Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487983

Identifier: 103487983

GI number: 103487983

Start: 2639870

End: 2640478

Strand: Reverse

Name: 103487983

Synonym: Sala_2504

Alternate gene names: NA

Gene position: 2640478-2639870 (Counterclockwise)

Preceding gene: 103487984

Following gene: 103487982

Centisome position: 78.93

GC content: 66.17

Gene sequence:

>609_bases
ATGGTTGAACGAAAGACATGGGCGTGGCTCGCCGCCGGTGCGGTCGTCGTCGGCGCGGGTGCCTTCGCGCAAAGCGGCGT
GGGGGACCGCGGCAGGGGGGATGCGCGTCCGATGGTGCAACTGCCCCCGGCAGCGGTCGTCCCGGCCAGCTCCGCGGCGT
CGGCCCCGACGGCGTTGTCGCCTGCCAGCCTGACCACGACAGTGGGCGGCTATACCTACGACTGGACCGCGCTGCAGGCG
GCCATCGATGCCGACGCCGAAGTCGCGAACGGCTATTTCATCGTCGGTAACGCCACCGACCCCGACTATCTGTTTGCATA
TGAGAAGGGCAGCTTCGGAATCGATCGGGTGACGCCACTCGCCTCGGCCACCAAATGGTTCGCAGGAACGCTCGCCATGC
GGATGGCGCAGGCGGGGATTGTCACGCTGGACGACCCGATGCGGCCGCCGCTCGCCTTCTGGACGACGACCGGGACAAAG
AAGGACGTCAAGCTGAAGCATGCGCTGTCGATGACGTCGGGGTTCAACGGCAGCCCGCTGGTCGGAGGGTGCCAGCTGAC
ACCGGCGCTGATCCTGTACAATTGCGCGAAAAATATCCACGACCTGTGA

Upstream 100 bases:

>100_bases
GGGGTCGAAGGACGTATCTCCTTCTGATCCGGCGGCCGCCGCGCCGCGTTCAGCGGCGCCTCCTTTCGAAACGTGCAACG
AAGAGGATGGGAGAGACGAT

Downstream 100 bases:

>100_bases
TACGACATCCTGCGTCCCGGCAACGCGCCGGGTGCGCAATATAGCTATGGCCCGCACGGGATGCAGGTCGCCGCCGCCTA
TCTCGAGGCGAAGGATGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALSPASLTTTVGGYTYDWTALQA
AIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPLASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTK
KDVKLKHALSMTSGFNGSPLVGGCQLTPALILYNCAKNIHDL

Sequences:

>Translated_202_residues
MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALSPASLTTTVGGYTYDWTALQA
AIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPLASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTK
KDVKLKHALSMTSGFNGSPLVGGCQLTPALILYNCAKNIHDL
>Mature_202_residues
MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALSPASLTTTVGGYTYDWTALQA
AIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPLASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTK
KDVKLKHALSMTSGFNGSPLVGGCQLTPALILYNCAKNIHDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21012; Mature: 21012

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALS
CCCCCCHHHHHHCEEEEECCHHHHCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCC
PASLTTTVGGYTYDWTALQAAIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPL
CCCCEEECCCEEECHHHHHHHHCCCCEECCCEEEEECCCCCCEEEEECCCCCCCCHHCHH
ASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTKKDVKLKHALSMTSGFNGSPL
HHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCC
VGGCQLTPALILYNCAKNIHDL
CCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVERKTWAWLAAGAVVVGAGAFAQSGVGDRGRGDARPMVQLPPAAVVPASSAASAPTALS
CCCCCCHHHHHHCEEEEECCHHHHCCCCCCCCCCCCCEEECCCCEEECCCCCCCCCCCCC
PASLTTTVGGYTYDWTALQAAIDADAEVANGYFIVGNATDPDYLFAYEKGSFGIDRVTPL
CCCCEEECCCEEECHHHHHHHHCCCCEECCCEEEEECCCCCCEEEEECCCCCCCCHHCHH
ASATKWFAGTLAMRMAQAGIVTLDDPMRPPLAFWTTTGTKKDVKLKHALSMTSGFNGSPL
HHHHHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCEEHHHHHHHHCCCCCCCC
VGGCQLTPALILYNCAKNIHDL
CCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA