| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488111
Identifier: 103488111
GI number: 103488111
Start: 2769535
End: 2769855
Strand: Reverse
Name: 103488111
Synonym: Sala_2633
Alternate gene names: NA
Gene position: 2769855-2769535 (Counterclockwise)
Preceding gene: 103488112
Following gene: 103488109
Centisome position: 82.8
GC content: 61.06
Gene sequence:
>321_bases ATGGCCACTATCGCTAACCTCACCGTGAAGAACGACGGCAGCCTCGAAGGTACGCTCGCCACTCTCACCGTTTCGGCACC GATTGCCATCATCCCCAACGCCCGCAAGGCCAAGGAATCCGAACCCGACTATCGCATCATCAGCCGCAAGAACGGCTTCG AGTTGGGCGCAGGCTGGAACCGCTTCTCGCAGAATACGGGCGCCGAATATGTCTCGGTCTCGCTGTCCGCGCCCGAGTTC GGCACCATCTACGGTAATATCGCCAACGCGCCCGGCGACGACCCGACGAAGAAGGTCATCATCTGGAATCCGCCGGCCTG A
Upstream 100 bases:
>100_bases AGGGGGTTCCCCTTCGCTTGCGCTGCGGTGACGTCGGCAACCGGGCTCTCCTTTGGGCGCCATCGGGGATGGTCCCCGAG CAACCGAAGGAGTTTTTGTC
Downstream 100 bases:
>100_bases TCCGGCTCCGGCCCCGCTCACGGGCGGGGCCACCCCCTTTCCCACGATCAGCAGATGCGGGACAGGCCCGAGCCTGTCCC GGTATCACCGTGTTTAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MATIANLTVKNDGSLEGTLATLTVSAPIAIIPNARKAKESEPDYRIISRKNGFELGAGWNRFSQNTGAEYVSVSLSAPEF GTIYGNIANAPGDDPTKKVIIWNPPA
Sequences:
>Translated_106_residues MATIANLTVKNDGSLEGTLATLTVSAPIAIIPNARKAKESEPDYRIISRKNGFELGAGWNRFSQNTGAEYVSVSLSAPEF GTIYGNIANAPGDDPTKKVIIWNPPA >Mature_105_residues ATIANLTVKNDGSLEGTLATLTVSAPIAIIPNARKAKESEPDYRIISRKNGFELGAGWNRFSQNTGAEYVSVSLSAPEFG TIYGNIANAPGDDPTKKVIIWNPPA
Specific function: Unknown
COG id: COG5489
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11263; Mature: 11132
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIANLTVKNDGSLEGTLATLTVSAPIAIIPNARKAKESEPDYRIISRKNGFELGAGWN CCEEEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCEEECCCCC RFSQNTGAEYVSVSLSAPEFGTIYGNIANAPGDDPTKKVIIWNPPA CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCC >Mature Secondary Structure ATIANLTVKNDGSLEGTLATLTVSAPIAIIPNARKAKESEPDYRIISRKNGFELGAGWN CEEEEEEECCCCCCCEEEEEEEECCCEEECCCCCCCCCCCCCEEEEECCCCEEECCCCC RFSQNTGAEYVSVSLSAPEFGTIYGNIANAPGDDPTKKVIIWNPPA CCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA