| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is 103488109
Identifier: 103488109
GI number: 103488109
Start: 2768573
End: 2768737
Strand: Reverse
Name: 103488109
Synonym: Sala_2631
Alternate gene names: NA
Gene position: 2768737-2768573 (Counterclockwise)
Preceding gene: 103488111
Following gene: 103488108
Centisome position: 82.77
GC content: 60.61
Gene sequence:
>165_bases ATGCCGCTTTCCACCGCCCAGTCGCTCGCCTGGAACCTCGCAAAGACGCTGATGACGGTCGTCGTTCTTATCAGGACCGA CCACGGCTACGCGGTGATGCCCTGGGACGAGTTTGACGGCAATCCGGCGCAGGTGGTGCACGAATATGACCCATTCCCAT CCTGA
Upstream 100 bases:
>100_bases CCGCTTGGACAAGCCGGCGCGGTGATTGCGGCCAGACCCCGGCCGCCGGGGCACCTGCCCTGCGGGGATGGTCTCCGCTT ACCGGACAGGAGTTCGCGTG
Downstream 100 bases:
>100_bases TCGGTGGATCAGCTCGCTTGCCCGTCGAAGGCAGATTTCCGTTTCGGCCAGTGCTTCCGCGCGCTATTCTCGCCGTCGCA ACATAGCGCTGTGGAGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 54; Mature: 53
Protein sequence:
>54_residues MPLSTAQSLAWNLAKTLMTVVVLIRTDHGYAVMPWDEFDGNPAQVVHEYDPFPS
Sequences:
>Translated_54_residues MPLSTAQSLAWNLAKTLMTVVVLIRTDHGYAVMPWDEFDGNPAQVVHEYDPFPS >Mature_53_residues PLSTAQSLAWNLAKTLMTVVVLIRTDHGYAVMPWDEFDGNPAQVVHEYDPFPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6061; Mature: 5930
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSTAQSLAWNLAKTLMTVVVLIRTDHGYAVMPWDEFDGNPAQVVHEYDPFPS CCCCHHHHHHHHHHHHHHHHHHHEECCCCCEECCHHCCCCCHHHEEECCCCCCC >Mature Secondary Structure PLSTAQSLAWNLAKTLMTVVVLIRTDHGYAVMPWDEFDGNPAQVVHEYDPFPS CCCHHHHHHHHHHHHHHHHHHHEECCCCCEECCHHCCCCCHHHEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA