Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103488042

Identifier: 103488042

GI number: 103488042

Start: 2703483

End: 2704052

Strand: Reverse

Name: 103488042

Synonym: Sala_2564

Alternate gene names: NA

Gene position: 2704052-2703483 (Counterclockwise)

Preceding gene: 103488049

Following gene: 103488040

Centisome position: 80.83

GC content: 63.68

Gene sequence:

>570_bases
TTGGCGCAAGGCTCCTCAGTCACGACCGATTGGTGCGACAGCATTGCTGATCCTGCCGTCGTCCTGCGCGAGCACGGCTT
GCTGGCCGACCTCATCATCATGAGTTTGCCGAGGGAGGGCGATGTGGCGCAGGCCGATCCCGTCGATCTCGCTGCCGCCA
CAGGCACTTCCATTCTTCGCTTGGGTACTGCAACCTCGCGAGAGGCCTTTCGACGCGTGCTGCTCGGTTGGAAGGATTGC
CGGGAGTCGCGCTGCGCCTTGCGGGCAGCCTTGCCCTTCCTGCGGCGGGCCGAAACCATCCTGATCGCAGGCGTGGGCGA
CGAAGCGTCACCGGAGTGCCTCAGCGCCGTGCAGCGTTATCTTTGCGCCCGCGATATGAACGCACAACACGACCACATTC
CCGACAATGGCAAAGGTGCGGCTGCATCGATGACCGAGGTCGCCCGACGCGAGGGCTATGGCCTGCTGGTGGCAGGCGCT
CGCGCCCAAGGCCGGTGGAAAGAGCGGATAGTCGGTGGCGCCACCGAGGAACTGCTGAGAACCGATGTGAACTGGCTTTT
GGCAAATTAG

Upstream 100 bases:

>100_bases
TGTCCTTCGCTGATGCCCTCGTCCGCGGTCCTTTTCAATCGATGGCTCGGGAAGAAGAAATGCGTCAAGCGATCGCGCTT
CGCGAGCAACATTCGATCGC

Downstream 100 bases:

>100_bases
ATATGCGGCTCGCTTTTCCGTCACGATAGGGTCTGTGCTCCGGCATGGCGGAGCAAGCTGCGGTAGGTGCCACCGGCGGA
TGGGCGCCTCAGACTAGGAG

Product: universal stress protein, UspA

Products: NA

Alternate protein names: Universal Stress Protein Family; UspA Domain-Containing Protein

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MAQGSSVTTDWCDSIADPAVVLREHGLLADLIIMSLPREGDVAQADPVDLAAATGTSILRLGTATSREAFRRVLLGWKDC
RESRCALRAALPFLRRAETILIAGVGDEASPECLSAVQRYLCARDMNAQHDHIPDNGKGAAASMTEVARREGYGLLVAGA
RAQGRWKERIVGGATEELLRTDVNWLLAN

Sequences:

>Translated_189_residues
MAQGSSVTTDWCDSIADPAVVLREHGLLADLIIMSLPREGDVAQADPVDLAAATGTSILRLGTATSREAFRRVLLGWKDC
RESRCALRAALPFLRRAETILIAGVGDEASPECLSAVQRYLCARDMNAQHDHIPDNGKGAAASMTEVARREGYGLLVAGA
RAQGRWKERIVGGATEELLRTDVNWLLAN
>Mature_188_residues
AQGSSVTTDWCDSIADPAVVLREHGLLADLIIMSLPREGDVAQADPVDLAAATGTSILRLGTATSREAFRRVLLGWKDCR
ESRCALRAALPFLRRAETILIAGVGDEASPECLSAVQRYLCARDMNAQHDHIPDNGKGAAASMTEVARREGYGLLVAGAR
AQGRWKERIVGGATEELLRTDVNWLLAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20353; Mature: 20222

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQGSSVTTDWCDSIADPAVVLREHGLLADLIIMSLPREGDVAQADPVDLAAATGTSILR
CCCCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHEE
LGTATSREAFRRVLLGWKDCRESRCALRAALPFLRRAETILIAGVGDEASPECLSAVQRY
ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH
LCARDMNAQHDHIPDNGKGAAASMTEVARREGYGLLVAGARAQGRWKERIVGGATEELLR
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCHHHHHHH
TDVNWLLAN
HHHHHHCCC
>Mature Secondary Structure 
AQGSSVTTDWCDSIADPAVVLREHGLLADLIIMSLPREGDVAQADPVDLAAATGTSILR
CCCCCCCHHHHHHHCCHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCHHEE
LGTATSREAFRRVLLGWKDCRESRCALRAALPFLRRAETILIAGVGDEASPECLSAVQRY
ECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHH
LCARDMNAQHDHIPDNGKGAAASMTEVARREGYGLLVAGARAQGRWKERIVGGATEELLR
HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCHHHHHHH
TDVNWLLAN
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA