Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is lptG [H]

Identifier: 103487658

GI number: 103487658

Start: 2287181

End: 2288281

Strand: Direct

Name: lptG [H]

Synonym: Sala_2177

Alternate gene names: 103487658

Gene position: 2287181-2288281 (Clockwise)

Preceding gene: 103487657

Following gene: 103487660

Centisome position: 68.37

GC content: 65.21

Gene sequence:

>1101_bases
ATGCACCAGCTTCATTTCTTTCCCTCGCGCACCATGGCGCTCTATGTCGGGCGGCTGTTCCTGTTCCGCACCTTTGCGAT
CCTTTTTGCGCTCGTGCTGATCCTCCAGACGCTCGACCTGCTCGGCGAAAGCGGCAAGATCCTGGCCGTTCCGGGCAACG
GCGACAGCGACGTATGGCGCTATGTCGGAATGCGGATGCCGCAGATCATCGAGACCTTCCTGCCCTTTTCGGTGCTGCTC
GGCACGATATTGACGATGGTGACGCTCAACCAGAACAGCGAGGTCGTCGCGATGAAGGCGGCGGGCATGTCGGCGCATCA
GGTGCTCGCGCCGCTGTTCCTCGCGGCGCTGCTGGTCGCGGGGATCAGCTTTGCCTTCAACGAACGCATCGTCACGCGCT
CGACCGCGGCGCTCGGCGCCTGGCAAAAGGTCGAATACAAGCGCGTTCCTGTCGACAGCGGGGTGCGCAGCAACATCTGG
GTGCGCGACGGCGACGATCTGATCAACGCCGAAACGGTCGAGACGTCGGGGCCCGCGGTCGTGCTGCGCGGCGTCACCAT
CTATGAACGCACGCGCGGCGTCCTGTCGTCGATGCTGTCGGCCGACAGCGCGCGCGCGCTGCCCGGCGGTGGATGGGAAA
TGGCGAACGCGCGGCGCTTCTCGCGCCGATCGGGAACACTCGAACCGCTGGGCACGATCGTTGCGGCACCAAATGTGCGC
CCCGACCAGTTCACGCTCGCCGACGTCGACGGCGACGAACTGCCCTTCCTGAAGCTGAAGGCGGCGATCGACGACCTCGA
AGCCGCGGGGCGCCCGGTCGATGCGCTGAAGGGCGTGCTGTGGCACAAGATTTCGGGGCCGCTGTCGGCGATCTTGATGC
CGCTGCTCGGCGCCGTCGCGGCGTTCGGGCTGGCGCGATCGGGCAAGCTGTTCGTGCGCGCGATCATCGGCATGGCGCTG
GGCTTCGCCTATTTCGTCGCCGACAATTTCGCGCTGGCGATGGGCGATCTGGGCGCTTACTCGCCGTTTCTGGCGGCGTG
GGGTCCGTTCATCCTGTTCGCGCTGATCGGCGAGATGATTTTGATCAGGACTGAGGAATAG

Upstream 100 bases:

>100_bases
GTGGCCAGCCGATCGGCGCGCTCGAGCGCGTCGCGGCGAAGGGCGCGGAGCGGCTCCGCGGCCTCGTCCGTCTGTTCCAG
CGTGAGCGAAGGCCGGGCTG

Downstream 100 bases:

>100_bases
GGGACAGCGTCGGCTCGCGGGGGCGACGGGTTTATCCTCAGGCCGCCTTGCCCCGCGCCGAACCCGCGACCAAGTTCGCC
ACCAGTTTCGGCAGACTGTC

Product: permease YjgP/YjgQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MHQLHFFPSRTMALYVGRLFLFRTFAILFALVLILQTLDLLGESGKILAVPGNGDSDVWRYVGMRMPQIIETFLPFSVLL
GTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVAGISFAFNERIVTRSTAALGAWQKVEYKRVPVDSGVRSNIW
VRDGDDLINAETVETSGPAVVLRGVTIYERTRGVLSSMLSADSARALPGGGWEMANARRFSRRSGTLEPLGTIVAAPNVR
PDQFTLADVDGDELPFLKLKAAIDDLEAAGRPVDALKGVLWHKISGPLSAILMPLLGAVAAFGLARSGKLFVRAIIGMAL
GFAYFVADNFALAMGDLGAYSPFLAAWGPFILFALIGEMILIRTEE

Sequences:

>Translated_366_residues
MHQLHFFPSRTMALYVGRLFLFRTFAILFALVLILQTLDLLGESGKILAVPGNGDSDVWRYVGMRMPQIIETFLPFSVLL
GTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVAGISFAFNERIVTRSTAALGAWQKVEYKRVPVDSGVRSNIW
VRDGDDLINAETVETSGPAVVLRGVTIYERTRGVLSSMLSADSARALPGGGWEMANARRFSRRSGTLEPLGTIVAAPNVR
PDQFTLADVDGDELPFLKLKAAIDDLEAAGRPVDALKGVLWHKISGPLSAILMPLLGAVAAFGLARSGKLFVRAIIGMAL
GFAYFVADNFALAMGDLGAYSPFLAAWGPFILFALIGEMILIRTEE
>Mature_366_residues
MHQLHFFPSRTMALYVGRLFLFRTFAILFALVLILQTLDLLGESGKILAVPGNGDSDVWRYVGMRMPQIIETFLPFSVLL
GTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVAGISFAFNERIVTRSTAALGAWQKVEYKRVPVDSGVRSNIW
VRDGDDLINAETVETSGPAVVLRGVTIYERTRGVLSSMLSADSARALPGGGWEMANARRFSRRSGTLEPLGTIVAAPNVR
PDQFTLADVDGDELPFLKLKAAIDDLEAAGRPVDALKGVLWHKISGPLSAILMPLLGAVAAFGLARSGKLFVRAIIGMAL
GFAYFVADNFALAMGDLGAYSPFLAAWGPFILFALIGEMILIRTEE

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI87082400, Length=366, Percent_Identity=25.4098360655738, Blast_Score=78, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 39529; Mature: 39529

Theoretical pI: Translated: 7.82; Mature: 7.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHQLHFFPSRTMALYVGRLFLFRTFAILFALVLILQTLDLLGESGKILAVPGNGDSDVWR
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
YVGMRMPQIIETFLPFSVLLGTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVA
HHHCCCHHHHHHHCCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
GISFAFNERIVTRSTAALGAWQKVEYKRVPVDSGVRSNIWVRDGDDLINAETVETSGPAV
HHHHHHCCHHHHHHHHHHCCHHHCCEEECCCCCCCCCCEEEECCCCCCCCEEECCCCCEE
VLRGVTIYERTRGVLSSMLSADSARALPGGGWEMANARRFSRRSGTLEPLGTIVAAPNVR
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHEEECCCCC
PDQFTLADVDGDELPFLKLKAAIDDLEAAGRPVDALKGVLWHKISGPLSAILMPLLGAVA
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AFGLARSGKLFVRAIIGMALGFAYFVADNFALAMGDLGAYSPFLAAWGPFILFALIGEMI
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC
LIRTEE
EEEECC
>Mature Secondary Structure
MHQLHFFPSRTMALYVGRLFLFRTFAILFALVLILQTLDLLGESGKILAVPGNGDSDVWR
CCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHH
YVGMRMPQIIETFLPFSVLLGTILTMVTLNQNSEVVAMKAAGMSAHQVLAPLFLAALLVA
HHHCCCHHHHHHHCCHHHHHHHHHHHHEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
GISFAFNERIVTRSTAALGAWQKVEYKRVPVDSGVRSNIWVRDGDDLINAETVETSGPAV
HHHHHHCCHHHHHHHHHHCCHHHCCEEECCCCCCCCCCEEEECCCCCCCCEEECCCCCEE
VLRGVTIYERTRGVLSSMLSADSARALPGGGWEMANARRFSRRSGTLEPLGTIVAAPNVR
EEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHEEECCCCC
PDQFTLADVDGDELPFLKLKAAIDDLEAAGRPVDALKGVLWHKISGPLSAILMPLLGAVA
CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
AFGLARSGKLFVRAIIGMALGFAYFVADNFALAMGDLGAYSPFLAAWGPFILFALIGEMI
HHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCHHHHHHHHHHHHHHHHCCC
LIRTEE
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]