Definition Sphingopyxis alaskensis RB2256, complete genome.
Accession NC_008048
Length 3,345,170

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The map label for this gene is 103487460

Identifier: 103487460

GI number: 103487460

Start: 2084556

End: 2084951

Strand: Direct

Name: 103487460

Synonym: Sala_1977

Alternate gene names: NA

Gene position: 2084556-2084951 (Clockwise)

Preceding gene: 103487458

Following gene: 103487461

Centisome position: 62.32

GC content: 70.2

Gene sequence:

>396_bases
ATGACCGGCAAATCCCTTTCCGAACGCATCGGCGACCTTGGCCGCCGCCTCGCGGTCGAGGCGCACACCGCCTGGCTCGC
CGCGCGCGACCCGCGCGTGGCGTGGTTCGCGCGGCTGCTGGCGGTCGCGGTCGCCGCCTATGCGCTCTCGCCGATCGACC
TCATCCCCGATTTCATCCCCGTGCTCGGCTGGATCGACGACCTCGTCATCCTGCCGCTCGGCCTGCTCGCGGTGCGGCGT
CTGATCGCCGCGCCCTTGTGGTCCGAACTCCACGCCTTGGCCGAAACGGCGAGCGAGCGGCCCTCAAGCCGGGCGGGCAT
GATCCTGATCCTGCTTATCTGGGCCGCCCTGCTCGCCATCGTCTATTGGGCGGTGCGCACCTCGCCGCTGCATTAG

Upstream 100 bases:

>100_bases
TGGCGCCGCGACTGATGACGAACGAGCCCGCGACGGGCCAGCGTTCGACGCGCGCGCTTTTCAGTTGGATAGCCATGGCT
AGACAGTAATGAGGGATGGC

Downstream 100 bases:

>100_bases
AAGCGGCGTGCTGTATATCAAATCCGCTTGCCCCGCCCTTTTCCATCCTTACATATCGGCGCACGATAATGTCTTTTCCG
GATAATGAGGATCGCCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTGKSLSERIGDLGRRLAVEAHTAWLAARDPRVAWFARLLAVAVAAYALSPIDLIPDFIPVLGWIDDLVILPLGLLAVRR
LIAAPLWSELHALAETASERPSSRAGMILILLIWAALLAIVYWAVRTSPLH

Sequences:

>Translated_131_residues
MTGKSLSERIGDLGRRLAVEAHTAWLAARDPRVAWFARLLAVAVAAYALSPIDLIPDFIPVLGWIDDLVILPLGLLAVRR
LIAAPLWSELHALAETASERPSSRAGMILILLIWAALLAIVYWAVRTSPLH
>Mature_130_residues
TGKSLSERIGDLGRRLAVEAHTAWLAARDPRVAWFARLLAVAVAAYALSPIDLIPDFIPVLGWIDDLVILPLGLLAVRRL
IAAPLWSELHALAETASERPSSRAGMILILLIWAALLAIVYWAVRTSPLH

Specific function: Unknown

COG id: COG3339

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14320; Mature: 14189

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGKSLSERIGDLGRRLAVEAHTAWLAARDPRVAWFARLLAVAVAAYALSPIDLIPDFIP
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VLGWIDDLVILPLGLLAVRRLIAAPLWSELHALAETASERPSSRAGMILILLIWAALLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VYWAVRTSPLH
HHHHHHCCCCC
>Mature Secondary Structure 
TGKSLSERIGDLGRRLAVEAHTAWLAARDPRVAWFARLLAVAVAAYALSPIDLIPDFIP
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHH
VLGWIDDLVILPLGLLAVRRLIAAPLWSELHALAETASERPSSRAGMILILLIWAALLAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VYWAVRTSPLH
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA