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The map label for this gene is cirA [C]

Identifier: 103487378

GI number: 103487378

Start: 1993256

End: 1995385

Strand: Direct

Name: cirA [C]

Synonym: Sala_1894

Alternate gene names: 103487378

Gene position: 1993256-1995385 (Clockwise)

Preceding gene: 103487347

Following gene: 103487383

Centisome position: 59.59

GC content: 67.09

Gene sequence:

>2130_bases
ATGCGCTTGCTCTCTTCCGCCGGATTCACTCTCGCGCTTGTTCTTTCAGCCCCCGCCATCGCGCAGGGTCGCACCGCGGG
CAGCGACGACGATGTGCATACCGGCGGGCCGATCATCGTCACCGCCCCCTATGTCCGCAGCCTCGACATTCTGGGCAATG
TGTCGGTGCTCGAGGGCGACGAGCTGGCGCGCGACATCCGCGGCCAGATCGGCGACAGCCTGACGCGACAGGCGGGCGTG
TCGGCGACCAGCTTCGCCCCCGGCGCCTCGCGCCCCGTGCTGCGCGGCTTTTCGGGCGAGCGCGTGCGCGTGCTGACCGA
CGGGATCGGCTCGATCGACGTGTCGAACACCTCGGCCGACCACGCCGTCACCATCGACCCGTTGACCGTCGAGCGCATCG
AGATATTGCGCGGTCCCGCGGTGCTGCTGTTCGGCAGCCAGGCGATCGGCGGCGCGGTCAACCTGTTCGACCGCCGCATC
CCCCGCAAGGTGCCCGAGGACCATGTCCATATCGACGCGATCGGCGGCTATGCGACCGCGGCCGACGACCGCAACGCCGG
TGGTTCGATTGACATCGCCCTGTCGCCGCAGGTCGTCGCGCATTTCGACGGCAGCTGGCGCAAGACCGGCGACATGCGCA
GCGGCGGCTTCGTCTATGCCCCCGGACTGCGCGCCGAACTGCTCGACCTGGCCGCCGAAGAGGCCGAAGAAGGCCATGCC
GACGAAGCGGCCGAACTCACCGAACAAGCCGGCTCGCGCGGCAAGGTCGCCAACACCGCGAGCGAGACCTGGACGGCGGC
GGGCGGTCTGTCGCTCATCAACGACGGCGGCCAGCTCGGCGTTTCGGTGAGCTATTATGACAGCAATTACGGCGTCCCGT
CGCGCCCCGGCACCGAGCACCACCACGAAGAGGGTGAAGAGGGCGAGGAAGAGGAAGGCCACGAGCCTGGCGAAGGCGCG
GTGACCATCGGCCTCAAGCAATGGCGCGCCGACCTGCGCGGCGAGGTCGAGATGGGCGACGGCTTTTTCGACAAGCTGCG
CATCCGCGCGGGCTTCGCCGATTATGAACATACCGAGTTCGAGGGCGACGAGGTCGGCACGATATTCACCAACCAGGGCG
TCGAGGGCCGGATCGAGCTGGCCCAGAACGACCGCGGCGGCTGGCGTGGCGCGAGCGGTGTGCAATATAGCCACCGCGAC
TTCAACGCGATCGGCGCCGAAGCCTTCGTCCCGCGCAATCTCACGGACCAGTTCGCGCTGTTCACCTTGCAGGAATGGCA
AACGGGTCCGCTGGGCGTCGAAGCCGCGGCGCGCTTTGAAAGCACCAGCGTCCGCGCGCCGACACTTGGCATCGAACGCG
ATTTTGATACATTTTCAGGCGCACTCGGCGCCAATTACGAGCTTGCCGAGGGTGTGAAGGTCGGCGTCTCGGTCGCGCGC
GCGGTGCGCGCGCCGTCGGCCGAGGAACTTTTCTCGAACGGCCCGCATATCGCGACGCAGGCGTTCGAAGTCGGCGATCC
GAACCTCAGGCGCGAGGCAAGCTGGGGGGCGGAGGCTTCGTTCAAGCTGAAAACCGATCGTTTCAACCTCAGCCTGGCGG
CCTATTCGAACTGGTTCGACGACTTCATCTATGCGGATGCCACCGGCGAGGAAGAGGATGAGCTTCCCGTTTTCCAGTAT
TTCCAGCGCGATGCGCGTGTCTGGGGTTTCGAGGCCGAGGCGAGCGCGCGGCTCGCACAGATCGGCGGCTTCAACATCGT
CGCCGATGCGACCGCTGATATGACGCGCGCGAAGATCAGGGGCGGGCTCGACCAGCACGCCCCGCGCATCCCGCCGCTGC
GCGTGCTCGGCGGGCTGGAAGCGCAAGGCGAGCGGATCGACGCGCGCGCCGAAGTCGAATGGACCGACGACCAGACGCGC
ATCGCGCCGTTCGAAACGCCGACCAGGGGCTTTACGCTGGTCAATGCGTCGATCAGCTGGCGTCCGCTGCCCGACAGCCG
CAACCTGACGCTCAGCCTCGCCGCGAACAATATATTCGACGTCGAGGCGCGGCGCCACGCGAGCTTCACCAAGGATTATG
TGCCGCTCGCGGGCCGCGACATCCGTTTGACGGCGCGCGCGAGCTTCTGA

Upstream 100 bases:

>100_bases
ACCAACCGCCGACGGGACGGCTGAACAGGCTTGTCATTGTGACAGTATATCATTACTGGCACTCGGCATCACCCCTAACA
GTCAGGATTATGGTCGTCCC

Downstream 100 bases:

>100_bases
TGCAACAAGGCCCCGCCCCTGTCACGGCGAGGGCGGGGCCGGGTTCAGAAAGGCAGCAGCTTGCGCTTGTTCCAGTAGAT
CGAGGTCGCCGCCGCATAGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 709; Mature: 709

Protein sequence:

>709_residues
MRLLSSAGFTLALVLSAPAIAQGRTAGSDDDVHTGGPIIVTAPYVRSLDILGNVSVLEGDELARDIRGQIGDSLTRQAGV
SATSFAPGASRPVLRGFSGERVRVLTDGIGSIDVSNTSADHAVTIDPLTVERIEILRGPAVLLFGSQAIGGAVNLFDRRI
PRKVPEDHVHIDAIGGYATAADDRNAGGSIDIALSPQVVAHFDGSWRKTGDMRSGGFVYAPGLRAELLDLAAEEAEEGHA
DEAAELTEQAGSRGKVANTASETWTAAGGLSLINDGGQLGVSVSYYDSNYGVPSRPGTEHHHEEGEEGEEEEGHEPGEGA
VTIGLKQWRADLRGEVEMGDGFFDKLRIRAGFADYEHTEFEGDEVGTIFTNQGVEGRIELAQNDRGGWRGASGVQYSHRD
FNAIGAEAFVPRNLTDQFALFTLQEWQTGPLGVEAAARFESTSVRAPTLGIERDFDTFSGALGANYELAEGVKVGVSVAR
AVRAPSAEELFSNGPHIATQAFEVGDPNLRREASWGAEASFKLKTDRFNLSLAAYSNWFDDFIYADATGEEEDELPVFQY
FQRDARVWGFEAEASARLAQIGGFNIVADATADMTRAKIRGGLDQHAPRIPPLRVLGGLEAQGERIDARAEVEWTDDQTR
IAPFETPTRGFTLVNASISWRPLPDSRNLTLSLAANNIFDVEARRHASFTKDYVPLAGRDIRLTARASF

Sequences:

>Translated_709_residues
MRLLSSAGFTLALVLSAPAIAQGRTAGSDDDVHTGGPIIVTAPYVRSLDILGNVSVLEGDELARDIRGQIGDSLTRQAGV
SATSFAPGASRPVLRGFSGERVRVLTDGIGSIDVSNTSADHAVTIDPLTVERIEILRGPAVLLFGSQAIGGAVNLFDRRI
PRKVPEDHVHIDAIGGYATAADDRNAGGSIDIALSPQVVAHFDGSWRKTGDMRSGGFVYAPGLRAELLDLAAEEAEEGHA
DEAAELTEQAGSRGKVANTASETWTAAGGLSLINDGGQLGVSVSYYDSNYGVPSRPGTEHHHEEGEEGEEEEGHEPGEGA
VTIGLKQWRADLRGEVEMGDGFFDKLRIRAGFADYEHTEFEGDEVGTIFTNQGVEGRIELAQNDRGGWRGASGVQYSHRD
FNAIGAEAFVPRNLTDQFALFTLQEWQTGPLGVEAAARFESTSVRAPTLGIERDFDTFSGALGANYELAEGVKVGVSVAR
AVRAPSAEELFSNGPHIATQAFEVGDPNLRREASWGAEASFKLKTDRFNLSLAAYSNWFDDFIYADATGEEEDELPVFQY
FQRDARVWGFEAEASARLAQIGGFNIVADATADMTRAKIRGGLDQHAPRIPPLRVLGGLEAQGERIDARAEVEWTDDQTR
IAPFETPTRGFTLVNASISWRPLPDSRNLTLSLAANNIFDVEARRHASFTKDYVPLAGRDIRLTARASF
>Mature_709_residues
MRLLSSAGFTLALVLSAPAIAQGRTAGSDDDVHTGGPIIVTAPYVRSLDILGNVSVLEGDELARDIRGQIGDSLTRQAGV
SATSFAPGASRPVLRGFSGERVRVLTDGIGSIDVSNTSADHAVTIDPLTVERIEILRGPAVLLFGSQAIGGAVNLFDRRI
PRKVPEDHVHIDAIGGYATAADDRNAGGSIDIALSPQVVAHFDGSWRKTGDMRSGGFVYAPGLRAELLDLAAEEAEEGHA
DEAAELTEQAGSRGKVANTASETWTAAGGLSLINDGGQLGVSVSYYDSNYGVPSRPGTEHHHEEGEEGEEEEGHEPGEGA
VTIGLKQWRADLRGEVEMGDGFFDKLRIRAGFADYEHTEFEGDEVGTIFTNQGVEGRIELAQNDRGGWRGASGVQYSHRD
FNAIGAEAFVPRNLTDQFALFTLQEWQTGPLGVEAAARFESTSVRAPTLGIERDFDTFSGALGANYELAEGVKVGVSVAR
AVRAPSAEELFSNGPHIATQAFEVGDPNLRREASWGAEASFKLKTDRFNLSLAAYSNWFDDFIYADATGEEEDELPVFQY
FQRDARVWGFEAEASARLAQIGGFNIVADATADMTRAKIRGGLDQHAPRIPPLRVLGGLEAQGERIDARAEVEWTDDQTR
IAPFETPTRGFTLVNASISWRPLPDSRNLTLSLAANNIFDVEARRHASFTKDYVPLAGRDIRLTARASF

Specific function: Probable receptor, tonB-dependent [H]

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 76246; Mature: 76246

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLSSAGFTLALVLSAPAIAQGRTAGSDDDVHTGGPIIVTAPYVRSLDILGNVSVLEGD
CCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCEEEECCCHHEEHHHCCCEEECCH
ELARDIRGQIGDSLTRQAGVSATSFAPGASRPVLRGFSGERVRVLTDGIGSIDVSNTSAD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEECCCCCC
HAVTIDPLTVERIEILRGPAVLLFGSQAIGGAVNLFDRRIPRKVPEDHVHIDAIGGYATA
CEEEECCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEC
ADDRNAGGSIDIALSPQVVAHFDGSWRKTGDMRSGGFVYAPGLRAELLDLAAEEAEEGHA
CCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCC
DEAAELTEQAGSRGKVANTASETWTAAGGLSLINDGGQLGVSVSYYDSNYGVPSRPGTEH
HHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCC
HHEEGEEGEEEEGHEPGEGAVTIGLKQWRADLRGEVEMGDGFFDKLRIRAGFADYEHTEF
CCCCCCCCCHHCCCCCCCCEEEEEHHHHHHHCCCEEECCCCHHHEEEEEECCCCCCCCCC
EGDEVGTIFTNQGVEGRIELAQNDRGGWRGASGVQYSHRDFNAIGAEAFVPRNLTDQFAL
CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEE
FTLQEWQTGPLGVEAAARFESTSVRAPTLGIERDFDTFSGALGANYELAEGVKVGVSVAR
EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCHHHHHHHHH
AVRAPSAEELFSNGPHIATQAFEVGDPNLRREASWGAEASFKLKTDRFNLSLAAYSNWFD
HHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECEEEEEEEHHHHHHH
DFIYADATGEEEDELPVFQYFQRDARVWGFEAEASARLAQIGGFNIVADATADMTRAKIR
HEEEECCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEECCCHHHHHHHHH
GGLDQHAPRIPPLRVLGGLEAQGERIDARAEVEWTDDQTRIAPFETPTRGFTLVNASISW
CCHHHCCCCCCCHHHHCCCCCCCCEECCEEEEEECCCCCEECCCCCCCCCEEEEEEEEEE
RPLPDSRNLTLSLAANNIFDVEARRHASFTKDYVPLAGRDIRLTARASF
EECCCCCCEEEEEECCCEEEECHHHHCCCCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MRLLSSAGFTLALVLSAPAIAQGRTAGSDDDVHTGGPIIVTAPYVRSLDILGNVSVLEGD
CCCCCCCCCEEEEEECCCCHHCCCCCCCCCCCCCCCCEEEECCCHHEEHHHCCCEEECCH
ELARDIRGQIGDSLTRQAGVSATSFAPGASRPVLRGFSGERVRVLTDGIGSIDVSNTSAD
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCEEEECCCCCC
HAVTIDPLTVERIEILRGPAVLLFGSQAIGGAVNLFDRRIPRKVPEDHVHIDAIGGYATA
CEEEECCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCEEEC
ADDRNAGGSIDIALSPQVVAHFDGSWRKTGDMRSGGFVYAPGLRAELLDLAAEEAEEGHA
CCCCCCCCEEEEEECCEEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCC
DEAAELTEQAGSRGKVANTASETWTAAGGLSLINDGGQLGVSVSYYDSNYGVPSRPGTEH
HHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCC
HHEEGEEGEEEEGHEPGEGAVTIGLKQWRADLRGEVEMGDGFFDKLRIRAGFADYEHTEF
CCCCCCCCCHHCCCCCCCCEEEEEHHHHHHHCCCEEECCCCHHHEEEEEECCCCCCCCCC
EGDEVGTIFTNQGVEGRIELAQNDRGGWRGASGVQYSHRDFNAIGAEAFVPRNLTDQFAL
CCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEE
FTLQEWQTGPLGVEAAARFESTSVRAPTLGIERDFDTFSGALGANYELAEGVKVGVSVAR
EEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCHHHHHHHHH
AVRAPSAEELFSNGPHIATQAFEVGDPNLRREASWGAEASFKLKTDRFNLSLAAYSNWFD
HHCCCCHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEECEEEEEEEHHHHHHH
DFIYADATGEEEDELPVFQYFQRDARVWGFEAEASARLAQIGGFNIVADATADMTRAKIR
HEEEECCCCCCCCCCHHHHHHHHCCCEEEECCHHHHHHHHCCCCEEEECCCHHHHHHHHH
GGLDQHAPRIPPLRVLGGLEAQGERIDARAEVEWTDDQTRIAPFETPTRGFTLVNASISW
CCHHHCCCCCCCHHHHCCCCCCCCEECCEEEEEECCCCCEECCCCCCCCCEEEEEEEEEE
RPLPDSRNLTLSLAANNIFDVEARRHASFTKDYVPLAGRDIRLTARASF
EECCCCCCEEEEEECCCEEEECHHHHCCCCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]