGGAGGAGTTGGCGGC
Downstream 100 bases:
>100_bases CGCCGATCGCCGGCGAGCGATCTCAAGCGCCATCATCCTCGCGGAAACGGTCCATCTGGTGCATGCGCTCGTGCAGGATA GTGACGATCCCGACATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transposon
Number of amino acids: Translated: 135; Mature: 135
Protein sequence:
>135_residues MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFGLADLGFGCPELGSFALEELE SIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEHILHRGSAPGASTLSP
Sequences:
>Translated_135_residues MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFGLADLGFGCPELGSFALEELE SIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEHILHRGSAPGASTLSP >Mature_135_residues MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFGLADLGFGCPELGSFALEELE SIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEHILHRGSAPGASTLSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14653; Mature: 14653
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFG CEEEHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEE LADLGFGCPELGSFALEELESIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEH HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHH ILHRGSAPGASTLSP HHCCCCCCCCCCCCC >Mature Secondary Structure MILLTQELRDQLRANHRARCEALRRSEPAPDPVPVVRFFNPLGPATWLATELDEDGILFG CEEEHHHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCHHHHHHHCCCCCEEEE LADLGFGCPELGSFALEELESIQLPFGLGIERDVLFEGRFPLSVYAEAASRAGSLVEGEH HHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCHH ILHRGSAPGASTLSP HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA