Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488113

Identifier: 103488113

GI number: 103488113

Start: 2772597

End: 2773124

Strand: Reverse

Name: 103488113

Synonym: Sala_2636

Alternate gene names: NA

Gene position: 2773124-2772597 (Counterclockwise)

Preceding gene: 103488114

Following gene: 103488112

Centisome position: 82.9

GC content: 60.42

Gene sequence:

>528_bases
ATGCTCTATCCGTCACGCGATCTCCATGGCCCGGCACAGTCGCGGGCAGTCCGCGACCTGTTTCAAAGCCTGTTCGTCGC
CGAACTCATCCATCCCAGCCCGAAGCTGTGGCTTTTCTTCGCTTGGATCAGCGATGTCGAGATCATCGACAATTCCGCGC
GCGAGTTCGCAGCGCTCGAGCCGGATTGGCCGGCGGCGCCGATCCGCTTGTCGCAAGTGCTCCGCGCCTTACTCGCCCGT
GGCGTCGAACTTCGGCTGGTGATCCGCGCGGACGGCCACAATGACTATTTCATCGCTCGCCTTCAGACACTCAAGGCGCG
CTACGGCGATCAGATCAAATGGACCGTGGAGAAGAGTTTCCACGCCAAGGGCCTGCTCGGTGCCGACTACTTCTTGAGCG
GTTCGATGAATCTCACGCTCAACGGCATTTCGATCAACGGCGAACATCTCGTACTGCGTACCGACCCGGCGGCGGTCGCC
GAGCAATCGATCGAGCTTGAATCGCGCTGGGAAAGCCAGATGACATGA

Upstream 100 bases:

>100_bases
CTGTCAGCGTCGGTGTGCTTCAGTTCTTCCCCGCCACCGAGCGGGTCGAACGCGCCGATGGCAGAATTTTCGCGACGCTG
ACCCTGAGGGAGCAGGTCTG

Downstream 100 bases:

>100_bases
TCGGCCCGAACCTCGATGCGGCGCAGGCCGTACTGGCAGATCTCGTCGCCCTCCAGCCATGCGCGAGCGCGAGCAATGAA
ATCGCCGCATTGTGCGCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALEPDWPAAPIRLSQVLRALLAR
GVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSFHAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVA
EQSIELESRWESQMT

Sequences:

>Translated_175_residues
MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALEPDWPAAPIRLSQVLRALLAR
GVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSFHAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVA
EQSIELESRWESQMT
>Mature_175_residues
MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALEPDWPAAPIRLSQVLRALLAR
GVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSFHAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVA
EQSIELESRWESQMT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19787; Mature: 19787

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCHHHEECC
PDWPAAPIRLSQVLRALLARGVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSF
CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCC
HAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVAEQSIELESRWESQMT
CCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCHHHHHHHCCHHHHHHHCCC
>Mature Secondary Structure
MLYPSRDLHGPAQSRAVRDLFQSLFVAELIHPSPKLWLFFAWISDVEIIDNSAREFAALE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHCCCCHHHEECC
PDWPAAPIRLSQVLRALLARGVELRLVIRADGHNDYFIARLQTLKARYGDQIKWTVEKSF
CCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCEEHHHHHHHHHHCCCEEEEEEECCC
HAKGLLGADYFLSGSMNLTLNGISINGEHLVLRTDPAAVAEQSIELESRWESQMT
CCCCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCHHHHHHHCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA