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The map label for this gene is yubM [H]

Identifier: 103488136

GI number: 103488136

Start: 2804571

End: 2806712

Strand: Reverse

Name: yubM [H]

Synonym: Sala_2659

Alternate gene names: 103488136

Gene position: 2806712-2804571 (Counterclockwise)

Preceding gene: 103488140

Following gene: 103488135

Centisome position: 83.9

GC content: 65.55

Gene sequence:

>2142_bases
ATGGCCAAAGCGCCCCAGAAGCTCGTCCTCAGCGGCTCGCGCGACATTCCGTTCGACCGCCTGCATCTGTCCCAATCCAA
TGTCCGCCGGGTGAAGGCCGGCGTATCGATCGGCGAACTGGCGGAGGACATCGTCCGCCGCACGCTGCTCCAGAGCCTCA
ACGTGCGGCCCATACTCGACGCGGAAGGCGAGGAGACCGGCCAGTTCGAGGTGCCGGCCGGAGGCCGGCGGTTCCGGGCG
CTCGAGCTGCTGGTGAAGCAGAAGCGGCTCGCGAAGGACGCGCCCATTCCCTGCGTCGTCAAGGCAGCCAACGACGTGAT
CTCCGCCGAAGAAGACAGCTACGCGGAAAACACCTTCCGCGAGCAGCTTCACCCTCTCGACCAGTTCCGTGCCATGCGGG
AGATGGTGGACAAGGGCCAGGATATCGAATCGATCGCCGCACACTTCCTCGTGACGCCGGCGGTCGTGAGCCAGCGGCTG
AAGCTCGCGAAGGTCTCACCCAAGCTGCACGAGGTCTATGCCGAGGACGGCATGACGCTGGAGCAGCTCATGGCCTTTTC
CGTCTCCGACGACCATGAGCGCCAGGAGCAGGTCTGGGAGCTGCTCGCCCACAGCTACAACCGGTCGGGCGCCTACATCC
GGCAGAAGCTGACCGAGAACAGCGTGCGCGTCGCCGATAAGCGGGTGCGGTTTGTCGGGGTCGAGGCCTATGTCGAAGCC
GGTGGCGGCGTAATGCGCGACCTGTTCGAGGAGGACGATGGCGGCTGGCTGACCGATCCCGCGCTCCTCGACCGACTGGT
CGCCGAAAAACTCCAGGTCGAAGGCGAGAAGATCGGCGCCGAGGGCTGGAAGTGGGTCGCGACCGCCGTCGACCTGCCTT
GGGGTGTTACTAACGGCCTGCGCGAGATCGACGGCGTGCCAGTCCCGCGCACTCCCGAAGAGGATGCGCGGCTCGCAGCG
CTGGAAACCGAAGCCGAGAAGATCGAAGCGGAGTGGTCCGACGATCCGGACGTACCGGACGAGGTGCATGAACGTATTGC
TGCCATCGATGCGGAGATCGGCGCGCTGGTCGAGCGACCGCTGACCTTCGACGCGCAAGAGATGGCGCGGGCCGGCGTGT
TCGTGTCGATCGAGGTCGATGGATCGCTCTGCGTCGAGCGCGGCTATGTCCGTCCTGAGGATGAGCCGGTCATCGAGGGC
GAAGACGGTGAAGCCGATGCCGTTTGCGGCGTCGGCGGCGCCTCTGCCGGAGAGGAAGGCGATACGCTGGCTGGCACGGC
CGAGACCAATGTCGTGCCGATCGGCGCGGCATCTGGCGGGGATGACGAGGAGGATGGTGAAATCCTCAAGCCCCTTCCCG
ATCGCCTCGTCGCTGAACTGACCGCCTGGCGCACGCTTGCCCTACAGGACGCGTTCGCGCAGAATCCGTCCACGGCCTTC
GCGGCGGTGCTGCACGCATTAGTGCTCAGCACCTTCTACACCTACAGTCGCGAATCCTGCCTGGAACTGTCGCTCAGCAA
GGTGTCGTTCGGTTTTTCGCCATCGGGCTTGCGCGACAGCGCACCGGTCAAGGCGATTGCTGAGCGCCACAAGCGCTGGG
CCGACCGGCTGCCGGACAGCGACAAGGAGCTGTGGGACGCGCTGCTCCAGTTCGACGGGGCCGAACAGGCGGCGCTGTTC
GCGCACTGCGCCTCGCAGGCATTGAACGCGCAGCATGAGGTGGTGCCGAAGTATGACAACGGCCGCATCTCGAAGCACAG
CATCGAGCGGCGTATCGCGCATAGCCATGTCCTGGCGCGAGCTGTCGGCCTCGATCTGGTCGGCGCGGGCTGGCGTCCGA
CGGTCGAGGGCTATTTCCGCAGCGTGACCAAGCCGCGCATCCTTGCCGACGTCGCCGAGGCAAAGGGACCGAAGTTCGCC
GAGATGATCGATCATCTGAAGAAGGGCGACATGGCGAACGAGGCCGAACGGCTGCTGGAGGATTCGGGTTGGCTTCCCGA
GCCGATGCGAACGCCCGAACTGCTCGATGCACCTGCCGATGATCCGGCAGCGGAAACCGAAACCGCCGAACTACCCGCCT
TTCTCGATGACGATGCGCCGCCGGTCGATAACGGCGGTGAAGGCATCGCGGCAGCGGCCTGA

Upstream 100 bases:

>100_bases
TGCCTTTGGCAGGCCTTGAGAGGGAGAGGGAAGCCCGTGGCTTCATGACGGGCTTGGAGCCGGGAGAGAGTCTCGCGGCG
GTCCGTCATGGAGAAGTCCC

Downstream 100 bases:

>100_bases
CATCCGGGCGGGGCGGTTTCGGCCGTCCCGTCCATCCTCCCTTCATCATTCGAGCCCGGCGCATTTCGCGTCGGGCTTTC
GCATTTTCAGGAGTCATATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 713; Mature: 712

Protein sequence:

>713_residues
MAKAPQKLVLSGSRDIPFDRLHLSQSNVRRVKAGVSIGELAEDIVRRTLLQSLNVRPILDAEGEETGQFEVPAGGRRFRA
LELLVKQKRLAKDAPIPCVVKAANDVISAEEDSYAENTFREQLHPLDQFRAMREMVDKGQDIESIAAHFLVTPAVVSQRL
KLAKVSPKLHEVYAEDGMTLEQLMAFSVSDDHERQEQVWELLAHSYNRSGAYIRQKLTENSVRVADKRVRFVGVEAYVEA
GGGVMRDLFEEDDGGWLTDPALLDRLVAEKLQVEGEKIGAEGWKWVATAVDLPWGVTNGLREIDGVPVPRTPEEDARLAA
LETEAEKIEAEWSDDPDVPDEVHERIAAIDAEIGALVERPLTFDAQEMARAGVFVSIEVDGSLCVERGYVRPEDEPVIEG
EDGEADAVCGVGGASAGEEGDTLAGTAETNVVPIGAASGGDDEEDGEILKPLPDRLVAELTAWRTLALQDAFAQNPSTAF
AAVLHALVLSTFYTYSRESCLELSLSKVSFGFSPSGLRDSAPVKAIAERHKRWADRLPDSDKELWDALLQFDGAEQAALF
AHCASQALNAQHEVVPKYDNGRISKHSIERRIAHSHVLARAVGLDLVGAGWRPTVEGYFRSVTKPRILADVAEAKGPKFA
EMIDHLKKGDMANEAERLLEDSGWLPEPMRTPELLDAPADDPAAETETAELPAFLDDDAPPVDNGGEGIAAAA

Sequences:

>Translated_713_residues
MAKAPQKLVLSGSRDIPFDRLHLSQSNVRRVKAGVSIGELAEDIVRRTLLQSLNVRPILDAEGEETGQFEVPAGGRRFRA
LELLVKQKRLAKDAPIPCVVKAANDVISAEEDSYAENTFREQLHPLDQFRAMREMVDKGQDIESIAAHFLVTPAVVSQRL
KLAKVSPKLHEVYAEDGMTLEQLMAFSVSDDHERQEQVWELLAHSYNRSGAYIRQKLTENSVRVADKRVRFVGVEAYVEA
GGGVMRDLFEEDDGGWLTDPALLDRLVAEKLQVEGEKIGAEGWKWVATAVDLPWGVTNGLREIDGVPVPRTPEEDARLAA
LETEAEKIEAEWSDDPDVPDEVHERIAAIDAEIGALVERPLTFDAQEMARAGVFVSIEVDGSLCVERGYVRPEDEPVIEG
EDGEADAVCGVGGASAGEEGDTLAGTAETNVVPIGAASGGDDEEDGEILKPLPDRLVAELTAWRTLALQDAFAQNPSTAF
AAVLHALVLSTFYTYSRESCLELSLSKVSFGFSPSGLRDSAPVKAIAERHKRWADRLPDSDKELWDALLQFDGAEQAALF
AHCASQALNAQHEVVPKYDNGRISKHSIERRIAHSHVLARAVGLDLVGAGWRPTVEGYFRSVTKPRILADVAEAKGPKFA
EMIDHLKKGDMANEAERLLEDSGWLPEPMRTPELLDAPADDPAAETETAELPAFLDDDAPPVDNGGEGIAAAA
>Mature_712_residues
AKAPQKLVLSGSRDIPFDRLHLSQSNVRRVKAGVSIGELAEDIVRRTLLQSLNVRPILDAEGEETGQFEVPAGGRRFRAL
ELLVKQKRLAKDAPIPCVVKAANDVISAEEDSYAENTFREQLHPLDQFRAMREMVDKGQDIESIAAHFLVTPAVVSQRLK
LAKVSPKLHEVYAEDGMTLEQLMAFSVSDDHERQEQVWELLAHSYNRSGAYIRQKLTENSVRVADKRVRFVGVEAYVEAG
GGVMRDLFEEDDGGWLTDPALLDRLVAEKLQVEGEKIGAEGWKWVATAVDLPWGVTNGLREIDGVPVPRTPEEDARLAAL
ETEAEKIEAEWSDDPDVPDEVHERIAAIDAEIGALVERPLTFDAQEMARAGVFVSIEVDGSLCVERGYVRPEDEPVIEGE
DGEADAVCGVGGASAGEEGDTLAGTAETNVVPIGAASGGDDEEDGEILKPLPDRLVAELTAWRTLALQDAFAQNPSTAFA
AVLHALVLSTFYTYSRESCLELSLSKVSFGFSPSGLRDSAPVKAIAERHKRWADRLPDSDKELWDALLQFDGAEQAALFA
HCASQALNAQHEVVPKYDNGRISKHSIERRIAHSHVLARAVGLDLVGAGWRPTVEGYFRSVTKPRILADVAEAKGPKFAE
MIDHLKKGDMANEAERLLEDSGWLPEPMRTPELLDAPADDPAAETETAELPAFLDDDAPPVDNGGEGIAAAA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 77752; Mature: 77621

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAPQKLVLSGSRDIPFDRLHLSQSNVRRVKAGVSIGELAEDIVRRTLLQSLNVRPILD
CCCCCCHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEC
AEGEETGQFEVPAGGRRFRALELLVKQKRLAKDAPIPCVVKAANDVISAEEDSYAENTFR
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHCCCCCHHHHHHHH
EQLHPLDQFRAMREMVDKGQDIESIAAHFLVTPAVVSQRLKLAKVSPKLHEVYAEDGMTL
HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
EQLMAFSVSDDHERQEQVWELLAHSYNRSGAYIRQKLTENSVRVADKRVRFVGVEAYVEA
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHEEEHHHHHHC
GGGVMRDLFEEDDGGWLTDPALLDRLVAEKLQVEGEKIGAEGWKWVATAVDLPWGVTNGL
CCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCHHCCCCCCEEEEEHCCCCCCHHHHH
REIDGVPVPRTPEEDARLAALETEAEKIEAEWSDDPDVPDEVHERIAAIDAEIGALVERP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LTFDAQEMARAGVFVSIEVDGSLCVERGYVRPEDEPVIEGEDGEADAVCGVGGASAGEEG
CCCCHHHHHHCCEEEEEEECCCHHHHCCCCCCCCCCCEECCCCCCCCEECCCCCCCCCCC
DTLAGTAETNVVPIGAASGGDDEEDGEILKPLPDRLVAELTAWRTLALQDAFAQNPSTAF
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAVLHALVLSTFYTYSRESCLELSLSKVSFGFSPSGLRDSAPVKAIAERHKRWADRLPDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
DKELWDALLQFDGAEQAALFAHCASQALNAQHEVVPKYDNGRISKHSIERRIAHSHVLAR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AVGLDLVGAGWRPTVEGYFRSVTKPRILADVAEAKGPKFAEMIDHLKKGDMANEAERLLE
HHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
DSGWLPEPMRTPELLDAPADDPAAETETAELPAFLDDDAPPVDNGGEGIAAAA
HCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKAPQKLVLSGSRDIPFDRLHLSQSNVRRVKAGVSIGELAEDIVRRTLLQSLNVRPILD
CCCCCHHHCCCCCCCCHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEC
AEGEETGQFEVPAGGRRFRALELLVKQKRLAKDAPIPCVVKAANDVISAEEDSYAENTFR
CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECHHHHHCCCCCHHHHHHHH
EQLHPLDQFRAMREMVDKGQDIESIAAHFLVTPAVVSQRLKLAKVSPKLHEVYAEDGMTL
HHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
EQLMAFSVSDDHERQEQVWELLAHSYNRSGAYIRQKLTENSVRVADKRVRFVGVEAYVEA
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHEEEHHHHHHC
GGGVMRDLFEEDDGGWLTDPALLDRLVAEKLQVEGEKIGAEGWKWVATAVDLPWGVTNGL
CCHHHHHHHHCCCCCEECCHHHHHHHHHHHHHHCCHHCCCCCCEEEEEHCCCCCCHHHHH
REIDGVPVPRTPEEDARLAALETEAEKIEAEWSDDPDVPDEVHERIAAIDAEIGALVERP
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
LTFDAQEMARAGVFVSIEVDGSLCVERGYVRPEDEPVIEGEDGEADAVCGVGGASAGEEG
CCCCHHHHHHCCEEEEEEECCCHHHHCCCCCCCCCCCEECCCCCCCCEECCCCCCCCCCC
DTLAGTAETNVVPIGAASGGDDEEDGEILKPLPDRLVAELTAWRTLALQDAFAQNPSTAF
CCCCCCCCCCEEEEECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
AAVLHALVLSTFYTYSRESCLELSLSKVSFGFSPSGLRDSAPVKAIAERHKRWADRLPDS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC
DKELWDALLQFDGAEQAALFAHCASQALNAQHEVVPKYDNGRISKHSIERRIAHSHVLAR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
AVGLDLVGAGWRPTVEGYFRSVTKPRILADVAEAKGPKFAEMIDHLKKGDMANEAERLLE
HHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHH
DSGWLPEPMRTPELLDAPADDPAAETETAELPAFLDDDAPPVDNGGEGIAAAA
HCCCCCCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]