Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488127

Identifier: 103488127

GI number: 103488127

Start: 2794602

End: 2795534

Strand: Reverse

Name: 103488127

Synonym: Sala_2650

Alternate gene names: NA

Gene position: 2795534-2794602 (Counterclockwise)

Preceding gene: 103488128

Following gene: 103488126

Centisome position: 83.57

GC content: 64.63

Gene sequence:

>933_bases
ATGGCGACCGACCAGGACGATGGACACGAAGCGCAGCCCGGCTCTACCGCCTACCTGCTTCAGGAAATGCAGCTTTACGG
CTGCCGTCCCTTCGAGGATGAACCCGATCATCGGCCCTTGCCGGACGACCGCATCGCCGGCGGCGCGGTCGCCGAGATGT
TCGACGCGCTGGTCTCGTGCCTGATCGACACACGGATCGAACCCGACCTTGAGGATCTCGCCTGGGGCATCGTCAATGTC
TTCCACCGCGCCGGCGAGCGGATCGAGCGCGAACTCGACGACAATGAGCAAGCGCAGAAACGGCTTCAGCGCGAACAGGA
TGGCAGCGAGGTGAAGTCGGTCGAGTTGGAACGCAAGATCGCCGAAGGCATCACCACGATCGAGCGCCGGGACACCATGG
AGTTTTTCCGCGATGCTGCCGCCGACCAGTTCCGCATCCATATCCGCAAGCCCTGGCTGCCGCGTTCGGGCGCAATGGTG
AACCACAAGGCGCTGACCTCTGCAGTGCTCGACAGCCGCAAGGCGCTCGGCAAGCGCGCCTGGGAGAAGCAACGGGTCTT
CGATCCCGATGGCGTGCGGATCGCCTTTACCGGCGGCGTCGACTGCAACGACCATCAGCGCATCTACGCCGTGCTGGACA
AGGTCCACGCCCAGCTTCCGAACCTGATCCTGATGCACGGCGCGACGCCGACCGGCGCCGAACGCATCGCCGCCTGCTGG
GCGCGCGACCGGGGTGTGCCGCAGGATCCCTACCGGCCCGACTGGAACCGGCACAAGAAGGCCGCGCCGTTCAAGCGCAA
CGATGCCATGCTGGAGAAGATGCCGCGGGGTGTCATCGTGTTTCCGGGCACCGGCATCCAGGACAATCTCGCCGACAAGG
CTCGCAAGATGGGCATCCGCGTCTGGGACTTTCGCAATCGAAGACGCGATTAA

Upstream 100 bases:

>100_bases
GCCGCGCCCCAAGGGCCGCGGTTCTGTCCCGCTCCGCCCGCCGCCTGCCGTCGCCACGAAGGCCGCGAGAGGCGCGGCTG
TCAGATCACGGAGATTTTCG

Downstream 100 bases:

>100_bases
ATCCTTCTCGATTGCGGCCCACAGGATAGAAAAGCCGGCAAGCATCGATCCGCAGCATGGAACTGAGCGTAGAGGCCCCG
CTATCCCAGCGCATTTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MATDQDDGHEAQPGSTAYLLQEMQLYGCRPFEDEPDHRPLPDDRIAGGAVAEMFDALVSCLIDTRIEPDLEDLAWGIVNV
FHRAGERIERELDDNEQAQKRLQREQDGSEVKSVELERKIAEGITTIERRDTMEFFRDAAADQFRIHIRKPWLPRSGAMV
NHKALTSAVLDSRKALGKRAWEKQRVFDPDGVRIAFTGGVDCNDHQRIYAVLDKVHAQLPNLILMHGATPTGAERIAACW
ARDRGVPQDPYRPDWNRHKKAAPFKRNDAMLEKMPRGVIVFPGTGIQDNLADKARKMGIRVWDFRNRRRD

Sequences:

>Translated_310_residues
MATDQDDGHEAQPGSTAYLLQEMQLYGCRPFEDEPDHRPLPDDRIAGGAVAEMFDALVSCLIDTRIEPDLEDLAWGIVNV
FHRAGERIERELDDNEQAQKRLQREQDGSEVKSVELERKIAEGITTIERRDTMEFFRDAAADQFRIHIRKPWLPRSGAMV
NHKALTSAVLDSRKALGKRAWEKQRVFDPDGVRIAFTGGVDCNDHQRIYAVLDKVHAQLPNLILMHGATPTGAERIAACW
ARDRGVPQDPYRPDWNRHKKAAPFKRNDAMLEKMPRGVIVFPGTGIQDNLADKARKMGIRVWDFRNRRRD
>Mature_309_residues
ATDQDDGHEAQPGSTAYLLQEMQLYGCRPFEDEPDHRPLPDDRIAGGAVAEMFDALVSCLIDTRIEPDLEDLAWGIVNVF
HRAGERIERELDDNEQAQKRLQREQDGSEVKSVELERKIAEGITTIERRDTMEFFRDAAADQFRIHIRKPWLPRSGAMVN
HKALTSAVLDSRKALGKRAWEKQRVFDPDGVRIAFTGGVDCNDHQRIYAVLDKVHAQLPNLILMHGATPTGAERIAACWA
RDRGVPQDPYRPDWNRHKKAAPFKRNDAMLEKMPRGVIVFPGTGIQDNLADKARKMGIRVWDFRNRRRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35398; Mature: 35267

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATDQDDGHEAQPGSTAYLLQEMQLYGCRPFEDEPDHRPLPDDRIAGGAVAEMFDALVSC
CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LIDTRIEPDLEDLAWGIVNVFHRAGERIERELDDNEQAQKRLQREQDGSEVKSVELERKI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
AEGITTIERRDTMEFFRDAAADQFRIHIRKPWLPRSGAMVNHKALTSAVLDSRKALGKRA
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
WEKQRVFDPDGVRIAFTGGVDCNDHQRIYAVLDKVHAQLPNLILMHGATPTGAERIAACW
HHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
ARDRGVPQDPYRPDWNRHKKAAPFKRNDAMLEKMPRGVIVFPGTGIQDNLADKARKMGIR
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCE
VWDFRNRRRD
EEECHHCCCC
>Mature Secondary Structure 
ATDQDDGHEAQPGSTAYLLQEMQLYGCRPFEDEPDHRPLPDDRIAGGAVAEMFDALVSC
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LIDTRIEPDLEDLAWGIVNVFHRAGERIERELDDNEQAQKRLQREQDGSEVKSVELERKI
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHH
AEGITTIERRDTMEFFRDAAADQFRIHIRKPWLPRSGAMVNHKALTSAVLDSRKALGKRA
HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHH
WEKQRVFDPDGVRIAFTGGVDCNDHQRIYAVLDKVHAQLPNLILMHGATPTGAERIAACW
HHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
ARDRGVPQDPYRPDWNRHKKAAPFKRNDAMLEKMPRGVIVFPGTGIQDNLADKARKMGIR
HHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCHHHHHHHHHCCCE
VWDFRNRRRD
EEECHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA