Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487606

Identifier: 103487606

GI number: 103487606

Start: 2230902

End: 2231351

Strand: Direct

Name: 103487606

Synonym: Sala_2125

Alternate gene names: NA

Gene position: 2230902-2231351 (Clockwise)

Preceding gene: 103487605

Following gene: 103487607

Centisome position: 66.69

GC content: 66.67

Gene sequence:

>450_bases
TTGGCTGACGTCGCGGCGCATCCGGGCTCGCCCTGGTTGCTCGTCGGCGGCTGCCTGTCGATCATCGCCGCGCTCGCGCA
CCTCGCCTGCATTTTCGGCGGGCCCGAATGGTATCGCTTCTTCGGCGCAGGCGAAGCGATGGCGCGCGCGGCGGGGCGCG
GCGAATGGATGCCGACGCTGGTGACGCTGGGGATTGCGGCGATGTTGCTTCTCTGGGCCGCCTATGCGCTGTCGGGCGCG
GGGCTGCTGCCGCGCCTGCCGTTGCTGCGCACCGGGCTGGTCGTCATCGTCGCCATTTATTTGCTCCGCGCGCTGGCCTT
TGTGCCGCTGAACCTTGTGACGTGCCACTATTCGGACGGCTTTGCGATCGTTTCGTCGCTGATCGTGCTGATTTACGGCG
CGGTTTACGCTGTCGGCACCGCAAAAGCGTGGGACCATCTTGCACCCTGA

Upstream 100 bases:

>100_bases
CGACGACCACGACAGCCCCTTCCGCCTGATCGAACTCGCGCCGGGGGTGACGGCGGAGGACGTCGCGGCCAAGACGACGG
CGCATTATATTGGCTGAATA

Downstream 100 bases:

>100_bases
CCGGCGCCGCGGATAAGGGGCGCACACCACCCAGGCGGAGGATCATATGCGCGTTCTGCTCAGCGGATCGTCGGGATGGC
TGGGACGCCATCTGGCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MADVAAHPGSPWLLVGGCLSIIAALAHLACIFGGPEWYRFFGAGEAMARAAGRGEWMPTLVTLGIAAMLLLWAAYALSGA
GLLPRLPLLRTGLVVIVAIYLLRALAFVPLNLVTCHYSDGFAIVSSLIVLIYGAVYAVGTAKAWDHLAP

Sequences:

>Translated_149_residues
MADVAAHPGSPWLLVGGCLSIIAALAHLACIFGGPEWYRFFGAGEAMARAAGRGEWMPTLVTLGIAAMLLLWAAYALSGA
GLLPRLPLLRTGLVVIVAIYLLRALAFVPLNLVTCHYSDGFAIVSSLIVLIYGAVYAVGTAKAWDHLAP
>Mature_148_residues
ADVAAHPGSPWLLVGGCLSIIAALAHLACIFGGPEWYRFFGAGEAMARAAGRGEWMPTLVTLGIAAMLLLWAAYALSGAG
LLPRLPLLRTGLVVIVAIYLLRALAFVPLNLVTCHYSDGFAIVSSLIVLIYGAVYAVGTAKAWDHLAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15633; Mature: 15502

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADVAAHPGSPWLLVGGCLSIIAALAHLACIFGGPEWYRFFGAGEAMARAAGRGEWMPTL
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCHHHHH
VTLGIAAMLLLWAAYALSGAGLLPRLPLLRTGLVVIVAIYLLRALAFVPLNLVTCHYSDG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
FAIVSSLIVLIYGAVYAVGTAKAWDHLAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADVAAHPGSPWLLVGGCLSIIAALAHLACIFGGPEWYRFFGAGEAMARAAGRGEWMPTL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHCCCCCHHHHH
VTLGIAAMLLLWAAYALSGAGLLPRLPLLRTGLVVIVAIYLLRALAFVPLNLVTCHYSDG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC
FAIVSSLIVLIYGAVYAVGTAKAWDHLAP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA