| Definition | Sphingopyxis alaskensis RB2256, complete genome. |
|---|---|
| Accession | NC_008048 |
| Length | 3,345,170 |
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The map label for this gene is yjgP [C]
Identifier: 103487657
GI number: 103487657
Start: 2285973
End: 2287181
Strand: Direct
Name: yjgP [C]
Synonym: Sala_2176
Alternate gene names: 103487657
Gene position: 2285973-2287181 (Clockwise)
Preceding gene: 103487653
Following gene: 103487658
Centisome position: 68.34
GC content: 65.01
Gene sequence:
>1209_bases TTGAATAAGCTGCCTGCCATCGACCGCTACATCGCGCGGCTCATCTTTTTTCCCATGGTCGGCACGCTCGTGCTGTCGGC GATGCTGCTCGTGCTCGAAAAGATGCTGCGTCTGTTCGACTTTGTCGCGACCGAAGGCGGCCCGGTGAGCGTCGTGTGGC GGATGCTCGCCAACCTGATCCCCGAATATCTCTCGCTGGGCATCCCGATCGGGCTGATGCTGGGGATTCTGCTGGCTTTC CGCAGGCTTGCGACATCGAGCGAGCTCGACGTGCTGAAGGGCGTCGGCATGAGTTTCGGGCGGCTGATGCGGATGCCCTA TGTCTATGCGGTCGGCCTCGCCGCGCTCAACCTTGCGATCGTCGGCTTCATCCAGCCCTATGCCCGCTATGCCTATGAAG GTTTGCAGTTCGAGCTCCGATCGGGCGCGCTCGGCGCGTCGATCAAGGTCGGCGAATTCACCCGGCTGGGCGAGCGGATG ACGCTGCGCATCGAGGAAAGCTATAATGAAGGCCGATCCCTGCGCGGCATTTTCGTGCGCGGCGAACAGCGCGACGGGCA ACGCGTGTCGGCGACCGCGTCGCGCGGGCAGTTCCTGGCGACCGACGACCCTGAAACGATCATCCTGCGCCTGTCGCAAG GGGTGCTGATCCACGAATCGCCCAAATTCGCGGTGCCGCGCGTGCTGACCTTTGACAATCACGACCTGCCGATCCCGCTG CCCAGGATCGAGGCGTTCCGCCTGCGCGGCGGCGCCGATCGCGAAATGACGATCCCGGAACTGTTCGTCGCGGGCAAGGA CCGCCGCCAGTCCGAACAGACGCGGCTCGAATCGCGCGCCAATTTCCACTTCCGCATCGTCGAGGTGATGTCGATGTTCC TGATCCCGCTGATCGCGGTCGCGCTCGCGGTGCCGCCCAAACGGTCGACCTCGTCGCTCGGCGTTTTCCTGTCGATCGTG CTGCTCGTCACCCAGCACAAGATCAACCAATATGCCGAGGATCTGGGCGCGCGCGGCGCGGTCGATCCGCTGATCGCGCT CTGGGTGCCCTTCCTCCTCTTCGCGGCGCTCGCGATCTGGATGTATTATACGATCGCGCACGTCCCCGGTGGCCAGCCGA TCGGCGCGCTCGAGCGCGTCGCGGCGAAGGGCGCGGAGCGGCTCCGCGGCCTCGTCCGTCTGTTCCAGCGTGAGCGAAGG CCGGGCTGA
Upstream 100 bases:
>100_bases CCGCGCACGCACGGCGCACGCCGACATGGGTCCCTGTCGCCCTTGAATCGGCATATCGGAAACATTTGCGGCCAAAACAT GGTGATGGGGCGACGAAAGA
Downstream 100 bases:
>100_bases TGCACCAGCTTCATTTCTTTCCCTCGCGCACCATGGCGCTCTATGTCGGGCGGCTGTTCCTGTTCCGCACCTTTGCGATC CTTTTTGCGCTCGTGCTGAT
Product: permease YjgP/YjgQ
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; Transporter YjgP/YjgQ; Permease Family Protein; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease; Permease YjgP; YjgP/YjgQ Family Protein
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MNKLPAIDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGGPVSVVWRMLANLIPEYLSLGIPIGLMLGILLAF RRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLAIVGFIQPYARYAYEGLQFELRSGALGASIKVGEFTRLGERM TLRIEESYNEGRSLRGIFVRGEQRDGQRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIPL PRIEAFRLRGGADREMTIPELFVAGKDRRQSEQTRLESRANFHFRIVEVMSMFLIPLIAVALAVPPKRSTSSLGVFLSIV LLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAALAIWMYYTIAHVPGGQPIGALERVAAKGAERLRGLVRLFQRERR PG
Sequences:
>Translated_402_residues MNKLPAIDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGGPVSVVWRMLANLIPEYLSLGIPIGLMLGILLAF RRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLAIVGFIQPYARYAYEGLQFELRSGALGASIKVGEFTRLGERM TLRIEESYNEGRSLRGIFVRGEQRDGQRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIPL PRIEAFRLRGGADREMTIPELFVAGKDRRQSEQTRLESRANFHFRIVEVMSMFLIPLIAVALAVPPKRSTSSLGVFLSIV LLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAALAIWMYYTIAHVPGGQPIGALERVAAKGAERLRGLVRLFQRERR PG >Mature_402_residues MNKLPAIDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGGPVSVVWRMLANLIPEYLSLGIPIGLMLGILLAF RRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLAIVGFIQPYARYAYEGLQFELRSGALGASIKVGEFTRLGERM TLRIEESYNEGRSLRGIFVRGEQRDGQRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIPL PRIEAFRLRGGADREMTIPELFVAGKDRRQSEQTRLESRANFHFRIVEVMSMFLIPLIAVALAVPPKRSTSSLGVFLSIV LLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAALAIWMYYTIAHVPGGQPIGALERVAAKGAERLRGLVRLFQRERR PG
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44794; Mature: 44794
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLPAIDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGGPVSVVWRMLANLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PEYLSLGIPIGLMLGILLAFRRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLAI HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VGFIQPYARYAYEGLQFELRSGALGASIKVGEFTRLGERMTLRIEESYNEGRSLRGIFVR HHHHHHHHHHHHHCCCEEECCCCCCCCEECCHHHHCCCCEEEEEECCCCCCCCEEEEEEE GEQRDGQRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIPL CCCCCCCEEEHHHCCCCEEECCCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCC PRIEAFRLRGGADREMTIPELFVAGKDRRQSEQTRLESRANFHFRIVEVMSMFLIPLIAV CCHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALAVPPKRSTSSLGVFLSIVLLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAALAIW HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH MYYTIAHVPGGQPIGALERVAAKGAERLRGLVRLFQRERRPG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNKLPAIDRYIARLIFFPMVGTLVLSAMLLVLEKMLRLFDFVATEGGPVSVVWRMLANLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PEYLSLGIPIGLMLGILLAFRRLATSSELDVLKGVGMSFGRLMRMPYVYAVGLAALNLAI HHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH VGFIQPYARYAYEGLQFELRSGALGASIKVGEFTRLGERMTLRIEESYNEGRSLRGIFVR HHHHHHHHHHHHHCCCEEECCCCCCCCEECCHHHHCCCCEEEEEECCCCCCCCEEEEEEE GEQRDGQRVSATASRGQFLATDDPETIILRLSQGVLIHESPKFAVPRVLTFDNHDLPIPL CCCCCCCEEEHHHCCCCEEECCCCCEEEEEECCCEEEECCCCCCCCEEEEECCCCCCCCC PRIEAFRLRGGADREMTIPELFVAGKDRRQSEQTRLESRANFHFRIVEVMSMFLIPLIAV CCHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ALAVPPKRSTSSLGVFLSIVLLVTQHKINQYAEDLGARGAVDPLIALWVPFLLFAALAIW HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH MYYTIAHVPGGQPIGALERVAAKGAERLRGLVRLFQRERRPG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA